Asymmetric oceanographic processes mediate connectivity and population genetic structure, as revealed by RADseq, in a highly dispersive marine invertebrate (Parastichopus californicus )

Harnessing the Power of Genomics to Secure the Future of Seafood

(2017) Louis Bernatchez et al.   TRENDS IN ECOLOGY & EVOLUTION

Biophysical connectivity explains population genetic structure in a highly dispersive marine species

(2016) Nathan K. Truelove et al.   CORAL REEFS

Navigating the currents of seascape genomics: how spatial analyses can augment population genomic studies

(2016) Cynthia Riginos et al.   Current Zoology

Testing dispersal limits in the sea: range-wide phylogeography of the pronghorn spiny lobsterPanulirus penicillatus

(2016) Matthew Iacchei et al.   JOURNAL OF BIOGEOGRAPHY

A decade of seascape genetics: contributions to basic and applied marine connectivity

(2016) KA Selkoe et al.   MARINE ECOLOGY PROGRESS SERIES

Conservation genomics of natural and managed populations: building a conceptual and practical framework

(2016) Laura Marilyn Benestan et al.   MOLECULAR ECOLOGY

Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus )

(2016) Laura Benestan et al.   MOLECULAR ECOLOGY

Navigating the currents of seascape genomics: how spatial analyses can augment population genomic studies

(2016) Cynthia Riginos et al.   Current Zoology

A decade of seascape genetics: contributions to basic and applied marine connectivity

(2016) KA Selkoe et al.   MARINE ECOLOGY PROGRESS SERIES

Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era

(2015) Pierre-Alexandre Gagnaire et al.   Evolutionary Applications

Genetically distinct populations of northern shrimp,Pandalus borealis, in the North Atlantic: adaptation to different temperatures as an isolation factor

(2015) Per Erik Jorde et al.   MOLECULAR ECOLOGY

RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus)

(2015) Laura Benestan et al.   MOLECULAR ECOLOGY

Patterns, causes, and consequences of marine larval dispersal

(2015) Cassidy C. D’Aloia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isolation by resistance across a complex coral reef seascape

(2015) Luke Thomas et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ocean's eleven: a critical evaluation of the role of population, evolutionary and molecular genetics in the management of wild fisheries

(2015) Jennifer R Ovenden et al.   FISH AND FISHERIES

A Model Simulation of Future Oceanic Conditions along the British Columbia Continental Shelf. Part II: Results and Analyses

(2014) M.G.G. Foreman et al.   ATMOSPHERE-OCEAN

A Model Simulation of Future Oceanic Conditions along the British Columbia Continental Shelf. Part I: Forcing Fields and Initial Conditions

(2014) J. Morrison et al.   ATMOSPHERE-OCEAN

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha)

(2014) Wesley A. Larson et al.   Evolutionary Applications

Ocean circulation model predicts high genetic structure observed in a long-lived pelagic developer

(2014) J. M. Sunday et al.   MOLECULAR ECOLOGY

Seascape continuity plays an important role in determining patterns of spatial genetic structure in a coral reef fish

(2014) C. C. D'Aloia et al.   MOLECULAR ECOLOGY

Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests

(2014) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Climate change impacts on connectivity in the ocean: Implications for conservation

(2014) Leah R. Gerber et al.   Ecosphere

Evolving coral reef conservation with genetic information

(2013) Maria Beger et al.   BULLETIN OF MARINE SCIENCE

A new eigenfunction spatial analysis describing population genetic structure

(2013) José Alexandre Felizola Diniz-Filho et al.   GENETICA

Testing the consistency of connectivity patterns for a widely dispersing marine species

(2013) L Thomas et al.   HEREDITY

Combined analyses of kinship andFSTsuggest potential drivers of chaotic genetic patchiness in high gene-flow populations

(2013) Matthew Iacchei et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Larval Connectivity and the International Management of Fisheries

(2013) Andrew S. Kough et al.   PLoS One

Changing Seascapes, Stochastic Connectivity, and Marine Metapopulation Dynamics

(2012) James R. Watson et al.   AMERICAN NATURALIST

Community ecology in the age of multivariate multiscale spatial analysis

(2012) S. Dray et al.   ECOLOGICAL MONOGRAPHS

Reproductive Output and Duration of the Pelagic Larval Stage Determine Seascape-Wide Connectivity of Marine Populations

(2012) Eric A. Treml et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Modeling seasonal to interannual ocean variability of coastal British Columbia

(2012) Diane Masson et al.   JOURNAL OF GEOPHYSICAL RESEARCH

The trouble with isolation by distance

(2012) PATRICK G. MEIRMANS   MOLECULAR ECOLOGY

Connectivity of Caribbean coral populations: complementary insights from empirical and modelled gene flow

(2012) NICOLA L. FOSTER et al.   MOLECULAR ECOLOGY

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

Harnessing genomics for delineating conservation units

(2012) W. Chris Funk et al.   TRENDS IN ECOLOGY & EVOLUTION

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Enhancements to the ADMIXTURE algorithm for individual ancestry estimation

(2011) David H Alexander et al.   BMC BIOINFORMATICS

Dispersal connectivity and reserve selection for marine conservation

(2011) Stuart Kininmonth et al.   ECOLOGICAL MODELLING

Using production models with new and developing fisheries: A case study using the sea cucumber Parastichopus californicus in British Columbia, Canada

(2011) Wayne Hajas et al.   FISHERIES RESEARCH

Matching genetics with oceanography: directional gene flow in a Mediterranean fish species

(2011) C. SCHUNTER et al.   MOLECULAR ECOLOGY

Identifying critical regions in small-world marine metapopulations

(2011) J. R. Watson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast and SNP-tolerant detection of complex variants and splicing in short reads

(2010) T. D. Wu et al.   BIOINFORMATICS

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Divergence genetics analysis reveals historical population genetic processes leading to contrasting phylogeographic patterns in co-distributed species

(2010) TAMARA M. McGOVERN et al.   MOLECULAR ECOLOGY

Landscape modelling of gene flow: improved power using conditional genetic distance derived from the topology of population networks

(2010) RODNEY J. DYER et al.   MOLECULAR ECOLOGY

Taking the chaos out of genetic patchiness: seascape genetics reveals ecological and oceanographic drivers of genetic patterns in three temperate reef species

(2010) KIMBERLY A. SELKOE et al.   MOLECULAR ECOLOGY

What can genetics tell us about population connectivity?

(2010) WINSOR H. LOWE et al.   MOLECULAR ECOLOGY

Assessing the power of informative subsets of loci for population assignment: standard methods are upwardly biased

(2010) E. C. ANDERSON   Molecular Ecology Resources

Modelling the effect of directional spatial ecological processes at different scales

(2010) F. Guillaume Blanchet et al.   OECOLOGIA

Ocean currents help explain population genetic structure

(2010) C. White et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

To Fight Illegal Fishing, Forensic DNA Gets Local

(2010) E. Stokstad   SCIENCE

Connectivity, biodiversity conservation and the design of marine reserve networks for coral reefs

(2009) G. R. Almany et al.   CORAL REEFS

Graph models of habitat mosaics

(2009) Dean L. Urban et al.   ECOLOGY LETTERS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Estimating connectivity in marine populations: an empirical evaluation of assignment tests and parentage analysis under different gene flow scenarios

(2009) P. SAENZ-AGUDELO et al.   MOLECULAR ECOLOGY

Larval Dispersal and Marine Population Connectivity

(2008) Robert K. Cowen et al.   Annual Review of Marine Science

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Integrating genetic data into management of marine resources: how can we do it better?

(2008) Robin S Waples et al.   FISH AND FISHERIES

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

SpBase: the sea urchin genome database and web site

(2008) R. A. Cameron et al.   NUCLEIC ACIDS RESEARCH