RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity
Authors
Keywords
-
Journal
Royal Society Open Science
Volume 4, Issue 2, Pages 160548
Publisher
The Royal Society
Online
2017-02-08
DOI
10.1098/rsos.160548
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genomics of local adaptation with gene flow
- (2016) Anna Tigano et al. MOLECULAR ECOLOGY
- Population genomic footprints of fine-scale differentiation between habitats in Mediterranean blue tits
- (2016) M. Szulkin et al. MOLECULAR ECOLOGY
- Finding the right coverage: the impact of coverage and sequence quality on single nucleotide polymorphism genotyping error rates
- (2016) Emily D. Fountain et al. Molecular Ecology Resources
- Detection and Removal of PCR Duplicates in Population Genomic ddRAD Studies by Addition of a Degenerate Base Region (DBR) in Sequencing Adapters
- (2016) Hannah Schweyen et al. BIOLOGICAL BULLETIN
- Genetic structure of a commercially exploited bivalve, the great scallop Pecten maximus, along the European coasts
- (2015) Romain Morvezen et al. CONSERVATION GENETICS
- RAD Sequencing Highlights Polygenic Discrimination of Habitat Ecotypes in the Panmictic American Eel
- (2015) Scott A. Pavey et al. CURRENT BIOLOGY
- RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus)
- (2015) Laura Benestan et al. MOLECULAR ECOLOGY
- Phenotypic plasticity accounts for most of the variation in leaf manganese concentrations in Phytolacca americana growing in manganese-contaminated environments
- (2015) Chen Chen et al. PLANT AND SOIL
- Environmental and genetic interactions revealFLOWERING LOCUSCas a modulator of the natural variation for the plasticity of flowering in Arabidopsis
- (2015) Belén Méndez-Vigo et al. PLANT CELL AND ENVIRONMENT
- Momocs: Outline Analysis UsingR
- (2015) Vincent Bonhomme et al. Journal of Statistical Software
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Genome-wide SNPs lead to strong signals of geographic structure and relatedness patterns in the major arbovirus vector, Aedes aegypti
- (2014) Gordana Rašić et al. BMC GENOMICS
- Demystifying the RAD fad
- (2014) Jonathan B. Puritz et al. MOLECULAR ECOLOGY
- Restriction site-associated DNA sequencing, genotyping error estimation andde novoassembly optimization for population genetic inference
- (2014) A. Mastretta-Yanes et al. Molecular Ecology Resources
- High-throughput sequencing reveals inbreeding depression in a natural population
- (2014) J. I. Hoffman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Signs of Adaptation to Local pH Conditions across an Environmental Mosaic in the California Current Ecosystem
- (2013) M. H. Pespeni et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- Going where traditional markers have not gone before: utility of and promise for RAD sequencing in marine invertebrate phylogeography and population genomics
- (2013) A. M. Reitzel et al. MOLECULAR ECOLOGY
- Variation in Size and Growth of the Great Scallop Pecten maximus along a Latitudinal Gradient
- (2012) Laurent Chauvaud et al. PLoS One
- Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
- (2012) Brant K. Peterson et al. PLoS One
- Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers
- (2012) Eva-Maria Willing et al. PLoS One
- adegenet 1.3-1: new tools for the analysis of genome-wide SNP data
- (2011) Thibaut Jombart et al. BIOINFORMATICS
- Genome-wide genetic marker discovery and genotyping using next-generation sequencing
- (2011) John W. Davey et al. NATURE REVIEWS GENETICS
- Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences
- (2011) Julian M. Catchen et al. G3-Genes Genomes Genetics
- Phenotypic plasticity and genetic isolation-by-distance in the freshwater mussel Unio pictorum (Mollusca: Unionoida)
- (2010) A. Zieritz et al. EVOLUTIONARY ECOLOGY
- Multi-locus inference of population structure: a comparison between single nucleotide polymorphisms and microsatellites
- (2010) R J Haasl et al. HEREDITY
- Strong Population Genetic Structure in a Broadcast-Spawning Antarctic Marine Invertebrate
- (2010) Joseph I. Hoffman et al. JOURNAL OF HEREDITY
- Effects of brooding and broadcasting reproductive modes on the population genetic structure of two Antarctic gastropod molluscs
- (2010) J. I. Hoffman et al. MARINE BIOLOGY
- Gene Flow and Isolation among Populations of Marine Animals
- (2009) Michael E. Hellberg Annual Review of Ecology Evolution and Systematics
- Comparative Performance of Single Nucleotide Polymorphism and Microsatellite Markers for Population Genetic Analysis
- (2009) Brad S. Coates et al. JOURNAL OF HEREDITY
- No evidence for genetic differentiation between Antarctic limpet Nacella concinna morphotypes
- (2009) J. I. Hoffman et al. MARINE BIOLOGY
- Inferring weak population structure with the assistance of sample group information
- (2009) MELISSA J. HUBISZ et al. Molecular Ecology Resources
- The influence of oceanographic fronts and early-life-history traits on connectivity among littoral fish species
- (2009) J. A. Galarza et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- adegenet: a R package for the multivariate analysis of genetic markers
- (2008) Thibaut Jombart BIOINFORMATICS
- Modifications in Microstructure of Cultured and Wild Scallop Shells (Pecten maximus)
- (2008) Ellen Sofie Grefsrud et al. JOURNAL OF SHELLFISH RESEARCH
- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
- (2008) Nathan A. Baird et al. PLoS One
- Driven by the West Wind Drift? A synthesis of southern temperate marine biogeography, with new directions for dispersalism
- (2007) Jonathan M. Waters JOURNAL OF BIOGEOGRAPHY
- genepop’007: a complete re-implementation of the genepop software for Windows and Linux
- (2007) FRANÇOIS ROUSSET Molecular Ecology Resources
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More