Genetic stock structure of New Zealand fish and the use of genomics in fisheries management: an overview and outlook

Genetic diversity and heritability of economically important traits in captive Australasian snapper (Chrysophrys auratus)

(2019) David T. Ashton et al.   AQUACULTURE

Unlocking the potential of ancient fish DNA in the genomic era

(2019) Tom Oosting et al.   Evolutionary Applications

Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus

(2019) Floriaan Devloo‐Delva et al.   Ecology and Evolution

SNP s reveal a genetic cline across the northeast Atlantic and enable powerful population assignment in the European lobster

(2019) Tom L. Jenkins et al.   Evolutionary Applications

Balanced harvest: concept, policies, evidence, and management implications

(2019) Shijie Zhou et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Contrasting genomic shifts underlie parallel phenotypic evolution in response to fishing

(2019) Nina O. Therkildsen et al.   SCIENCE

Testing the Adaptive Potential of Yellowtail Kingfish to Ocean Warming and Acidification

(2019) Philip L. Munday et al.   Frontiers in Ecology and Evolution

Defining spatial structure for fishery stock assessment

(2019) Steven X. Cadrin   FISHERIES RESEARCH

Genetic management of mixed-stock fisheries “real-time”: The case of the largest remaining cod fishery operating in the Atlantic in 2007–2017

(2018) Geir Dahle et al.   FISHERIES RESEARCH

Asymmetric oceanographic processes mediate connectivity and population genetic structure, as revealed by RADseq, in a highly dispersive marine invertebrate (Parastichopus californicus )

(2018) Amanda Xuereb et al.   MOLECULAR ECOLOGY

Seascape genomics reveals adaptive divergence in a connected and commercially important mollusc, the greenlip abalone (Haliotis laevigata ), along a longitudinal environmental gradient

(2018) Jonathan Sandoval-Castillo et al.   MOLECULAR ECOLOGY

Double-digest RAD sequencing outperforms microsatellite loci at assigning paternity and estimating relatedness: A proof of concept in a highly promiscuous bird

(2018) Derrick J. Thrasher et al.   Molecular Ecology Resources

Projecting shifts in thermal habitat for 686 species on the North American continental shelf

(2018) James W. Morley et al.   PLoS One

Population genetic signatures of a climate change driven marine range extension

(2018) Jorge E. Ramos et al.   Scientific Reports

From conservation genetics to conservation genomics: a genome-wide assessment of blue whales ( Balaenoptera musculus ) in Australian feeding aggregations

(2018) Catherine R. M. Attard et al.   Royal Society Open Science

A climate-associated multispecies cryptic cline in the northwest Atlantic

(2018) Ryan R. E. Stanley et al.   Science Advances

Robust estimates of a high N e / N ratio in a top marine predator, southern bluefin tuna

(2018) Robin S. Waples et al.   Science Advances

Experimental evidence for rapid genomic adaptation to a new niche in an adaptive radiation

(2018) David A. Marques et al.   Nature Ecology & Evolution

Genetic connectivity and phylogeography of the night shark (Carcharhinus signatus ) in the western Atlantic Ocean: Implications for conservation management

(2018) Rodrigo R. Domingues et al.   AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS

Genetic relatedness reveals total population size of white sharks in eastern Australia and New Zealand

(2018) R. M. Hillary et al.   Scientific Reports

The population genomics of yellowfin tuna (Thunnus albacares) at global geographic scale challenges current stock delineation

(2018) Carlo Pecoraro et al.   Scientific Reports

Estimating effective population size of large marine populations, is it feasible?

(2018) Florianne Marandel et al.   FISH AND FISHERIES

Applications of next-generation sequencing in fisheries research: A review

(2017) Girish Kumar et al.   FISHERIES RESEARCH

Minimum sample sizes for population genomics: an empirical study from an Amazonian plant species

(2017) Alison G. Nazareno et al.   Molecular Ecology Resources

Advances of genotyping-by-sequencing in fisheries and aquaculture

(2017) Yan-He Li et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Integrated approach to determining stock structure: implications for fisheries management of sardine, Sardinops sagax, in Australian waters

(2017) Christopher Izzo et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Harnessing the Power of Genomics to Secure the Future of Seafood

(2017) Louis Bernatchez et al.   TRENDS IN ECOLOGY & EVOLUTION

RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity

(2017) David L. J. Vendrami et al.   Royal Society Open Science

Population genetics of Southern Hemisphere tope shark (Galeorhinus galeus): Intercontinental divergence and constrained gene flow at different geographical scales

(2017) Aletta E. Bester-van der Merwe et al.   PLoS One

How fisheries management can benefit from genomics?

(2016) Fausto Valenzuela-Quiñonez   Briefings in Functional Genomics

Balanced harvesting can emerge from fishing decisions by individual fishers in a small-scale fishery

(2016) Michael J Plank et al.   FISH AND FISHERIES

The phylogeography and population genetics of Polyprion oxygeneios based on mitochondrial DNA sequences and microsatellite DNA markers

(2016) Henry S. Lane et al.   FISHERIES RESEARCH

Genetic markers in marine fisheries: Types, tasks and trends

(2016) José Cuéllar-Pinzón et al.   FISHERIES RESEARCH

Otolith chemistry in stock delineation: A brief overview, current challenges and future prospects

(2016) Susanne E. Tanner et al.   FISHERIES RESEARCH

Potential for adaptation to climate change in a coral reef fish

(2016) Philip L. Munday et al.   GLOBAL CHANGE BIOLOGY

Lessons learned from practical approaches to reconcile mismatches between biological population structure and stock units of marine fish

(2016) Lisa A. Kerr et al.   ICES JOURNAL OF MARINE SCIENCE

Genetic structure of West Greenland populations of lumpfishCyclopterus lumpus

(2016) E. Garcia-Mayoral et al.   JOURNAL OF FISH BIOLOGY

Comparing RADseq and microsatellites to infer complex phylogeographic patterns, an empirical perspective in the Crucian carp,Carassius carassius,L.

(2016) Daniel L. Jeffries et al.   MOLECULAR ECOLOGY

Harnessing the power of RADseq for ecological and evolutionary genomics

(2016) Kimberly R. Andrews et al.   NATURE REVIEWS GENETICS

Close-Kin Mark-Recapture

(2016) Mark V. Bravington et al.   STATISTICAL SCIENCE

Absolute abundance of southern bluefin tuna estimated by close-kin mark-recapture

(2016) Mark V. Bravington et al.   Nature Communications

Fisheries-Induced Evolution

(2015) Mikko Heino et al.   Annual Review of Ecology Evolution and Systematics

Demographic history and the South Pacific dispersal barrier for school shark (Galeorhinus galeus) inferred by mitochondrial DNA and microsatellite DNA mark

(2015) Sebastián Hernández et al.   FISHERIES RESEARCH

Global mitochondrial DNA phylogeography and population structure of the silky shark, Carcharhinus falciformis

(2015) Christopher R. Clarke et al.   MARINE BIOLOGY

Transatlantic secondary contact in Atlantic Salmon, comparing microsatellites, a single nucleotide polymorphism array and restriction-site associated DNA sequencing for the resolution of complex spatial structure

(2015) Ian R. Bradbury et al.   MOLECULAR ECOLOGY

Using Genetic Markers as Individual Tags: a Case Study of a Mark–Recapture Estimate of Adult Muskellunge Population Size

(2015) Loren M. Miller et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Ocean's eleven: a critical evaluation of the role of population, evolutionary and molecular genetics in the management of wild fisheries

(2015) Jennifer R Ovenden et al.   FISH AND FISHERIES

Integrating microsatellite DNA markers and otolith geochemistry to assess population structure of European hake (Merluccius merluccius)

(2014) Susanne E. Tanner et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Ocean warming, a rapid distributional shift, and the hybridization of a coastal fish species

(2014) Warren M. Potts et al.   GLOBAL CHANGE BIOLOGY

Stock identification of Atlantic cod (Gadus morhua) in US waters: an interdisciplinary approach

(2014) D. R. Zemeckis et al.   ICES JOURNAL OF MARINE SCIENCE

Contemporary fisheries stock assessment: many issues still remain

(2014) M. N. Maunder et al.   ICES JOURNAL OF MARINE SCIENCE

Snapper (Chrysophrys auratus): a review of life history and key vulnerabilities in New Zealand

(2014) DM Parsons et al.   NEW ZEALAND JOURNAL OF MARINE AND FRESHWATER RESEARCH

Adaptive potential of a Pacific salmon challenged by climate change

(2014) Nicolas J. Muñoz et al.   Nature Climate Change

Global genetic population structure in the commercially exploited deep-sea teleost orange roughy (Hoplostethus atlanticus) based on microsatellite DNA analyses

(2013) Andrea I. Varela et al.   FISHERIES RESEARCH

Experimental harvesting of fish populations drives genetically based shifts in body size and maturation

(2013) Serinde J van Wijk et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod

(2013) Nina O. Therkildsen et al.   MOLECULAR ECOLOGY

Meta-analysis reveals lower genetic diversity in overfished populations

(2013) Malin L. Pinsky et al.   MOLECULAR ECOLOGY

Low genetic differentiation between two geographically separated populations of demersal gadiform fishes in the Southern Hemisphere

(2012) Hirohiko Takeshima et al.   GENES & GENETIC SYSTEMS

Global and New Caledonian patterns of population genetic variation in the deep-sea splendid alfonsino, Beryx splendens, inferred from mtDNA

(2012) Lauriana Lévy-Hartmann et al.   GENETICA

Molecular markers: progress and prospects for understanding reproductive ecology in elasmobranchs

(2012) D. S. Portnoy et al.   JOURNAL OF FISH BIOLOGY

Low levels of global genetic differentiation and population expansion in the deep-sea teleost Hoplostethus atlanticus revealed by mitochondrial DNA sequences

(2012) Andrea I. Varela et al.   MARINE BIOLOGY

Reconsidering the Consequences of Selective Fisheries

(2012) S. M. Garcia et al.   SCIENCE

Harnessing genomics for delineating conservation units

(2012) W. Chris Funk et al.   TRENDS IN ECOLOGY & EVOLUTION

Genetic population structure of Yellowtail Kingfish (Seriola lalandi) in temperate Australasian waters inferred from microsatellite markers and mitochondrial DNA

(2011) Penny A. Miller et al.   AQUACULTURE

Lack of genetic differentiation observed in Pacific bluefin tuna (Thunnus orientalis) from Taiwanese and New Zealand waters using mitochondrial and nuclear DNA markers

(2011) Mei-Chen Tseng et al.   MARINE AND FRESHWATER RESEARCH

Hypotheses of Spatial Stock Structure in Orange Roughy Hoplostethus atlanticus Inferred from Diet, Feeding, Condition, and Reproductive Activity

(2011) Matthew R. Dunn et al.   PLoS One

Integrating fish and parasite data as a holistic solution for identifying the elusive stock structure of Pacific sardines (Sardinops sagax)

(2011) Rebecca E. Baldwin et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Building evolutionary resilience for conserving biodiversity under climate change

(2010) Carla M. Sgrò et al.   Evolutionary Applications

Population structure of beaked redfish, Sebastes mentella: evidence of divergence associated with different habitats

(2010) S. X. Cadrin et al.   ICES JOURNAL OF MARINE SCIENCE

Fine-scale spatial and temporal genetic structure of Atlantic cod off the Atlantic coast of the USA

(2010) AI Kovach et al.   MARINE ECOLOGY PROGRESS SERIES

Global population structure of the spiny dogfishSqualus acanthias, a temperate shark with an antitropical distribution

(2010) A. VERÍSSIMO et al.   MOLECULAR ECOLOGY

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Genetic population structure of marine fish: mismatch between biological and fisheries management units

(2009) Henning Reiss et al.   FISH AND FISHERIES

Optimising recreational harvests of blue cod: The effects of catch-and-release mortality and size selectivity

(2009) I.M. Henderson   FISHERIES RESEARCH

Global population structure of the tope (Galeorhinus galeus) inferred by mitochondrial control region sequence data

(2009) C. L. CHABOT et al.   MOLECULAR ECOLOGY

Integrating genetic data into management of marine resources: how can we do it better?

(2008) Robin S Waples et al.   FISH AND FISHERIES

New perspectives on fish movement: kernel and GAM smoothers applied to a century of tagging data on coastal Atlantic cod

(2008) SH Espeland et al.   MARINE ECOLOGY PROGRESS SERIES

Considerations on sampling strategies for an holistic approach to stock identification: The example of the HOMSIR project

(2007) P. Abaunza et al.   FISHERIES RESEARCH