Isolating live cell clones from barcoded populations using CRISPRa-inducible reporters
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Title
Isolating live cell clones from barcoded populations using CRISPRa-inducible reporters
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Keywords
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Journal
NATURE BIOTECHNOLOGY
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-07-28
DOI
10.1038/s41587-020-0614-0
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Note: Only part of the references are listed.- Cell competition during reprogramming gives rise to dominant clones
- (2019) Nika Shakiba et al. SCIENCE
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- (2019) Federico Marini et al. BMC BIOINFORMATICS
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- (2018) Florian Rambow et al. CELL
- Control of Lineage-Specific Gene Expression by Functionalized gRNA Barcodes
- (2018) Aziz M. Al’Khafaji et al. ACS Synthetic Biology
- Maftools: efficient and comprehensive analysis of somatic variants in cancer
- (2018) Anand Mayakonda et al. GENOME RESEARCH
- Single-cell mapping of lineage and identity in direct reprogramming
- (2018) Brent A. Biddy et al. NATURE
- Cellular barcoding: lineage tracing, screening and beyond
- (2018) Justus M. Kebschull et al. NATURE METHODS
- Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance
- (2017) Sydney M. Shaffer et al. NATURE
- Inhibiting Drivers of Non-mutational Drug Tolerance Is a Salvage Strategy for Targeted Melanoma Therapy
- (2016) Michael P. Smith et al. CANCER CELL
- Tumor cells can follow distinct evolutionary paths to become resistant to epidermal growth factor receptor inhibition
- (2016) Aaron N Hata et al. NATURE MEDICINE
- Comparison of Cas9 activators in multiple species
- (2016) Alejandro Chavez et al. NATURE METHODS
- deepTools2: a next generation web server for deep-sequencing data analysis
- (2016) Fidel Ramírez et al. NUCLEIC ACIDS RESEARCH
- Heatmapper: web-enabled heat mapping for all
- (2016) Sasha Babicki et al. NUCLEIC ACIDS RESEARCH
- The YUMM lines: a series of congenic mouse melanoma cell lines with defined genetic alterations
- (2016) Katrina Meeth et al. Pigment Cell & Melanoma Research
- Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
- (2016) I. Tirosh et al. SCIENCE
- Drug resistance in cancer: molecular evolution and compensatory proliferation
- (2016) Ran Friedman Oncotarget
- Cell Fate Decision as High-Dimensional Critical State Transition
- (2016) Mitra Mojtahedi et al. PLOS BIOLOGY
- Biological and Therapeutic Impact of Intratumor Heterogeneity in Cancer Evolution
- (2015) Nicholas McGranahan et al. CANCER CELL
- Studying clonal dynamics in response to cancer therapy using high-complexity barcoding
- (2015) Hyo-eun C Bhang et al. NATURE MEDICINE
- Toward better understanding of artifacts in variant calling from high-coverage samples
- (2014) Heng Li BIOINFORMATICS
- Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
- (2014) Luke A. Gilbert et al. CELL
- A stress-induced early innate response causes multidrug tolerance in melanoma
- (2014) D Ravindran Menon et al. ONCOGENE
- Mechanism-based cancer therapy: resistance to therapy, therapy for resistance
- (2014) P Ramos et al. ONCOGENE
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- Causal analysis approaches in Ingenuity Pathway Analysis
- (2013) Andreas Krämer et al. BIOINFORMATICS
- Acquired Resistance and Clonal Evolution in Melanoma during BRAF Inhibitor Therapy
- (2013) H. Shi et al. Cancer Discovery
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- Clonal evolution in cancer
- (2012) Mel Greaves et al. NATURE
- APCluster: an R package for affinity propagation clustering
- (2011) U. Bodenhofer et al. BIOINFORMATICS
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
- (2011) H. Li BIOINFORMATICS
- Strategies for Homeostatic Stem Cell Self-Renewal in Adult Tissues
- (2011) Benjamin D. Simons et al. CELL
- Improved Tet-responsive promoters with minimized background expression
- (2010) Rainer Loew et al. BMC BIOTECHNOLOGY
- A Chromatin-Mediated Reversible Drug-Tolerant State in Cancer Cell Subpopulations
- (2010) Sreenath V. Sharma et al. CELL
- Toolkit for evaluating genes required for proliferation and survival using tetracycline-regulated RNAi
- (2010) Johannes Zuber et al. NATURE BIOTECHNOLOGY
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- Elite and stochastic models for induced pluripotent stem cell generation
- (2009) Shinya Yamanaka NATURE
- Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
- (2009) Steffen Durinck et al. Nature Protocols
- Mechanisms of Disease: cancer stem cells—targeting the evil twin
- (2008) Andreas Trumpp et al. Nature clinical practice. Oncology
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