Consensus transcriptional regulatory networks of coronavirus-infected human cells
Published 2020 View Full Article
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Title
Consensus transcriptional regulatory networks of coronavirus-infected human cells
Authors
Keywords
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Journal
Scientific Data
Volume 7, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-09-22
DOI
10.1038/s41597-020-00628-6
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Note: Only part of the references are listed.- A pneumonia outbreak associated with a new coronavirus of probable bat origin
- (2020) Peng Zhou et al. NATURE
- Editorial: low population mortality from COVID-19 in countries south of latitude 35 degrees North supports vitamin D as a factor determining severity
- (2020) Jonathan M. Rhodes et al. ALIMENTARY PHARMACOLOGY & THERAPEUTICS
- COVID-19 in the heart and the lungs: could we “Notch” the inflammatory storm?
- (2020) Paola Rizzo et al. BASIC RESEARCH IN CARDIOLOGY
- Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19
- (2020) Daniel Blanco-Melo et al. CELL
- SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues
- (2020) Carly G.K. Ziegler et al. CELL
- SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor
- (2020) Markus Hoffmann et al. CELL
- Detectable serum SARS-CoV-2 viral load (RNAaemia) is closely correlated with drastically elevated interleukin 6 (IL-6) level in critically ill COVID-19 patients
- (2020) Xiaohua Chen et al. CLINICAL INFECTIOUS DISEASES
- The pivotal link between ACE2 deficiency and SARS-CoV-2 infection
- (2020) Paolo Verdecchia et al. European Journal of Internal Medicine
- Trials of anti-tumour necrosis factor therapy for COVID-19 are urgently needed
- (2020) Marc Feldmann et al. LANCET
- A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
- (2020) David E. Gordon et al. NATURE
- SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
- (2020) Waradon Sungnak et al. NATURE MEDICINE
- Universal Screening for SARS-CoV-2 in Women Admitted for Delivery
- (2020) Desmond Sutton et al. NEW ENGLAND JOURNAL OF MEDICINE
- SARS-CoV-2 productively infects human gut enterocytes
- (2020) Mart M. Lamers et al. SCIENCE
- Pulmonary fibrosis and COVID-19: the potential role for antifibrotic therapy
- (2020) Peter M George et al. Lancet Respiratory Medicine
- The Global Phosphorylation Landscape of SARS-CoV-2 Infection
- (2020) Mehdi Bouhaddou et al. CELL
- Coronavirus breakthrough: dexamethasone is first drug shown to save lives
- (2020) Heidi Ledford NATURE
- Multiomics Investigation Revealing the Characteristics of HIV-1-Infected Cells In Vivo
- (2020) Hirofumi Aso et al. Cell Reports
- The glucocorticoid receptor (GR) stimulates Herpes Simplex Virus 1 productive infection, in part because the infected cell protein 0 (ICP0) promoter is cooperatively transactivated by the GR and Kruüppel-like transcription factor 15
- (2019) Jeffery B. Ostler et al. JOURNAL OF VIROLOGY
- The Molecular Basis of Viral Inhibition of IRF- and STAT-Dependent Immune Responses
- (2019) Hao-Sen Chiang et al. Frontiers in Immunology
- A dual controllability analysis of influenza virus-host protein-protein interaction networks for antiviral drug target discovery
- (2019) Emily E. Ackerman et al. BMC BIOINFORMATICS
- The Signaling Pathways Project, an integrated ‘omics knowledgebase for mammalian cellular signaling pathways
- (2019) Scott A. Ochsner et al. Scientific Data
- CD147 Induces Epithelial-to-Mesenchymal Transition by Disassembling Cellular Apoptosis Susceptibility Protein/E-Cadherin/β-Catenin Complex in Human Endometriosis
- (2018) Chaoqun Wang et al. AMERICAN JOURNAL OF PATHOLOGY
- The Role of ADAR1 and ADAR2 in the Regulation of miRNA-21 in Idiopathic Pulmonary Fibrosis
- (2018) Gabriela Díaz-Piña et al. LUNG
- Transcription factor compensation during mammary gland development in E2F knockout mice
- (2018) Briana To et al. PLoS One
- Cyclin-dependent kinase activity is required for type I interferon production
- (2018) Oya Cingöz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Viral targeting of TFIIB impairs de novo polymerase II recruitment and affects antiviral immunity
- (2018) Darya A. Haas et al. PLoS Pathogens
- Inflammatory and Fibrinolytic System in Acute Respiratory Distress Syndrome
- (2018) Mahesh Manjunath Gouda et al. LUNG
- ChIP‐Atlas: a data‐mining suite powered by full integration of public ChIP‐seq data
- (2018) Shinya Oki et al. EMBO REPORTS
- Breaking Bad: How Viruses Subvert the Cell Cycle
- (2018) Ying Fan et al. Frontiers in Cellular and Infection Microbiology
- The interferon-inducible isoform of NCOA7 inhibits endosome-mediated viral entry
- (2018) Tomas Doyle et al. Nature Microbiology
- Persistent Transmissible Gastroenteritis Virus Infection Enhances Enterotoxigenic Escherichia coli K88 Adhesion by Promoting Epithelial-Mesenchymal Transition in Intestinal Epithelial Cells
- (2017) Lu Xia et al. JOURNAL OF VIROLOGY
- Identification and validation of differentially expressed transcripts by RNA-sequencing of formalin-fixed, paraffin-embedded (FFPE) lung tissue from patients with Idiopathic Pulmonary Fibrosis
- (2017) Milica Vukmirovic et al. BMC Pulmonary Medicine
- The NF-κB-dependent and -independent transcriptome and chromatin landscapes of human coronavirus 229E-infected cells
- (2017) Michael Poppe et al. PLoS Pathogens
- A Review of Pathway-Based Analysis Tools That Visualize Genetic Variants
- (2017) Elisa Cirillo et al. Frontiers in Genetics
- P-TEFb goes viral
- (2016) Justyna Zaborowska et al. BIOESSAYS
- The unique role of STAT2 in constitutive and IFN-induced transcription and antiviral responses
- (2016) Katarzyna Blaszczyk et al. CYTOKINE & GROWTH FACTOR REVIEWS
- HIF-2α promotes epithelial-mesenchymal transition through regulating Twist2 binding to the promoter of E-cadherin in pancreatic cancer
- (2016) Jian Yang et al. JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH
- RRIDs: A Simple Step toward Improving Reproducibility through Rigor and Transparency of Experimental Methods
- (2016) Anita E. Bandrowski et al. NEURON
- limma powers differential expression analyses for RNA-sequencing and microarray studies
- (2015) Matthew E. Ritchie et al. NUCLEIC ACIDS RESEARCH
- The NIDDK Information Network: A Community Portal for Finding Data, Materials, and Tools for Researchers Studying Diabetes, Digestive, and Kidney Diseases
- (2015) Patricia L. Whetzel et al. PLoS One
- A draft network of ligand–receptor-mediated multicellular signalling in human
- (2015) Jordan A. Ramilowski et al. Nature Communications
- dbEMT: an epithelial-mesenchymal transition associated gene resource
- (2015) Min Zhao et al. Scientific Reports
- Interferon-Stimulated Genes: A Complex Web of Host Defenses
- (2014) William M. Schneider et al. Annual Review of Immunology
- Increased expression of RRM2 by human papillomavirus E7 oncoprotein promotes angiogenesis in cervical cancer
- (2014) N Wang et al. BRITISH JOURNAL OF CANCER
- Xenobiotic Pregnane X Receptor (PXR) Regulates Innate Immunity via Activation of NLRP3 Inflammasome in Vascular Endothelial Cells
- (2014) Shaolan Wang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Cell Cycle Control and HIV-1 Susceptibility Are Linked by CDK6-Dependent CDK2 Phosphorylation of SAMHD1 in Myeloid and Lymphoid Cells
- (2014) Eduardo Pauls et al. JOURNAL OF IMMUNOLOGY
- Molecular mechanisms of epithelial–mesenchymal transition
- (2014) Samy Lamouille et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Viruses exploit the function of epidermal growth factor receptor
- (2014) Kai Zheng et al. REVIEWS IN MEDICAL VIROLOGY
- SUMO1 modification stabilizes CDK6 protein and drives the cell cycle and glioblastoma progression
- (2014) Anita C. Bellail et al. Nature Communications
- A new paradigm for transcription factor TFIIB functionality
- (2014) Vladimir Gelev et al. Scientific Reports
- Alveolar epithelial cells undergo epithelial-mesenchymal transition in acute interstitial pneumonia: a case report
- (2014) Hongbo Li et al. BMC Pulmonary Medicine
- voom: precision weights unlock linear model analysis tools for RNA-seq read counts
- (2014) Charity W Law et al. GENOME BIOLOGY
- A comprehensive collection of systems biology data characterizing the host response to viral infection
- (2014) Brian D. Aevermann et al. Scientific Data
- The transcription factor LEF-1 induces an epithelial–mesenchymal transition in MDCK cells independent of β-catenin
- (2013) Wakako Kobayashi et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- DNA Topoisomerase 1 Facilitates the Transcription and Replication of the Ebola Virus Genome
- (2013) K. Takahashi et al. JOURNAL OF VIROLOGY
- Release of Severe Acute Respiratory Syndrome Coronavirus Nuclear Import Block Enhances Host Transcription in Human Lung Cells
- (2013) A. C. Sims et al. JOURNAL OF VIROLOGY
- Viral Infection Increases Glucocorticoid-Induced Interleukin-10 Production through ERK-Mediated Phosphorylation of the Glucocorticoid Receptor in Dendritic Cells: Potential Clinical Implications
- (2013) Sinnie Sin Man Ng et al. PLoS One
- A Network Integration Approach to Predict Conserved Regulators Related to Pathogenicity of Influenza and SARS-CoV Respiratory Viruses
- (2013) Hugh D. Mitchell et al. PLoS One
- Cell Host Response to Infection with Novel Human Coronavirus EMC Predicts Potential Antivirals and Important Differences with SARS Coronavirus
- (2013) L. Josset et al. mBio
- The NS1 Protein of Influenza A Virus Blocks RIG-I-Mediated Activation of the Noncanonical NF-κB Pathway and p52/RelB-Dependent Gene Expression in Lung Epithelial Cells
- (2012) Andrea Rückle et al. JOURNAL OF VIROLOGY
- Cyclin-dependent kinase 1 (Cdk1) is essential for cell division and suppression of DNA re-replication but not for liver regeneration
- (2012) M. K. Diril et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interferons and progesterone for establishment and maintenance of pregnancy: interactions among novel cell signaling pathways
- (2012) Fuller W. Bazer et al. Reproductive Biology
- Basigin/CD147 Promotes Renal Fibrosis after Unilateral Ureteral Obstruction
- (2011) Noritoshi Kato et al. AMERICAN JOURNAL OF PATHOLOGY
- Toll-like Receptor-4 (TLR4) Down-regulates MicroRNA-107, Increasing Macrophage Adhesion via Cyclin-dependent Kinase 6
- (2011) Elizabeth J. Hennessy et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Angiotensin II as a Morphogenic Cytokine Stimulating Renal Fibrogenesis
- (2011) C. Ruster et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- The Critical Role of Notch Ligand Delta-like 1 in the Pathogenesis of Influenza A Virus (H1N1) Infection
- (2011) Toshihiro Ito et al. PLoS Pathogens
- Severe Acute Respiratory Syndrome Coronavirus Envelope Protein Regulates Cell Stress Response and Apoptosis
- (2011) Marta L. DeDiego et al. PLoS Pathogens
- E2F3a Is Critically Involved in Epidermal Growth Factor Receptor–Directed Proliferation in Ovarian Cancer
- (2010) Daniel Reimer et al. CANCER RESEARCH
- Pandemic 2009 Influenza A(H1N1) Virus Illness Among Pregnant Women in the United States
- (2010) Alicia M. Siston JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- NuSAP is essential for chromatin-induced spindle formation during early embryogenesis
- (2010) A. Vanden Bosch et al. JOURNAL OF CELL SCIENCE
- Dynamic Innate Immune Responses of Human Bronchial Epithelial Cells to Severe Acute Respiratory Syndrome-Associated Coronavirus Infection
- (2010) Tomoki Yoshikawa et al. PLoS One
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- TGF-β-induced epithelial to mesenchymal transition
- (2009) Jian Xu et al. CELL RESEARCH
- A partial form of recessive STAT1 deficiency in humans
- (2009) Ariane Chapgier et al. JOURNAL OF CLINICAL INVESTIGATION
- Extracellular Superoxide Dismutase in Pulmonary Fibrosis
- (2007) Fei Gao et al. ANTIOXIDANTS & REDOX SIGNALING
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