Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations

Targeted enrichment strategies for next-generation plant biology

(2012) Richard Cronn et al.   AMERICAN JOURNAL OF BOTANY

Late blight resistance gene from Solanum ruiz-ceballosii is located on potato chromosome X and linked to violet flower colour

(2012) Jadwiga Śliwka et al.   BMC GENETICS

Identification and localisation of the NB-LRR gene family within the potato genome

(2012) Florian Jupe et al.   BMC GENOMICS

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Big data in small places

(2012) Daniel MacLean et al.   NATURE BIOTECHNOLOGY

A beginner's guide to eukaryotic genome annotation

(2012) Mark Yandell et al.   NATURE REVIEWS GENETICS

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals importantSolanumR locus dynamics

(2012) G. Andolfo et al.   NEW PHYTOLOGIST

Savant Genome Browser 2: visualization and analysis for population-scale genomics

(2012) M. Fiume et al.   NUCLEIC ACIDS RESEARCH

Genome-Wide Identification and Mapping of NBS-Encoding Resistance Genes in Solanum tuberosum Group Phureja

(2012) Roberto Lozano et al.   PLoS One

Community gene annotation in practice

(2012) J. E. Loveland et al.   Database-The Journal of Biological Databases and Curation

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

A genome-wide genetic map of NB-LRR disease resistance loci in potato

(2011) Erin Bakker et al.   THEORETICAL AND APPLIED GENETICS

A molecular evolutionary concept connecting nonhost resistance, pathogen host range, and pathogen speciation

(2011) Paul Schulze-Lefert et al.   TRENDS IN PLANT SCIENCE

A comparative analysis of exome capture

(2011) Jennifer S Parla et al.   GENOME BIOLOGY

Variation in crossover rates across a 3-Mb contig of bread wheat (Triticum aestivum) reveals the presence of a meiotic recombination hotspot

(2010) Cyrille Saintenac et al.   CHROMOSOMA

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

Isolation and Characteristics of the CN Gene, a Tobacco Mosaic Virus Resistance N Gene Homolog, from Tobacco

(2009) Gai-Yun Zhang et al.   BIOCHEMICAL GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

Two distinct potato late blight resistance genes from Solanum berthaultii are located on chromosome 10

(2008) Tae-Ho Park et al.   EUPHYTICA

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH