Transcriptional Response of Virus-Infected Cassava and Identification of Putative Sources of Resistance for Cassava Brown Streak Disease

High throughput real-time RT-PCR assays for specific detection of cassava brown streak disease causal viruses, and their application to testing of planting material

(2012) I. P. Adams et al.   PLANT PATHOLOGY

Exploiting the Combination of Natural and Genetically Engineered Resistance to Cassava Mosaic and Cassava Brown Streak Viruses Impacting Cassava Production in Africa

(2012) Hervé Vanderschuren et al.   PLoS One

Multiplex RT-PCR assays for the simultaneous detection of both RNA and DNA viruses infecting cassava and the common occurrence of mixed infections by two cassava brown streak viruses in East Africa

(2011) M.M. Abarshi et al.   JOURNAL OF VIROLOGICAL METHODS

RNAi-mediated resistance to Cassava brown streak Uganda virus in transgenic cassava

(2011) JITENDER S. YADAV et al.   MOLECULAR PLANT PATHOLOGY

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava

(2011) Morag E. Ferguson et al.   THEORETICAL AND APPLIED GENETICS

Comparing the regional epidemiology of the cassava mosaic and cassava brown streak virus pandemics in Africa

(2011) J.P. Legg et al.   VIRUS RESEARCH

The complete genome sequence of the Tanzanian strain of Cassava brown streak virus and comparison with the Ugandan strain sequence

(2010) Wendy A. Monger et al.   ARCHIVES OF VIROLOGY

Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa

(2010) S. Winter et al.   JOURNAL OF GENERAL VIROLOGY

Characterization of Transcriptional Complexity during Berry Development in Vitis vinifera Using RNA-Seq

(2010) S. Zenoni et al.   PLANT PHYSIOLOGY

Genetically distinct strains of Cassava brown streak virus in the Lake Victoria basin and the Indian Ocean coastal area of East Africa

(2009) D. R. Mbanzibwa et al.   ARCHIVES OF VIROLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Optimization of diagnostic RT-PCR protocols and sampling procedures for the reliable and cost-effective detection of Cassava brown streak virus

(2009) M.M. Abarshi et al.   JOURNAL OF VIROLOGICAL METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH