eDNA metabarcoding as a new surveillance approach for coastal Arctic biodiversity

Barcode-based species delimitation in the marine realm: a test using Hexanauplia (Multicrustacea: Thecostraca and Copepoda)

(2017) Robert G. Young et al.   GENOME

The importance of molecular markers and primer design when characterizing biodiversity from environmental DNA

(2017) Joanna R. Freeland   GENOME

Environmental DNA metabarcoding: Transforming how we survey animal and plant communities

(2017) Kristy Deiner et al.   MOLECULAR ECOLOGY

Spatial distribution of environmental DNA in a nearshore marine habitat

(2017) James L. O’Donnell et al.   PeerJ

Metabarcoding reveals strong spatial structure and temporal turnover of zooplankton communities among marine and freshwater ports

(2016) Frédéric J. J. Chain et al.   DIVERSITY AND DISTRIBUTIONS

Quantification of Environmental DNA (eDNA) Shedding and Decay Rates for Three Marine Fish

(2016) Lauren M. Sassoubre et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Quantifying relative fish abundance with eDNA: a promising tool for fisheries management

(2016) Anaïs Lacoursière-Roussel et al.   JOURNAL OF APPLIED ECOLOGY

A new species and four new records of sedentary polychaetes from the Canadian High Arctic

(2016) Eduardo López et al.   JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM

Estimating fish abundance and biomass from eDNA concentrations: variability among capture methods and environmental conditions

(2016) Anaïs Lacoursière-Roussel et al.   Molecular Ecology Resources

Commercial shipping in the Arctic: new perspectives, challenges and regulations

(2016) Emmanuel Guy et al.   POLAR RECORD

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Next-generation freshwater bioassessment: eDNA metabarcoding with a conserved metazoan primer reveals species-rich and reservoir-specific communities

(2016) Nicholas K. M. Lim et al.   Royal Society Open Science

A quantitative assessment of Arctic shipping in 2010–2014

(2016) Victor M. Eguíluz et al.   Scientific Reports

Quantitative evaluation of bias in PCR amplification and next-generation sequencing derived from metabarcoding samples

(2015) Marta Pawluczyk et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Regional Variability of Megabenthic Community Structure across the Canadian Arctic

(2015) Virginie Roy et al.   ARCTIC

Fish environmental DNA is more concentrated in aquatic sediments than surface water

(2015) Cameron R. Turner et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Relative importance of vessel hull fouling and ballast water as transport vectors of nonindigenous species to the Canadian Arctic

(2015) Farrah T. Chan et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

The ecology of environmental DNA and implications for conservation genetics

(2015) Matthew A. Barnes et al.   CONSERVATION GENETICS

Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA

(2015) Jesse A. Port et al.   MOLECULAR ECOLOGY

Long duration, room temperature preservation of filtered eDNA samples

(2015) Benjamin J. Wegleitner et al.   Conservation Genetics Resources

Swarm v2: highly-scalable and high-resolution amplicon clustering

(2015) Frédéric Mahé et al.   PeerJ

Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol

(2015) Vasco Elbrecht et al.   PLoS One

Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

(2015) Shadi Shokralla et al.   Scientific Reports

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

(2014) B. E. Deagle et al.   Biology Letters

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

(2014) Matthew A. Barnes et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams

(2014) Stephen F. Jane et al.   Molecular Ecology Resources

The room temperature preservation of filtered environmental DNA samples and assimilation into a phenol-chloroform-isoamyl alcohol DNA extraction

(2014) Mark A. Renshaw et al.   Molecular Ecology Resources

Transport Distance of Invertebrate Environmental DNA in a Natural River

(2014) Kristy Deiner et al.   PLoS One

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

(2014) J. Gibson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arctic shipping and marine invaders

(2014) A. Whitman Miller et al.   Nature Climate Change

Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding

(2013) Yinqiu Ji et al.   ECOLOGY LETTERS

A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents

(2013) Matthieu Leray et al.   Frontiers in Zoology

Redesign of PCR primers for mitochondrial cytochromecoxidase subunit I for marine invertebrates and application in all-taxa biotic surveys

(2013) J. Geller et al.   Molecular Ecology Resources

Validation of eDNA Surveillance Sensitivity for Detection of Asian Carps in Controlled and Field Experiments

(2013) Andrew R. Mahon et al.   PLoS One

Are Hotspots Always Hotspots? The Relationship between Diversity, Resource and Ecosystem Functions in the Arctic

(2013) Heike Link et al.   PLoS One

A new species of Streptospinigera Kudenov, 1983 (Polychaeta, Syllidae, Anoplosyllinae) from the Arctic and north-western Atlantic with a key to all species of the genus

(2013) Frédéric Olivier et al.   POLAR BIOLOGY

Relative risk assessment for ballast-mediated invasions at Canadian Arctic ports

(2012) Farrah T. Chan et al.   BIOLOGICAL INVASIONS

Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA

(2012) DAVID M. LODGE et al.   MOLECULAR ECOLOGY

Environmental DNA

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

An emergent science on the brink of irrelevance: a review of the past 8 years of DNA barcoding

(2012) H. R. TAYLOR et al.   Molecular Ecology Resources

Investigating the Potential Use of Environmental DNA (eDNA) for Genetic Monitoring of Marine Mammals

(2012) Andrew D. Foote et al.   PLoS One

Detection of a Diverse Marine Fish Fauna Using Environmental DNA from Seawater Samples

(2012) Philip Francis Thomsen et al.   PLoS One

Sequencing our way towards understanding global eukaryotic biodiversity

(2012) Holly M. Bik et al.   TRENDS IN ECOLOGY & EVOLUTION

Biodiversity and ecosystem services science for a sustainable planet: the DIVERSITAS vision for 2012–20

(2012) Anne Larigauderie et al.   Current Opinion in Environmental Sustainability

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

Universal COI primers for DNA barcoding amphibians

(2011) JING CHE et al.   Molecular Ecology Resources

From Sea to Sea: Canada's Three Oceans of Biodiversity

(2010) Philippe Archambault et al.   PLoS One

Towards a pan-Arctic inventory of the species diversity of the macro- and megabenthic fauna of the Arctic shelf seas

(2010) Dieter Piepenburg et al.   Marine Biodiversity

Projecting global marine biodiversity impacts under climate change scenarios

(2009) William W.L. Cheung et al.   FISH AND FISHERIES