Filamentous fungal carbon catabolite repression supports metabolic plasticity and stress responses essential for disease progression

The Rewiring of Ubiquitination Targets in a Pathogenic Yeast Promotes Metabolic Flexibility, Host Colonization and Virulence

(2016) Delma S. Childers et al.   PLoS Pathogens

The Zinc Finger Protein Mig1 Regulates Mitochondrial Function and Azole Drug Susceptibility in the Pathogenic Fungus Cryptococcus neoformans

(2016) Mélissa Caza et al.   mSphere

In vivo veritas: Aspergillus fumigatusproliferation and pathogenesis – conditionally speaking

(2015) Robert A Cramer   Virulence

Mutant characterization andin vivoconditional repression identify aromatic amino acid biosynthesis to be essential forAspergillus fumigatusvirulence

(2015) Anna Sasse et al.   Virulence

Direct involvement of the CreA transcription factor in penicillin biosynthesis and expression of the pcbAB gene in Penicillium chrysogenum

(2014) Cristina Cepeda-García et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species

(2014) S. Priebe et al.   BIOINFORMATICS

Myeloid Derived Hypoxia Inducible Factor 1-alpha Is Required for Protection against Pulmonary Aspergillus fumigatus Infection

(2014) Kelly M. Shepardson et al.   PLoS Pathogens

ChIP-seq and In Vivo Transcriptome Analyses of the Aspergillus fumigatus SREBP SrbA Reveals a New Regulator of the Fungal Hypoxia Response and Virulence

(2014) Dawoon Chung et al.   PLoS Pathogens

Aspergillus fumigatus—What Makes the Species a Ubiquitous Human Fungal Pathogen?

(2013) Kyung J. Kwon-Chung et al.   PLoS Pathogens

Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter

(2012) Bridget M Barker et al.   BMC GENOMICS

Dsc Orthologs Are Required for Hypoxia Adaptation, Triazole Drug Responses, and Fungal Virulence in Aspergillus fumigatus

(2012) Sven D. Willger et al.   EUKARYOTIC CELL

Hypoxia enhances innate immune activation to Aspergillus fumigatus through cell wall modulation

(2012) Kelly M. Shepardson et al.   MICROBES AND INFECTION

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

The Evolutionary Rewiring of Ubiquitination Targets Has Reprogrammed the Regulation of Carbon Assimilation in the Pathogenic Yeast Candida albicans

(2012) D. Sandai et al.   mBio

Deciphering metabolic traits of the fungal pathogen Aspergillus fumigatus: redundancy vs. essentiality

(2012) Jorge Amich et al.   Frontiers in Microbiology

Analysis of theAspergillus fumigatusProteome Reveals Metabolic Changes and the Activation of the Pseurotin A Biosynthesis Gene Cluster in Response to Hypoxia

(2011) Martin Vödisch et al.   JOURNAL OF PROTEOME RESEARCH

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Identification of the CRE-1 Cellulolytic Regulon in Neurospora crassa

(2011) Jianping Sun et al.   PLoS One

SREBP Coordinates Iron and Ergosterol Homeostasis to Mediate Triazole Drug and Hypoxia Responses in the Human Fungal Pathogen Aspergillus fumigatus

(2011) Michael Blatzer et al.   PLoS Genetics

In vivo Hypoxia and a Fungal Alcohol Dehydrogenase Influence the Pathogenesis of Invasive Pulmonary Aspergillosis

(2011) Nora Grahl et al.   PLoS Pathogens

The Small GTPase RacA Mediates Intracellular Reactive Oxygen Species Production, Polarized Growth, and Virulence in the Human Fungal Pathogen Aspergillus fumigatus

(2010) Haiyan Li et al.   EUKARYOTIC CELL

What makes Aspergillus fumigatus a successful pathogen? Genes and molecules involved in invasive aspergillosis

(2010) Ana Abad et al.   REVISTA IBEROAMERICANA DE MICOLOGIA

Genetic Modification of Carbon Catabolite Repression in Trichoderma reesei for Improved Protein Production

(2009) T. Nakari-Setala et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Blood glucose concentration and outcome of critical illness: The impact of diabetes*

(2009) Moritoki Egi et al.   CRITICAL CARE MEDICINE

Fungal metabolism in host niches

(2009) Matthias Brock   CURRENT OPINION IN MICROBIOLOGY

Aspergillus fumigatusmetabolism: Clues to mechanisms ofin vivofungal growth and virulence

(2009) Sven D. Willger et al.   MEDICAL MYCOLOGY

Overexpression of isocitrate lyase—glyoxylate bypass influence on metabolism in Aspergillus niger

(2009) S. Meijer et al.   METABOLIC ENGINEERING

Major roles of isocitrate lyase and malate synthase in bacterial and fungal pathogenesis

(2009) M. F. Dunn et al.   MICROBIOLOGY-SGM

Glucose Promotes Stress Resistance in the Fungal Pathogen Candida albicans

(2009) Alexandra Rodaki et al.   MOLECULAR BIOLOGY OF THE CELL

Mutation ofCRE1inFusarium oxysporumreverts the pathogenicity defects of theFRP1deletion mutant

(2009) Wilfried Jonkers et al.   MOLECULAR MICROBIOLOGY

Carbon catabolite repression in bacteria: many ways to make the most out of nutrients

(2008) Boris Görke et al.   NATURE REVIEWS MICROBIOLOGY

A direct link between carbohydrate utilization and virulence in the major human pathogen group A Streptococcus

(2008) S. A. Shelburne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Sterol-Regulatory Element Binding Protein Is Required for Cell Polarity, Hypoxia Adaptation, Azole Drug Resistance, and Virulence in Aspergillus fumigatus

(2008) Sven D. Willger et al.   PLoS Pathogens