Nutritional Heterogeneity Among Aspergillus fumigatus Strains Has Consequences for Virulence in a Strain- and Host-Dependent Manner

The Aspergillus nidulans Pyruvate Dehydrogenase Kinases Are Essential To Integrate Carbon Source Metabolism

(2018) Laure Nicolas Annick Ries et al.   G3-Genes Genomes Genetics

Analyses of the three 1-Cys Peroxiredoxins from Aspergillus fumigatus reveal that cytosolic Prx1 is central to H2O2 metabolism and virulence

(2018) Marina Campos Rocha et al.   Scientific Reports

Macrophages inhibit Aspergillus fumigatus germination and neutrophil-mediated fungal killing

(2018) Emily E. Rosowski et al.   PLoS Pathogens

Overview of carbon and nitrogen catabolite metabolism in the virulence of human pathogenic fungi

(2017) Laure Nicolas Annick Ries et al.   MOLECULAR MICROBIOLOGY

The Aspergillus fumigatus CrzA Transcription Factor Activates Chitin Synthase Gene Expression during the Caspofungin Paradoxical Effect

(2017) Laure Nicolas Annick Ries et al.   mBio

Heterogeneity Confounds Establishment of “a” Model Microbial Strain

(2017) Nancy P. Keller   mBio

Galectin-3 impacts Cryptococcus neoformans infection through direct antifungal effects

(2017) Fausto Almeida et al.   Nature Communications

Aspergillus fumigatus Copper Export Machinery and Reactive Oxygen Intermediate Defense Counter Host Copper-Mediated Oxidative Antimicrobial Offense

(2017) Philipp Wiemann et al.   Cell Reports

Extensive Copy Number Variation in Fermentation-Related Genes Among Saccharomyces cerevisiae Wine Strains

(2017) Jacob Steenwyk et al.   G3-Genes Genomes Genetics

Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species

(2017) Abigail L. Lind et al.   PLOS BIOLOGY

Filamentous fungal carbon catabolite repression supports metabolic plasticity and stress responses essential for disease progression

(2017) Sarah R. Beattie et al.   PLoS Pathogens

Phenotypic and Proteomic Analysis of the Aspergillus fumigatus ΔPrtT, ΔXprG and ΔXprG/ΔPrtT Protease-Deficient Mutants

(2017) Einav Shemesh et al.   Frontiers in Microbiology

Ergot alkaloids contribute to virulence in an insect model of invasive aspergillosis

(2017) Daniel G. Panaccione et al.   Scientific Reports

Three extracellular dipeptidyl peptidases found in Aspergillus oryzae show varying substrate specificities

(2016) Hiroshi Maeda et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Diverse Regulation of the CreA Carbon Catabolite Repressor in Aspergillus nidulans

(2016) Laure N. A. Ries et al.   GENETICS

Galactosaminogalactan of Aspergillus fumigatus, a bioactive fungal polymer

(2016) Benoit Briard et al.   MYCOLOGIA

Heterogeneity among Isolates Reveals that Fitness in Low Oxygen Correlates with Aspergillus fumigatus Virulence

(2016) Caitlin H. Kowalski et al.   mBio

Aspergillus fumigatus Photobiology Illuminates the Marked Heterogeneity between Isolates

(2016) Kevin K. Fuller et al.   mBio

Interactions of Aspergillus fumigatus Conidia with Airway Epithelial Cells: A Critical Review

(2016) Carys A. Croft et al.   Frontiers in Microbiology

Diverse Regulation of the CreA Carbon Catabolite Repressor in Aspergillus nidulans

(2016) Laure N. A. Ries et al.   GENETICS

Characterization of Aspergillus fumigatus Isolates from Air and Surfaces of the International Space Station

(2016) Benjamin P. Knox et al.   mSphere

Aspergillus fumigatus proteases, Asp f 5 and Asp f 13, are essential for airway inflammation and remodelling in a murine inhalation model

(2015) S. Namvar et al.   CLINICAL AND EXPERIMENTAL ALLERGY

The Aspergillus fumigatus sitA Phosphatase Homologue Is Important for Adhesion, Cell Wall Integrity, Biofilm Formation, and Virulence

(2015) Vinícius Leite Pedro Bom et al.   EUKARYOTIC CELL

Does implied community size predict likeability of a similar stranger?

(2015) Jacques Launay et al.   EVOLUTION AND HUMAN BEHAVIOR

Genome sequence comparison of Aspergillus fumigatus strains isolated from patients with pulmonary aspergilloma and chronic necrotizing pulmonary aspergillosis

(2015) Azusa Takahashi-Nakaguchi et al.   MEDICAL MYCOLOGY

Comparative proteomics of atorinducibleAspergillus fumigatusmutant reveals involvement of the Tor kinase in iron regulation

(2015) Clara Baldin et al.   PROTEOMICS

How to bolster the antifungal pipeline

(2015) D. W. Denning et al.   SCIENCE

Targeting zinc homeostasis to combat Aspergillus fumigatus infections

(2015) Rocío Vicentefranqueira et al.   Frontiers in Microbiology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Elucidation of primary metabolic pathways in Aspergillus species: Orphaned research in characterizing orphan genes

(2014) M. R. Andersen   Briefings in Functional Genomics

Regulatory Networks Controlling Nitrogen Sensing and Uptake in Candida albicans

(2014) Shruthi Ramachandra et al.   PLoS One

Identification and nomenclature of the genus Penicillium

(2014) C.M. Visagie et al.   STUDIES IN MYCOLOGY

Modulation of Phagosomal pH by Candida albicans Promotes Hyphal Morphogenesis and Requires Stp2p, a Regulator of Amino Acid Transport

(2014) Slavena Vylkova et al.   PLoS Pathogens

Overlapping and Distinct Roles ofAspergillus fumigatusUDP-glucose 4-Epimerases in Galactose Metabolism and the Synthesis of Galactose-containing Cell Wall Polysaccharides

(2013) Mark J. Lee et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Injuries

(2013) Robyn Norton et al.   NEW ENGLAND JOURNAL OF MEDICINE

Strain Dependent Variation of Immune Responses to A. fumigatus: Definition of Pathogenic Species

(2013) Lisa Rizzetto et al.   PLoS One

Comparative Studies of Copy Number Variation Detection Methods for Next-Generation Sequencing Technologies

(2013) Junbo Duan et al.   PLoS One

Deletion of the α-(1,3)-Glucan Synthase Genes Induces a Restructuring of the Conidial Cell Wall Responsible for the Avirulence of Aspergillus fumigatus

(2013) Anne Beauvais et al.   PLoS Pathogens

β-1,3-glucan modifying enzymes in Aspergillus fumigatus

(2013) Isabelle Mouyna et al.   Frontiers in Microbiology

Immunoproteomics based identification of thioredoxin reductase GliT and novel Aspergillus fumigatus antigens for serologic diagnosis of invasive aspergillosis

(2012) Li-ning Shi et al.   BMC MICROBIOLOGY

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Expression and secretion of Aspergillus fumigatus proteases are regulated in response to different protein substrates

(2012) Edward Farnell et al.   Fungal Biology

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

(2012) D. C. Koboldt et al.   GENOME RESEARCH

Biosynthesis of the Fungal Cell Wall Polysaccharide Galactomannan Requires Intraluminal GDP-mannose

(2012) Jakob Engel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Transcriptional and Proteomic Analysis of the Aspergillus fumigatus ΔprtT Protease-Deficient Mutant

(2012) Shelly Hagag et al.   PLoS One

Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data

(2011) Valentina Boeva et al.   BIOINFORMATICS

Immune responses against Aspergillus fumigatus

(2011) Robert A. Cramer et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Iron homeostasis—Achilles’ heel of Aspergillus fumigatus?

(2011) Markus Schrettl et al.   CURRENT OPINION IN MICROBIOLOGY

CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

(2011) A. Abyzov et al.   GENOME RESEARCH

Identification of virulence factors and diagnostic markers using immunosecretome of Aspergillus fumigatus

(2011) Awanit Kumar et al.   Journal of Proteomics

Identification of Fibrinogen-Binding Proteins of Aspergillus fumigatus Using Proteomic Approach

(2011) Santosh Kumar Upadhyay et al.   MYCOPATHOLOGIA

In vivo Hypoxia and a Fungal Alcohol Dehydrogenase Influence the Pathogenesis of Invasive Pulmonary Aspergillosis

(2011) Nora Grahl et al.   PLoS Pathogens

Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization

(2010) Valentina Boeva et al.   BIOINFORMATICS

Aspergillus fumigatus cell wall components differentially modulate host TLR2 and TLR4 responses

(2010) Louis Y.A. Chai et al.   MICROBES AND INFECTION

What makes Aspergillus fumigatus a successful pathogen? Genes and molecules involved in invasive aspergillosis

(2010) Ana Abad et al.   REVISTA IBEROAMERICANA DE MICOLOGIA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Pathogenesis of Aspergillus fumigatus in Invasive Aspergillosis

(2009) T. R. T. Dagenais et al.   CLINICAL MICROBIOLOGY REVIEWS

Aspergillus fumigatus: cell wall polysaccharides, their biosynthesis and organization

(2009) Amandine Gastebois et al.   Future Microbiology

A Regulator of Aspergillus fumigatus Extracellular Proteolytic Activity Is Dispensable for Virulence

(2009) A. Bergmann et al.   INFECTION AND IMMUNITY

Transcription Factor PrtT Controls Expression of Multiple Secreted Proteases in the Human Pathogenic Mold Aspergillus fumigatus

(2009) H. Sharon et al.   INFECTION AND IMMUNITY

Aspergillus fumigatusmetabolism: Clues to mechanisms ofin vivofungal growth and virulence

(2009) Sven D. Willger et al.   MEDICAL MYCOLOGY

Population structure and diversity of the pathogenic fungus Aspergillus fumigatus isolated from different sources and geographic origins

(2009) Esperanza Duarte-Escalante et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

The interaction of induction, repression and starvation in the regulation of extracellular proteases in Aspergillus nidulans: evidence for a role for CreA in the response to carbon starvation

(2008) Margaret E. Katz et al.   CURRENT GENETICS

Recent Advances in Nitrogen Regulation: a Comparison betweenSaccharomyces cerevisiaeand Filamentous Fungi

(2008) Koon Ho Wong et al.   EUKARYOTIC CELL

Gliotoxin Production inAspergillus fumigatusContributes to Host‐Specific Differences in Virulence

(2008) Sara Spikes et al.   JOURNAL OF INFECTIOUS DISEASES

Genes Differentially Expressed in Conidia and Hyphae of Aspergillus fumigatus upon Exposure to Human Neutrophils

(2008) Janyce A. Sugui et al.   PLoS One

Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus

(2008) Natalie D. Fedorova et al.   PLoS Genetics

Sub-Telomere Directed Gene Expression during Initiation of Invasive Aspergillosis

(2008) Andrew McDonagh et al.   PLoS Pathogens