Identification and distribution of the NBS-LRR gene family in the Cassava genome
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Identification and distribution of the NBS-LRR gene family in the Cassava genome
Authors
Keywords
Nucleotide Binding Site, Cassava Mosaic Disease, Cassava Brown Streak Disease, Cassava Genome, Nucleotide Binding Site Domain
Journal
BMC GENOMICS
Volume 16, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-05-06
DOI
10.1186/s12864-015-1554-9
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- RNAseq analysis of cassava reveals similar plant responses upon infection with pathogenic and non-pathogenic strains of Xanthomonas axonopodis pv. manihotis
- (2014) Alejandra Muñoz-Bodnar et al. PLANT CELL REPORTS
- Characterization of Resistance Gene Analogues (RGAs) in Apple (Malus × domestica Borkh.) and Their Evolutionary History of the Rosaceae Family
- (2014) Michele Perazzolli et al. PLoS One
- Transcriptional Response of Virus-Infected Cassava and Identification of Putative Sources of Resistance for Cassava Brown Streak Disease
- (2014) M. N. Maruthi et al. PLoS One
- High-resolution mapping of resistance to cassava mosaic geminiviruses in cassava using genotyping-by-sequencing and its implications for breeding
- (2014) Ismail Y. Rabbi et al. VIRUS RESEARCH
- Cassava genome from a wild ancestor to cultivated varieties
- (2014) Wenquan Wang et al. Nature Communications
- Plant Nucleotide Binding Site–Leucine-Rich Repeat (NBS-LRR) Genes: Active Guardians in Host Defense Responses
- (2013) Daniela Marone et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome-wide identification and analysis of candidate genes for disease resistance in tomato
- (2013) G. Andolfo et al. MOLECULAR BREEDING
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations
- (2013) Florian Jupe et al. PLANT JOURNAL
- Identification and localisation of the NB-LRR gene family within the potato genome
- (2012) Florian Jupe et al. BMC GENOMICS
- Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean
- (2012) Yang Kang et al. BMC PLANT BIOLOGY
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Dynamic Nucleotide-Binding Site and Leucine-Rich Repeat-Encoding Genes in the Grass Family
- (2012) S. Luo et al. PLANT PHYSIOLOGY
- Deconstruction of the (Paleo)Polyploid Grapevine Genome Based on the Analysis of Transposition Events Involving NBS Resistance Genes
- (2012) Giulia Malacarne et al. PLoS One
- Genome-Wide Identification and Mapping of NBS-Encoding Resistance Genes in Solanum tuberosum Group Phureja
- (2012) Roberto Lozano et al. PLoS One
- The Cassava Genome: Current Progress, Future Directions
- (2012) Simon Prochnik et al. Tropical Plant Biology
- Perspectives of genomic diversification and molecular recombination towards R-gene evolution in plants
- (2012) Raj Kumar Joshi et al. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS
- Differential expression in RNA-seq: A matter of depth
- (2011) S. Tarazona et al. GENOME RESEARCH
- Cell Death Mediated by the N-Terminal Domains of a Unique and Highly Conserved Class of NB-LRR Protein
- (2011) Sarah M. Collier et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Phytozome: a comparative platform for green plant genomics
- (2011) David M. Goodstein et al. NUCLEIC ACIDS RESEARCH
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Genome-Wide Comparison of Nucleotide-Binding Site-Leucine-Rich Repeat-Encoding Genes in Arabidopsis
- (2011) Y.-L. Guo et al. PLANT PHYSIOLOGY
- Alternative splicing: Enhancing ability to cope with stress via transcriptome plasticity
- (2011) Anna M. Mastrangelo et al. PLANT SCIENCE
- A molecular evolutionary concept connecting nonhost resistance, pathogen host range, and pathogen speciation
- (2011) Paul Schulze-Lefert et al. TRENDS IN PLANT SCIENCE
- Comparing the regional epidemiology of the cassava mosaic and cassava brown streak virus pandemics in Africa
- (2011) J.P. Legg et al. VIRUS RESEARCH
- Differential interaction between cassava mosaic geminiviruses and geminivirus satellites
- (2010) B. L. Patil et al. JOURNAL OF GENERAL VIROLOGY
- Unique evolutionary pattern of numbers of gramineous NBS–LRR genes
- (2010) Jing Li et al. MOLECULAR GENETICS AND GENOMICS
- CDD: a Conserved Domain Database for the functional annotation of proteins
- (2010) A. Marchler-Bauer et al. NUCLEIC ACIDS RESEARCH
- DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
- (2009) Likun Wang et al. BIOINFORMATICS
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Molecular characterisation and genetic mapping of candidate genes for qualitative disease resistance in perennial ryegrass (Lolium perenne L.)
- (2009) Peter M Dracatos et al. BMC PLANT BIOLOGY
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Strong Positive Selection Drives Rapid Diversification of R-Genes in Arabidopsis Relatives
- (2009) Qihan Chen et al. JOURNAL OF MOLECULAR EVOLUTION
- Genome-wide analysis of Carica papaya reveals a small NBS resistance gene family
- (2009) Brad W. Porter et al. MOLECULAR GENETICS AND GENOMICS
- Genome-wide identification of NBS-encoding resistance genes in Brassica rapa
- (2009) Jeong-Hwan Mun et al. MOLECULAR GENETICS AND GENOMICS
- The Sorghum bicolor genome and the diversification of grasses
- (2009) Andrew H. Paterson et al. NATURE
- NB-LRRs work a “bait and switch” on pathogens
- (2009) Sarah M. Collier et al. TRENDS IN PLANT SCIENCE
- Recent duplications dominate NBS-encoding gene expansion in two woody species
- (2008) Sihai Yang et al. MOLECULAR GENETICS AND GENOMICS
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started