Metabolic Engineering Strategies in Diatoms Reveal Unique Phenotypes and Genetic Configurations With Implications for Algal Genetics and Synthetic Biology
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Metabolic Engineering Strategies in Diatoms Reveal Unique Phenotypes and Genetic Configurations With Implications for Algal Genetics and Synthetic Biology
Authors
Keywords
-
Journal
Frontiers in Bioengineering and Biotechnology
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2020-06-05
DOI
10.3389/fbioe.2020.00513
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Extrachromosomal Genetic Engineering of the Marine Diatom Phaeodactylum tricornutum Enables the Heterologous Production of Monoterpenoids
- (2020) Michele Fabris et al. ACS Synthetic Biology
- The complex architecture and epigenomic impact of plant T-DNA insertions
- (2019) Florian Jupe et al. PLoS Genetics
- Locating and Characterizing a Transgene Integration Site by Nanopore Sequencing
- (2019) Peter K. Nicholls et al. G3-Genes Genomes Genetics
- Hitchhiking on chromosomes: A persistence strategy shared by diverse selfish DNA elements
- (2019) Soumitra Sau et al. PLASMID
- Construction of a series of episomal plasmids and their application in the development of an efficient CRISPR/Cas9 system in Pichia pastoris
- (2019) Yang Gu et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Skeletonema marinoi as a new genetic model for marine chain-forming diatoms
- (2019) Oskar N. Johansson et al. Scientific Reports
- Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom
- (2019) Sarah R. Smith et al. Nature Communications
- Nanopore sequencing and assembly of a human genome with ultra-long reads
- (2018) Miten Jain et al. NATURE BIOTECHNOLOGY
- Engineering the unicellular alga Phaeodactylum tricornutum for high-value plant triterpenoid production
- (2018) Sarah D'Adamo et al. PLANT BIOTECHNOLOGY JOURNAL
- Missing enzymes in the biosynthesis of the anticancer drug vinblastine in Madagascar periwinkle
- (2018) Lorenzo Caputi et al. SCIENCE
- An Expanded Plasmid-Based Genetic Toolbox Enables Cas9 Genome Editing and Stable Maintenance of Synthetic Pathways in Phaeodactylum tricornutum
- (2018) Samuel S. Slattery et al. ACS Synthetic Biology
- Optimizing CRISPR/Cas9 for the Diatom Phaeodactylum tricornutum
- (2018) Daniel Stukenberg et al. Frontiers in Plant Science
- A Stable, Autonomously Replicating Plasmid Vector Containing Pichia pastoris Centromeric DNA
- (2018) Yasuyuki Nakamura et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- One-step generation of multiple gene knock-outs in the diatom Phaeodactylum tricornutum by DNA-free genome editing
- (2018) Manuel Serif et al. Nature Communications
- Transgene-free genome editing in marine algae by bacterial conjugation – comparison with biolistic CRISPR/Cas9 transformation
- (2018) A. K. Sharma et al. Scientific Reports
- Orchestration of transcriptome, proteome and metabolome in the diatom Phaeodactylum tricornutum during nitrogen limitation
- (2018) Ilse M. Remmers et al. Algal Research-Biomass Biofuels and Bioproducts
- Silencing of transgene expression in mammalian cells by DNA methylation and histone modifications in gene therapy perspective
- (2018) Suleiman Yusuf Alhaji et al. Biotechnology & Genetic Engineering Reviews
- Terpenoid Metabolic Engineering in Photosynthetic Microorganisms
- (2018) Konstantinos Vavitsas et al. Genes
- Manipulation of GES and ERG20 for geraniol overproduction in Saccharomyces cerevisiae
- (2017) Guo-Zhen Jiang et al. METABOLIC ENGINEERING
- Genetic and metabolic engineering in diatoms
- (2017) Weichao Huang et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Targeting of Photoreceptor Genes inChlamydomonas reinhardtiivia Zinc-Finger Nucleases and CRISPR/Cas9
- (2017) Andre Greiner et al. PLANT CELL
- High-Quality de Novo Genome Assembly of the Dekkera bruxellensis Yeast Using Nanopore MinION Sequencing
- (2017) Téo Fournier et al. G3-Genes Genomes Genetics
- A fast and reliable strategy to generate TALEN-mediated gene knockouts in the diatom Phaeodactylum tricornutum
- (2017) M. Serif et al. Algal Research-Biomass Biofuels and Bioproducts
- Alkaline phosphatase promoter as an efficient driving element for exogenic recombinant in the marine diatom Phaeodactylum tricornutum
- (2017) Hung-Yun Lin et al. Algal Research-Biomass Biofuels and Bioproducts
- Towards developing algal synthetic biology
- (2016) M. A. Scaife et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Identifying and retargeting transcriptional hot spots in the human genome
- (2016) Joseph K. Cheng et al. Biotechnology Journal
- High levels of histone H3 acetylation at the CMV promoter are predictive of stable expression in Chinese hamster ovary cells
- (2016) Benjamin Moritz et al. BIOTECHNOLOGY PROGRESS
- Pan-transcriptomic analysis identifies coordinated and orthologous functional modules in the diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum
- (2016) Justin Ashworth et al. Marine Genomics
- CRISPR-Cas9 for the genome engineering of cyanobacteria and succinate production
- (2016) Hung Li et al. METABOLIC ENGINEERING
- Gene Insertion Into Genomic Safe Harbors for Human Gene Therapy
- (2016) Eirini P Papapetrou et al. MOLECULAR THERAPY
- Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana
- (2016) Amanda Hopes et al. Plant Methods
- A CRISPR/Cas9 system adapted for gene editing in marine algae
- (2016) Marianne Nymark et al. Scientific Reports
- Proteome response of Phaeodactylum tricornutum , during lipid accumulation induced by nitrogen depletion
- (2016) Joseph Longworth et al. Algal Research-Biomass Biofuels and Bioproducts
- Addressing various compartments of the diatom model organism Phaeodactylum tricornutum via sub-cellular marker proteins
- (2016) Xiaojuan Liu et al. Algal Research-Biomass Biofuels and Bioproducts
- Identifying and retargeting transcriptional hot spots in the human genome
- (2016) Joseph K. Cheng et al. Biotechnology Journal
- Transgene Expression in Microalgae—From Tools to Applications
- (2016) Lior Doron et al. Frontiers in Plant Science
- CRISPR/Cas9-induced knockout and knock-in mutations in Chlamydomonas reinhardtii
- (2016) Sung-Eun Shin et al. Scientific Reports
- Gene silencing in microalgae: Mechanisms and biological roles
- (2015) Eun-Jeong Kim et al. BIORESOURCE TECHNOLOGY
- Strategies for cloning and manipulating natural and synthetic chromosomes
- (2015) Bogumil J. Karas et al. CHROMOSOME RESEARCH
- Improving aSynechocystis-based photoautotrophic chassis through systematic genome mapping and validation of neutral sites
- (2015) Filipe Pinto et al. DNA RESEARCH
- Biotechnological exploitation of microalgae
- (2015) Doris Gangl et al. JOURNAL OF EXPERIMENTAL BOTANY
- Designer diatom episomes delivered by bacterial conjugation
- (2015) Bogumil J. Karas et al. Nature Communications
- Site-specific integration in CHO cells mediated by CRISPR/Cas9 and homology-directed DNA repair pathway
- (2015) Jae Seong Lee et al. Scientific Reports
- Epigenetic silencing in transgenic plants
- (2015) Sarma Rajeevkumar et al. Frontiers in Plant Science
- Towards the Industrial Production of Omega-3 Long Chain Polyunsaturated Fatty Acids from a Genetically Modified Diatom Phaeodactylum tricornutum
- (2015) Mary L. Hamilton et al. PLoS One
- Glycerol and neutral lipid production in the oleaginous marine diatom Phaeodactylum tricornutum promoted by overexpression of glycerol-3-phosphate dehydrogenase
- (2014) Yao Yao et al. Biotechnology for Biofuels
- Tracking the sterol biosynthesis pathway of the diatomPhaeodactylum tricornutum
- (2014) Michele Fabris et al. NEW PHYTOLOGIST
- Inactivation of Phaeodactylum tricornutum urease gene using transcription activator-like effector nuclease-based targeted mutagenesis
- (2014) Philip D. Weyman et al. PLANT BIOTECHNOLOGY JOURNAL
- Metabolic variability in bioprocessing: implications of microbial phenotypic heterogeneity
- (2014) Frank Delvigne et al. TRENDS IN BIOTECHNOLOGY
- Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology
- (2014) Fayza Daboussi et al. Nature Communications
- Identification of “safe harbor†loci in indica rice genome by harnessing the property of zinc-finger nucleases to induce DNA damage and repair
- (2014) Christian Cantos et al. Frontiers in Plant Science
- Metabolic engineering of Phaeodactylum tricornutum for the enhanced accumulation of omega-3 long chain polyunsaturated fatty acids
- (2013) Mary L. Hamilton et al. METABOLIC ENGINEERING
- Heterologous Expression of the Mevalonic Acid Pathway in Cyanobacteria Enhances Endogenous Carbon Partitioning to Isoprene
- (2013) Fiona K. Bentley et al. Molecular Plant
- High-level semi-synthetic production of the potent antimalarial artemisinin
- (2013) C. J. Paddon et al. NATURE
- CathaCyc, a Metabolic Pathway Database Built from Catharanthus roseus RNA-Seq Data
- (2013) Alex Van Moerkercke et al. PLANT AND CELL PHYSIOLOGY
- Trait stacking via targeted genome editing
- (2013) William M. Ainley et al. PLANT BIOTECHNOLOGY JOURNAL
- Isoprene Production Via the Mevalonic Acid Pathway in Escherichia coli (Bacteria)
- (2012) Andreas Zurbriggen et al. BioEnergy Research
- An engineered diatom acting like a plasma cell secreting human IgG antibodies with high efficiency
- (2012) Franziska Hempel et al. Microbial Cell Factories
- The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway
- (2012) Michele Fabris et al. PLANT JOURNAL
- Silencing of the Violaxanthin De-Epoxidase Gene in the Diatom Phaeodactylum tricornutum Reduces Diatoxanthin Synthesis and Non-Photochemical Quenching
- (2012) Johann Lavaud et al. PLoS One
- RNA-Mediated Silencing in Algae: Biological Roles and Tools for Analysis of Gene Function
- (2011) Heriberto Cerutti et al. EUKARYOTIC CELL
- Microalgae as bioreactors for bioplastic production
- (2011) Franziska Hempel et al. Microbial Cell Factories
- Evolution and metabolic significance of the urea cycle in photosynthetic diatoms
- (2011) Andrew E. Allen et al. NATURE
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Algae as Protein Factories: Expression of a Human Antibody and the Respective Antigen in the Diatom Phaeodactylum tricornutum
- (2011) Franziska Hempel et al. PLoS One
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- Nuclear Geometry and Rapid Mitosis Ensure Asymmetric Episome Segregation in Yeast
- (2010) Lutz R. Gehlen et al. CURRENT BIOLOGY
- Geraniol — A review of a commercially important fragrance material
- (2010) W. Chen et al. SOUTH AFRICAN JOURNAL OF BOTANY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- The life of diatoms in the world's oceans
- (2009) E. Virginia Armbrust NATURE
- Stable transgenes bear fruit
- (2008) Ajay Kohli et al. NATURE BIOTECHNOLOGY
- Homogeneity and persistence of transgene expression by omitting antibiotic selection in cell line isolation
- (2008) W. L. Kaufman et al. NUCLEIC ACIDS RESEARCH
- A Model for Carbohydrate Metabolism in the Diatom Phaeodactylum tricornutum Deduced from Comparative Whole Genome Analysis
- (2008) Peter G. Kroth et al. PLoS One
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now