Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans

The Still Underestimated Problem of Fungal Diseases Worldwide

(2019) Fausto Almeida et al.   Frontiers in Microbiology

Mitogen-Activated Protein Kinase Cross-Talk Interaction Modulates the Production of Melanins in Aspergillus fumigatus

(2019) Adriana Oliveira Manfiolli et al.   mBio

Echinocandins for the treatment of invasive aspergillosis: from laboratory to bedside

(2019) Marion Aruanno et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Nutritional Heterogeneity Among Aspergillus fumigatus Strains Has Consequences for Virulence in a Strain- and Host-Dependent Manner

(2019) Laure Nicolas Annick Ries et al.   Frontiers in Microbiology

Aspergillus fumigatus and Aspergillosis in 2019

(2019) Jean-Paul Latgé et al.   CLINICAL MICROBIOLOGY REVIEWS

Neutrophil phagocyte oxidase activity controls invasive fungal growth and inflammation in zebrafish

(2019) Taylor J. Schoen et al.   JOURNAL OF CELL SCIENCE

Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulans complex obtained from clinical and environmental sources

(2019) Mahin Tavakoli et al.   MYCOSES

Recent trends in the epidemiology, diagnosis, treatment, and mechanisms of resistance in clinical Aspergillus species: A general review with a special focus on the Middle Eastern and North African region

(2019) Ayate Zakaria et al.   Journal of Infection and Public Health

MetaboAnalystR: an R package for flexible and reproducible analysis of metabolomics data

(2018) Jasmine Chong et al.   BIOINFORMATICS

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The spectrum of pulmonary aspergillosis

(2018) Amjad Kanj et al.   RESPIRATORY MEDICINE

Regulation of Aspergillus nidulans CreA-Mediated Catabolite Repression by the F-Box Proteins Fbx23 and Fbx47

(2018) Leandro José de Assis et al.   mBio

The Aspergillus nidulans Pyruvate Dehydrogenase Kinases Are Essential To Integrate Carbon Source Metabolism

(2018) Laure Nicolas Annick Ries et al.   G3-Genes Genomes Genetics

Macrophages inhibit Aspergillus fumigatus germination and neutrophil-mediated fungal killing

(2018) Emily E. Rosowski et al.   PLoS Pathogens

Chromosome assembly of large and complex genomes using multiple references

(2018) Mikhail Kolmogorov et al.   GENOME RESEARCH

The Pfam protein families database in 2019

(2018) Sara El-Gebali et al.   NUCLEIC ACIDS RESEARCH

Hybrid assembly of the large and highly repetitive genome ofAegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm

(2017) Aleksey V. Zimin et al.   GENOME RESEARCH

Canu: scalable and accurate long-read assembly via adaptivek-mer weighting and repeat separation

(2017) Sergey Koren et al.   GENOME RESEARCH

Filamentous fungal carbon catabolite repression supports metabolic plasticity and stress responses essential for disease progression

(2017) Sarah R. Beattie et al.   PLoS Pathogens

Central Role of IL-23 and IL-17 Producing Eosinophils as Immunomodulatory Effector Cells in Acute Pulmonary Aspergillosis and Allergic Asthma

(2017) Evelyn Santos Guerra et al.   PLoS Pathogens

Chronic granulomatous disease

(2016) Dirk Roos   BRITISH MEDICAL BULLETIN

Diverse Regulation of the CreA Carbon Catabolite Repressor in Aspergillus nidulans

(2016) Laure N. A. Ries et al.   GENETICS

The Lung Microbiome, Immunity, and the Pathogenesis of Chronic Lung Disease

(2016) David N. O’Dwyer et al.   JOURNAL OF IMMUNOLOGY

Decreased Cell Wall Galactosaminogalactan inAspergillus nidulansMediates Dysregulated Inflammation in the Chronic Granulomatous Disease Host

(2016) Stefanie S.V. Henriet et al.   JOURNAL OF INTERFERON AND CYTOKINE RESEARCH

Aspergillus section Nidulantes (formerly Emericella): Polyphasic taxonomy, chemistry and biology

(2016) A.J. Chen et al.   STUDIES IN MYCOLOGY

Heterogeneity among Isolates Reveals that Fitness in Low Oxygen Correlates with Aspergillus fumigatus Virulence

(2016) Caitlin H. Kowalski et al.   mBio

Aspergillus fumigatus Photobiology Illuminates the Marked Heterogeneity between Isolates

(2016) Kevin K. Fuller et al.   mBio

Aspergillus fumigatus MADS-Box Transcription Factor rlmA Is Required for Regulation of the Cell Wall Integrity and Virulence

(2016) Marina Campos Rocha et al.   G3-Genes Genomes Genetics

Diverse Regulation of the CreA Carbon Catabolite Repressor in Aspergillus nidulans

(2016) Laure N. A. Ries et al.   GENETICS

Candida albicans and Pseudomonas aeruginosa Interaction, with Focus on the Role of Eicosanoids

(2016) Ruan Fourie et al.   Frontiers in Physiology

Characterization of Aspergillus fumigatus Isolates from Air and Surfaces of the International Space Station

(2016) Benjamin P. Knox et al.   mSphere

Ecology of aspergillosis: insights into the pathogenic potency ofAspergillus fumigatusand some otherAspergillusspecies

(2016) Caroline Paulussen et al.   Microbial Biotechnology

DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies

(2016) Chengxi Ye et al.   Scientific Reports

The Aspergillus fumigatus sitA Phosphatase Homologue Is Important for Adhesion, Cell Wall Integrity, Biofilm Formation, and Virulence

(2015) Vinícius Leite Pedro Bom et al.   EUKARYOTIC CELL

Human Neutrophils Use Different Mechanisms To KillAspergillus fumigatusConidia and Hyphae: Evidence from Phagocyte Defects

(2015) Roel P. Gazendam et al.   JOURNAL OF IMMUNOLOGY

The Aspergillus fumigatus cell wall integrity signaling pathway: drug target, compensatory pathways, and virulence

(2015) Vito Valiante et al.   Frontiers in Microbiology

Distinct Innate Immune Phagocyte Responses to Aspergillus fumigatus Conidia and Hyphae in Zebrafish Larvae

(2014) Benjamin P. Knox et al.   EUKARYOTIC CELL

The Aspergillus nidulans acuL gene encodes a mitochondrial carrier required for the utilization of carbon sources that are metabolized via the TCA cycle

(2014) Michel Flipphi et al.   FUNGAL GENETICS AND BIOLOGY

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

(2014) Rei Kajitani et al.   GENOME RESEARCH

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

The clinical spectrum of pulmonary aspergillosis

(2014) C. Kosmidis et al.   THORAX

Invasive fungal infection and impaired neutrophil killing in human CARD9 deficiency

(2013) A. Drewniak et al.   BLOOD

The Composition of the Culture Medium Influences the β-1,3-Glucan Metabolism of Aspergillus fumigatus and the Antifungal Activity of Inhibitors of β-1,3-Glucan Synthesis

(2012) Cécile Clavaud et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Exploiting sparseness in de novo genome assembly

(2012) Chengxi Ye et al.   BMC BIOINFORMATICS

Growth of Candida albicans Cells on the Physiologically Relevant Carbon Source Lactate Affects Their Recognition and Phagocytosis by Immune Cells

(2012) Iuliana V. Ene et al.   INFECTION AND IMMUNITY

Aspergillus nidulans and Chronic Granulomatous Disease: A Unique Host–Pathogen Interaction

(2012) Stefanie S. V. Henriet et al.   JOURNAL OF INFECTIOUS DISEASES

Tackling Human Fungal Infections

(2012) G. D. Brown et al.   SCIENCE

Hidden Killers: Human Fungal Infections

(2012) G. D. Brown et al.   Science Translational Medicine

Sample amount alternatives for data adjustment in comparative cyanobacterial metabolomics

(2011) Jan Huege et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

In vivo Hypoxia and a Fungal Alcohol Dehydrogenase Influence the Pathogenesis of Invasive Pulmonary Aspergillosis

(2011) Nora Grahl et al.   PLoS Pathogens

Transcriptional Regulation of Chitin Synthases by Calcineurin Controls Paradoxical Growth of Aspergillus fumigatus in Response to Caspofungin

(2010) J. R. Fortwendel et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Human Leukocytes KillAspergillus nidulansby Reactive Oxygen Species-Independent Mechanisms

(2010) Stefanie S. V. Henriet et al.   INFECTION AND IMMUNITY

What makes Aspergillus fumigatus a successful pathogen? Genes and molecules involved in invasive aspergillosis

(2010) Ana Abad et al.   REVISTA IBEROAMERICANA DE MICOLOGIA

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Invasive aspergillosis in chronic granulomatous disease

(2009) Brahm H. Segal et al.   MEDICAL MYCOLOGY

DNAPlotter: circular and linear interactive genome visualization

(2008) T. Carver et al.   BIOINFORMATICS

Ability to grow on lipids accounts for the fully virulent phenotype in neutropenic mice of Aspergillus fumigatus null mutants in the key glyoxylate cycle enzymes

(2007) Israel Olivas et al.   FUNGAL GENETICS AND BIOLOGY