An Overview of the Elusive Passenger in the Gastrointestinal Tract of Cattle: The Shiga Toxin Producing Escherichia coli

A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae

(2020) Jinshui Zheng et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Rumen Virus Populations: Technological Advances Enhancing Current Understanding

(2020) Rosalind A. Gilbert et al.   Frontiers in Microbiology

A meta-analysis of the bovine gastrointestinal tract microbiota

(2019) Devin B Holman et al.   FEMS MICROBIOLOGY ECOLOGY

Cellular and Mucosal Immune Responses Following Vaccination with Inactivated Mutant of Escherichia coli O157:H7

(2019) Robert G. Schaut et al.   Scientific Reports

Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm

(2019) Serajus Salaheen et al.   FOOD CONTROL

Effect of different seasons (spring vs summer) on the microbiota diversity in the feces of dairy cows

(2019) Han Li et al.   INTERNATIONAL JOURNAL OF BIOMETEOROLOGY

Characterization of Non-O157 STEC Infecting Bacteriophages Isolated from Cattle Faeces in North-West South Africa

(2019) Emmanuel W. Bumunang et al.   Microorganisms

Characterization of Lytic Bacteriophages Infecting Multidrug-Resistant Shiga Toxigenic Atypical Escherichia coli O177 Strains Isolated From Cattle Feces

(2019) Peter Kotsoana Montso et al.   Frontiers in Public Health

Associations between Escherichia coli O157 shedding and the faecal microbiota of dairy cows

(2018) C. Stenkamp-Strahm et al.   JOURNAL OF APPLIED MICROBIOLOGY

High-grain diets supplemented with phytogenic compounds or autolyzed yeast modulate ruminal bacterial community and fermentation in dry cows

(2018) V. Neubauer et al.   JOURNAL OF DAIRY SCIENCE

Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection

(2018) Rekha Seshadri et al.   NATURE BIOTECHNOLOGY

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

(2018) Robert D. Stewart et al.   Nature Communications

Lactobacilli Are Prominent Members of the Microbiota Involved in the Ruminal Digestion of Barley and Corn

(2018) Hee E. Yang et al.   Frontiers in Microbiology

Review: Enhancing gastrointestinal health in dairy cows

(2018) J. C. Plaizier et al.   Animal

Application of bacteriophages in simultaneously controlling Escherichia coli O157:H7 and extended-spectrum beta-lactamase producing Escherichia coli

(2018) Hoang Minh Son et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Aspartate metabolism is involved in the maintenance of enterohaemorrhagic Escherichia coli O157:H7 in bovine intestinal content

(2018) Yolande Bertin et al.   ENVIRONMENTAL MICROBIOLOGY

Preweaned heifer management on US dairy operations: Part IV. Factors associated with the presence of Escherichia coli O157 in preweaned dairy heifers

(2018) C. Stenkamp-Strahm et al.   JOURNAL OF DAIRY SCIENCE

The composition of the perinatal intestinal microbiota in cattle

(2018) Mohammad Jaber Alipour et al.   Scientific Reports

Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future

(2018) Sharon A. Huws et al.   Frontiers in Microbiology

Transcriptomic analysis reveals specific metabolic pathways of enterohemorrhagic Escherichia coli O157:H7 in bovine digestive contents

(2018) Audrey Segura et al.   BMC GENOMICS

Use of Bacteriophages to Control Escherichia coli O157:H7 in Domestic Ruminants, Meat Products, and Fruits and Vegetables

(2017) Lili Wang et al.   Foodborne Pathogens and Disease

Farm Fairs and Petting Zoos: A Review of Animal Contact as a Source of Zoonotic Enteric Disease

(2017) Cheyenne C. Conrad et al.   Foodborne Pathogens and Disease

The effects of monensin in diets fed to finishing beef steers and heifers on growth performance and fecal shedding of Escherichia coli O157:H71

(2017) K. E. Hales et al.   JOURNAL OF ANIMAL SCIENCE

Understanding the gut microbiome of dairy calves: Opportunities to improve early-life gut health 1

(2017) Nilusha Malmuthuge et al.   JOURNAL OF DAIRY SCIENCE

Isolation, genotyping and antimicrobial resistance of Shiga toxin-producing Escherichia coli

(2017) Bianca A. Amézquita-López et al.   JOURNAL OF MICROBIOLOGY IMMUNOLOGY AND INFECTION

Effect of high-fat diet and growth stage on the diversity and composition of intestinal microbiota in healthy bovine livestock

(2017) Shengyin Jiao et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

A randomized controlled trial to evaluate the effects of dietary fibre from distillers grains on enterohemorrhagic Escherichia coli detection from the rectoanal mucosa and hides of feedlot steers

(2017) L. G. Schneider et al.   Zoonoses and Public Health

Nutritional Models of Experimentally-Induced Subacute Ruminal Acidosis (SARA) Differ in Their Impact on Rumen and Hindgut Bacterial Communities in Dairy Cows

(2017) Jan C. Plaizier et al.   Frontiers in Microbiology

Metatranscriptomics Reveals the Active Bacterial and Eukaryotic Fibrolytic Communities in the Rumen of Dairy Cow Fed a Mixed Diet

(2017) Sophie Comtet-Marre et al.   Frontiers in Microbiology

Changes in bacterial community composition of Escherichia coli O157:H7 super-shedder cattle occur in the lower intestine

(2017) Rahat Zaheer et al.   PLoS One

Lactobacillus reuteri suppresses E. coli O157:H7 in bovine ruminal fluid: Toward a pre-slaughter strategy to improve food safety?

(2017) Yolande Bertin et al.   PLoS One

Diarrheagenic Escherichia coli

(2016) Tânia A.T. Gomes et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Association of Escherichia coli O157:H7 with Filth Flies (Muscidae and Calliphoridae) Captured in Leafy Greens Fields and Experimental Transmission of E. coli O157:H7 to Spinach Leaves by House Flies (Diptera: Muscidae)

(2016) J. L. TALLEY et al.   JOURNAL OF FOOD PROTECTION

Effect of Rumen Protozoa on Escherichia coli O157:H7 in the Rumen and Feces of Specifically Faunated Sheep

(2016) K. STANFORD et al.   JOURNAL OF FOOD PROTECTION

Non-O157 Shiga Toxin–Producing Escherichia coli in Foods

(2016) EMILY C. MATHUSA et al.   JOURNAL OF FOOD PROTECTION

Protozoan Predation of Escherichia coli O157:H7 Is Unaffected by the Carriage of Shiga Toxin-Encoding Bacteriophages

(2016) Carrie E. Schmidt et al.   PLoS One

Effects of Isoflavone-Enriched Feed on the Rumen Microbiota in Dairy Cows

(2016) Jitka Kasparovska et al.   PLoS One

Influence of Season and Feedlot Location on Prevalence and Virulence Factors of Seven Serogroups of Escherichia coli in Feces of Western-Canadian Slaughter Cattle

(2016) Kim Stanford et al.   PLoS One

Effect of Probiotics/Prebiotics on Cattle Health and Productivity

(2015) Yutaka Uyeno et al.   MICROBES AND ENVIRONMENTS

Prevalence and concentration of Escherichia coli O157 in different seasons and cattle types processed in North America: A systematic review and meta-analysis of published research

(2015) Pius S. Ekong et al.   PREVENTIVE VETERINARY MEDICINE

Association between animal age and the prevalence of Shiga toxin-producing Escherichia coli in a cohort of beef cattle

(2015) Raies A. Mir et al.   VETERINARY MICROBIOLOGY

Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range

(2015) Gemma Henderson et al.   Scientific Reports

Characterising the bacterial microbiota across the gastrointestinal tracts of dairy cattle: membership and potential function

(2015) Shengyong Mao et al.   Scientific Reports

Escherichia coli O157:H7 bacteriophage Φ241 isolated from an industrial cucumber fermentation at high acidity and salinity

(2015) Zhongjing Lu et al.   Frontiers in Microbiology

Illumina MiSeq Phylogenetic Amplicon Sequencing Shows a Large Reduction of an Uncharacterised Succinivibrionaceae and an Increase of the Methanobrevibacter gottschalkii Clade in Feed Restricted Cattle

(2015) Matthew Sean McCabe et al.   PLoS One

Capacity of the bovine intestinal mucus and its components to support growth of Escherichia coli O157:H7

(2014) C. C. Aperce et al.   Animal

Clearance of Escherichia coli O157:H7 Infection in Calves by Rectal Administration of Bovine Lactoferrin

(2014) E. Kieckens et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prevalence of Carriage of Shiga Toxin-Producing Escherichia coli Serotypes O157:H7, O26:H11, O103:H2, O111:H8, and O145:H28 among Slaughtered Adult Cattle in France

(2014) Delphine Bibbal et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fibrolytic Rumen Bacteria: Their Ecology and Functions

(2014) Satoshi Koike et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

The Escherichia coli O157:H7 bovine rumen fluid proteome reflects adaptive bacterial responses

(2014) Indira T Kudva et al.   BMC MICROBIOLOGY

MEAT SCIENCE AND MUSCLE BIOLOGY SYMPOSIUM:Escherichia coli O157:H7, diet, and fecal microbiome in beef cattle12

(2014) J. E. Wells et al.   JOURNAL OF ANIMAL SCIENCE

Characterization of the Core Rumen Microbiome in Cattle during Transition from Forage to Concentrate as Well as during and after an Acidotic Challenge

(2014) Renee M. Petri et al.   PLoS One

Regional Variation in the Prevalence of E. coli O157 in Cattle: A Meta-Analysis and Meta-Regression

(2014) Md. Zohorul Islam et al.   PLoS One

Escherichia coli O157:H7 Super-Shedder and Non-Shedder Feedlot Steers Harbour Distinct Fecal Bacterial Communities

(2014) Yong Xu et al.   PLoS One

The Gluconeogenesis Pathway Is Involved in Maintenance of Enterohaemorrhagic Escherichia coli O157:H7 in Bovine Intestinal Content

(2014) Yolande Bertin et al.   PLoS One

Physiopathological effects of Escherichia coli O157:H7 inoculation in weaned calves fed with colostrum containing antibodies to EspB and Intimin

(2014) B.C. Rabinovitz et al.   VACCINE

The Use of Direct-Fed Microbials to Reduce Shedding ofEscherichia coliO157 in Beef Cattle: A Systematic Review and Meta-analysis

(2014) L. V. Wisener et al.   Zoonoses and Public Health

Characterization of the rumen lipidome and microbiome of steers fed a diet supplemented with flax and echium oil

(2014) Sharon Ann Huws et al.   Microbial Biotechnology

Changes in the Rumen Epimural Bacterial Diversity of Beef Cattle as Affected by Diet and Induced Ruminal Acidosis

(2013) R. M. Petri et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SdiA Aids Enterohemorrhagic Escherichia coli Carriage by Cattle Fed a Forage or Grain Diet

(2013) Haiqing Sheng et al.   INFECTION AND IMMUNITY

Effects of feeding dried distillers grains with supplemental starch on fecal shedding of Escherichia coli O157:H7 in experimentally inoculated steers1

(2013) Z. D. Paddock et al.   JOURNAL OF ANIMAL SCIENCE

Correlation analysis of Shiga toxin-producingEscherichia colishedding and faecal bacterial composition in beef cattle

(2013) L. Zhao et al.   JOURNAL OF APPLIED MICROBIOLOGY

Fecal Shedding in Cattle Inoculated with Escherichia coli O157:H7 and Fed Corn or Wheat Distillers' Dried Grain with Solubles

(2013) J. HALLEWELL et al.   JOURNAL OF FOOD PROTECTION

Isolation, characterization and complete genome sequence of PhaxI: a phage of Escherichia coli O157 : H7

(2013) S. S. Shahrbabak et al.   MICROBIOLOGY-SGM

Bile Salts Affect Expression of Escherichia coli O157:H7 Genes for Virulence and Iron Acquisition, and Promote Growth under Iron Limiting Conditions

(2013) Steve Hamner et al.   PLoS One

Characterizing the microbiota across the gastrointestinal tract of a Brazilian Nelore steer

(2013) Marcelo Nagem Valério de Oliveira et al.   VETERINARY MICROBIOLOGY

Phage biocontrol of enteropathogenic and shiga toxin-producing Escherichia coli in meat products

(2013) David Tomat et al.   Frontiers in Cellular and Infection Microbiology

Proteins other than the locus of enterocyte effacement-encoded proteins contribute to Escherichia coli O157:H7 adherence to bovine rectoanal junction stratified squamous epithelial cells

(2012) Indira T Kudva et al.   BMC MICROBIOLOGY

Carbohydrate utilization by enterohaemorrhagicEscherichia coliO157:H7 in bovine intestinal content

(2012) Yolande Bertin et al.   ENVIRONMENTAL MICROBIOLOGY

Survival of O157:H7 and Non-O157 Serogroups of Escherichia coli in Bovine Rumen Fluid and Bile Salts

(2012) Angela L. Free et al.   Foodborne Pathogens and Disease

Correlating Levels of Type III Secretion and Secreted Proteins with Fecal Shedding of Escherichia coli O157:H7 in Cattle

(2012) V. K. Sharma et al.   INFECTION AND IMMUNITY

Multicenter Evaluation of a Sequence-Based Protocol for Subtyping Shiga Toxins and Standardizing Stx Nomenclature

(2012) F. Scheutz et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Vaccination of pregnant cows with EspA, EspB, γ-intimin, and Shiga toxin 2 proteins from Escherichia coli O157:H7 induces high levels of specific colostral antibodies that are transferred to newborn calves

(2012) B.C. Rabinovitz et al.   JOURNAL OF DAIRY SCIENCE

Endemic bacteriophages: a cautionary tale for evaluation of bacteriophage therapy and other interventions for infection control in animals

(2012) Andrew M Kropinski et al.   Virology Journal

Shiga toxin in enterohemorrhagic E.coli: regulation and novel anti-virulence strategies

(2012) Alline R. Pacheco et al.   Frontiers in Cellular and Infection Microbiology

Review: The use of direct fed microbials to mitigate pathogens and enhance production in cattle

(2011) T. A. McAllister et al.   CANADIAN JOURNAL OF ANIMAL SCIENCE

Dietary monensin level, supplemental urea, and ractopamine on fecal shedding of Escherichia coli O157:H7 in feedlot cattle1

(2011) Z. D. Paddock et al.   JOURNAL OF ANIMAL SCIENCE

Microbial ecosystem and methanogenesis in ruminants

(2010) D. P. Morgavi et al.   Animal

Distribution of Shiga-Toxigenic Escherichia coli O157 in the Gastrointestinal Tract of Naturally O157-Shedding Cattle at Necropsy

(2010) J. E. Keen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rumen Microbial Population Dynamics during Adaptation to a High-Grain Diet

(2010) S. C. Fernando et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enterohaemorrhagic Escherichia coli gains a competitive advantage by using ethanolamine as a nitrogen source in the bovine intestinal content

(2010) Yolande Bertin et al.   ENVIRONMENTAL MICROBIOLOGY

Escherichia coli O157:H7: Animal Reservoir and Sources of Human Infection

(2010) Witold A. Ferens et al.   Foodborne Pathogens and Disease

Survival of Escherichia coli in the environment: fundamental and public health aspects

(2010) Jan Dirk van Elsas et al.   ISME Journal

Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing1

(2010) T. R. Callaway et al.   JOURNAL OF ANIMAL SCIENCE

Pathogenicity-Associated Islands in Extraintestinal Pathogenic Escherichia coli Are Fitness Elements Involved in Intestinal Colonization

(2010) M. Diard et al.   JOURNAL OF BACTERIOLOGY

Population structure of rumen Escherichia coli associated with subacute ruminal acidosis (SARA) in dairy cattle

(2010) E. Khafipour et al.   JOURNAL OF DAIRY SCIENCE

Transfer of Enteric Pathogens to Successive Habitats as Part of Microbial Cycles

(2010) Alexander M. Semenov et al.   MICROBIAL ECOLOGY

Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes

(2010) Dylan Dodd et al.   MOLECULAR MICROBIOLOGY

Methanogens: Methane Producers of the Rumen and Mitigation Strategies

(2010) Sarah E. Hook et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Maternally and Naturally Acquired Antibodies to Shiga Toxins in a Cohort of Calves Shedding Shiga-Toxigenic Escherichia coli

(2009) J. Frohlich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fates of Acid-Resistant and Non-Acid-Resistant Shiga Toxin-Producing Escherichia coli Strains in Ruminant Digestive Contents in the Absence and Presence of Probiotics

(2009) F. Chaucheyras-Durand et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rumen Microbiome Composition Determined Using Two Nutritional Models of Subacute Ruminal Acidosis

(2009) E. Khafipour et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence

(2009) Chad R Laing et al.   BMC GENOMICS

Invited review: The use of distillers products in dairy cattle diets

(2009) D.J. Schingoethe et al.   JOURNAL OF DAIRY SCIENCE

Molecular Analysis as an Aid To Assess the Public Health Risk of Non-O157 Shiga Toxin-Producing Escherichia coli Strains

(2008) B. K. Coombes et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

An investigation of the expression and adhesin function of H7 flagella in the interaction ofEscherichia coliO157 : H7 with bovine intestinal epithelium

(2008) Arvind Mahajan et al.   CELLULAR MICROBIOLOGY

Super-shedding and the link between human infection and livestock carriage of Escherichia coli O157

(2008) Margo Chase-Topping et al.   NATURE REVIEWS MICROBIOLOGY

Long-term survival of Shiga toxin-producing Escherichia coli in cattle effluents and environment: An updated review

(2008) B. Fremaux et al.   VETERINARY MICROBIOLOGY

E. coli O157:H7 catabolism of intestinal mucin-derived carbohydrates and colonization

(2008) Timothy A. Snider et al.   VETERINARY MICROBIOLOGY