Biodiversity and Community Structure of Mesozooplankton in the Marine and Coastal National Park Areas of Korea

Pretreatment Method for DNA Barcoding to Analyze Gut Contents of Rotifers

(2020) Hye-Ji Oh et al.   Applied Sciences-Basel

Assessing eukaryotic biodiversity in the Florida Keys National Marine Sanctuary through environmental DNA metabarcoding

(2019) Natalie A. Sawaya et al.   Ecology and Evolution

Trends in DNA barcoding and metabarcoding

(2019) Sarah J. Adamowicz et al.   GENOME

Comparison of DNA metabarcoding and morphological identification for stream macroinvertebrate biodiversity assessment and monitoring

(2019) Joeselle M. Serrana et al.   ECOLOGICAL INDICATORS

Comparison of Water Sampling between Environmental DNA Metabarcoding and Conventional Microscopic Identification: A Case Study in Gwangyang Bay, South Korea

(2019) Kim et al.   Applied Sciences-Basel

Evaluation of marine zooplankton community structure through environmental DNA metabarcoding

(2018) Anni Djurhuus et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

eDNA metabarcoding as a new surveillance approach for coastal Arctic biodiversity

(2018) Anaïs Lacoursière-Roussel et al.   Ecology and Evolution

Multi-marker metabarcoding approach to study mesozooplankton at basin scale

(2018) Sergio Stefanni et al.   Scientific Reports

How quantitative is metabarcoding: A meta‐analytical approach

(2018) Philip D. Lamb et al.   MOLECULAR ECOLOGY

18S V9 metabarcoding correctly depicts plankton estuarine community drivers

(2017) D Abad et al.   MARINE ECOLOGY PROGRESS SERIES

Diet composition and feeding habits of larval Pacific bluefin tuna Thunnus orientalis in the Sea of Japan: integrated morphological and metagenetic analysis

(2017) T Kodama et al.   MARINE ECOLOGY PROGRESS SERIES

DNA metabarcoding of unfractionated water samples relates phyto-, zoo- and bacterioplankton dynamics and reveals a single-taxon bacterial bloom

(2017) Christian Wurzbacher et al.   Environmental Microbiology Reports

18S V9 metabarcoding correctly depicts plankton estuarine community drivers

(2017) D Abad et al.   MARINE ECOLOGY PROGRESS SERIES

Diet composition and feeding habits of larval Pacific bluefin tuna Thunnus orientalis in the Sea of Japan: integrated morphological and metagenetic analysis

(2017) T Kodama et al.   MARINE ECOLOGY PROGRESS SERIES

Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding

(2017) Elizabeth A. Andruszkiewicz et al.   PLoS One

DNA in a bottle—Rapid metabarcoding survey for early alerts of invasive species in ports

(2017) Yaisel J. Borrell et al.   PLoS One

The effects of parameter choice on defining molecular operational taxonomic units and resulting ecological analyses of metabarcoding data

(2016) Elizabeth L. Clare et al.   GENOME

Ecological differentiation in cryptic rotifer species: what we can learn from the Brachionus plicatilis complex

(2016) Carmen Gabaldón et al.   HYDROBIOLOGIA

Metabarcoding of marine zooplankton: prospects, progress and pitfalls

(2016) Ann Bucklin et al.   JOURNAL OF PLANKTON RESEARCH

A comparison of DNA extraction methods for high-throughput DNA analyses

(2016) Lauren M. Schiebelhut et al.   Molecular Ecology Resources

Seasonal circulation patterns of the Yellow and East China Seas derived from satellite-tracked drifter trajectories and hydrographic observations

(2016) Heung-Jae Lie et al.   PROGRESS IN OCEANOGRAPHY

18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species

(2016) Aitor Albaina et al.   Ecology and Evolution

Bioindicators: the natural indicator of environmental pollution

(2016) Trishala K. Parmar et al.   Frontiers in Life Science

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

The effect of salinity levels on the structure of zooplankton communities

(2015) Ewa Paturej et al.   Archives of Biological Sciences

Zooplankton community structure in the Yellow Sea and East China Sea in autumn

(2015) Hongju Chen et al.   BRAZILIAN JOURNAL OF OCEANOGRAPHY

An Improved DNA Extraction Method for Efficient and Quantitative Recovery of Phytoplankton Diversity in Natural Assemblages

(2015) Jian Yuan et al.   PLoS One

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities

(2015) Dominique A. Cowart et al.   PLoS One

Taxonomic Resolutions Based on 18S rRNA Genes: A Case Study of Subclass Copepoda

(2015) Shu Wu et al.   PLoS One

Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies

(2014) Jonas Zimmermann et al.   Molecular Ecology Resources

Correction: A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

(2014) Linda A. Amaral-Zettler et al.   PLoS One

Long-term variability of the siphonophores Muggiaea atlantica and M. kochi in the Western English Channel

(2014) Michael Blackett et al.   PROGRESS IN OCEANOGRAPHY

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Diversity and distribution of the Siphonophora (Cnidaria) in Sagami Bay, Japan, and their association with tropical and subarctic water masses

(2013) Mary M. Grossmann et al.   JOURNAL OF OCEANOGRAPHY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Evaluating Detection Limits of Next-Generation Sequencing for the Surveillance and Monitoring of International Marine Pests

(2013) Xavier Pochon et al.   PLoS One

Real-time monitoring of water quality using fish and crayfish as bio-indicators: a review

(2012) Iryna Kuklina et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

A size-structured food-web model for the global ocean

(2012) B. A. Ward et al.   LIMNOLOGY AND OCEANOGRAPHY

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Spatial and temporal variations of macro- and mesozooplankton community in the Huanghai Sea (Yellow Sea) and East China Sea in summer and winter

(2011) Hongju Chen et al.   ACTA OCEANOLOGICA SINICA

Life history and population dynamics of the marine cladoceran Pleopis polyphemoides (Leuckart) (Cladocera, Crustacea) in a shallow temperate Parnu Bay (Baltic Sea)

(2010) M. Pollupuu et al.   JOURNAL OF PLANKTON RESEARCH

Using DNA barcoding and phylogenetics to identify Antarctic invertebrate larvae: Lessons from a large scale study

(2010) Dorothea Heimeier et al.   Marine Genomics

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Spring dominant copepods and their distribution pattern in the yellow sea

(2009) Jung-Hoon Kang et al.   Ocean Science Journal

The relation between distribution of zooplankton and salinity in the Changjiang Estuary

(2008) Qian Gao et al.   CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY

Spatial distribution of chaetognaths off the northern Bicol Shelf, Philippines (Pacific coast)

(2008) M. M. P. Noblezada et al.   ICES JOURNAL OF MARINE SCIENCE

In hot water: zooplankton and climate change

(2008) A. J. Richardson   ICES JOURNAL OF MARINE SCIENCE

Plankton community as an indicator of water quality in tropical shrimp culture ponds

(2008) Maristela Casé et al.   MARINE POLLUTION BULLETIN