High-density SNP map facilitates fine mapping of QTLs and candidate genes discovery for Aspergillus flavus resistance in peanut (Arachis hypogaea)

Identification of genomic regions and diagnostic markers for resistance to aflatoxin contamination in peanut (Arachis hypogaea L.)

(2019) Bolun Yu et al.   BMC GENETICS

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication

(2019) Weijian Zhuang et al.   NATURE GENETICS

Mitigating Aflatoxin Contamination in Groundnut through A Combination of Genetic Resistance and Post-Harvest Management Practices

(2019) Manish K. Pandey et al.   Toxins

Insight into Genes Regulating Postharvest Aflatoxin Contamination of Tetraploid Peanut from Transcriptional Profiling

(2018) Walid Korani et al.   GENETICS

Accelerating genetic gains in legumes for the development of prosperous smallholder agriculture: integrating genomics, phenotyping, systems modelling and agronomy

(2018) Rajeev K Varshney et al.   JOURNAL OF EXPERIMENTAL BOTANY

High-density genetic map using whole-genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut

(2018) Gaurav Agarwal et al.   PLANT BIOTECHNOLOGY JOURNAL

Insight into Genes Regulating Postharvest Aflatoxin Contamination of Tetraploid Peanut from Transcriptional Profiling

(2018) Walid Korani et al.   GENETICS

Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability

(2018) Jake C. Fountain et al.   Scientific Reports

Projections of primary liver cancer to 2030 in 30 countries worldwide

(2017) Patricia C. Valery et al.   HEPATOLOGY

Genetic mapping of yield traits using RIL population derived from Fuchuan Dahuasheng and ICG6375 of peanut (Arachis hypogaea L.)

(2017) Yuning Chen et al.   MOLECULAR BREEDING

Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits

(2017) Rajeev K Varshney et al.   NATURE GENETICS

QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.)

(2017) Manish K. Pandey et al.   PLANT BIOTECHNOLOGY JOURNAL

Peanuts that keep aflatoxin at bay: a threshold that matters

(2017) Kiran K. Sharma et al.   PLANT BIOTECHNOLOGY JOURNAL

Characterization of the maize lipoxygenase gene family in relation to aflatoxin accumulation resistance

(2017) Oluwaseun F. Ogunola et al.   PLoS One

Chromosomes A07 and A05 associated with stable and major QTLs for pod weight and size in cultivated peanut (Arachis hypogaea L.)

(2017) Huaiyong Luo et al.   THEORETICAL AND APPLIED GENETICS

Aflatoxin-free transgenic maize using host-induced gene silencing

(2017) Dhiraj Thakare et al.   Science Advances

Aspergillus flavus infection triggered immune responses and host-pathogen cross-talks in groundnut during in-vitro seed colonization

(2017) Spurthi N Nayak et al.   Scientific Reports

Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

(2016) Houmiao Wang et al.   BMC PLANT BIOLOGY

The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut

(2016) David John Bertioli et al.   NATURE GENETICS

Identification of lipoxygenase (LOX) genes from legumes and their responses in wild type and cultivated peanut upon Aspergillus flavus infection

(2016) Hui Song et al.   Scientific Reports

The calcium-dependent protein kinase (CDPK) and CDPK-related kinase gene families inHevea brasiliensis-comparison with five other plant species in structure, evolution, and expression

(2016) Xiao-Hu Xiao et al.   FEBS Open Bio

Quantitative Trait Locus Analysis of Late Leaf Spot Resistance and Plant-Type-Related Traits in Cultivated Peanut (Arachis hypogaea L.) under Multi-Environments

(2016) Xiaojing Zhou et al.   PLoS One

Development and deployment of a high-density linkage map identified quantitative trait loci for plant height in peanut (Arachis hypogaea L.)

(2016) Li Huang et al.   Scientific Reports

Prevalence and distribution of aflatoxin contamination in groundnut ( Arachis hypogaea L.) in Mali, West Africa

(2015) F. Waliyar et al.   CROP PROTECTION

High-density genetic map construction and identification of a locus controlling weeping trait in an ornamental woody plant (Prunus mume Sieb. et Zucc)

(2015) J. Zhang et al.   DNA RESEARCH

First insight into divergence, representation and chromosome distribution of reverse transcriptase fragments from L1 retrotransposons in peanut and wild relative species

(2015) Sergio Sebastián Samoluk et al.   GENETICA

Identification of low Ca2+stress-induced embryo apoptosis response genes inArachis hypogaeaby SSH-associated library lift (SSHaLL)

(2015) Hua Chen et al.   PLANT BIOTECHNOLOGY JOURNAL

The cytochrome P450 superfamily: Key players in plant development and defense

(2015) Jun XU et al.   Journal of Integrative Agriculture

A high-density genetic map of cucumber derived from Specific Length Amplified Fragment sequencing (SLAF-seq)

(2015) Xuewen Xu et al.   Frontiers in Plant Science

An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing

(2015) Qingzhen Wei et al.   BMC GENOMICS

Construction and Analysis of High-Density Linkage Map Using High-Throughput Sequencing Data

(2014) Dongyuan Liu et al.   PLoS One

A High-Density Genetic Map for Soybean Based on Specific Length Amplified Fragment Sequencing

(2014) Zhaoming Qi et al.   PLoS One

Marker-assisted introgression of a QTL region to improve rust resistance in three elite and popular varieties of peanut (Arachis hypogaea L.)

(2014) Rajeev K. Varshney et al.   THEORETICAL AND APPLIED GENETICS

Environmental influences on maize-Aspergillus flavus interactions and aflatoxin production

(2014) Jake C. Fountain et al.   Frontiers in Microbiology

Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics

(2013) Rajeev K. Varshney et al.   BIOTECHNOLOGY ADVANCES

Construction of a high-density genetic map for sesame based on large scale marker development by specific length amplified fragment (SLAF) sequencing

(2013) Yanxin Zhang et al.   BMC PLANT BIOLOGY

Integrated Consensus Map of Cultivated Peanut and Wild Relatives Reveals Structures of the A and B Genomes of Arachis and Divergence of the Legume Genomes

(2013) K. Shirasawa et al.   DNA RESEARCH

The E3 ubiquitin ligases RNF126 and Rabring7 regulate endosomal sorting of the epidermal growth factor receptor

(2013) C. J. Smith et al.   JOURNAL OF CELL SCIENCE

SLAF-seq: An Efficient Method of Large-Scale De Novo SNP Discovery and Genotyping Using High-Throughput Sequencing

(2013) Xiaowen Sun et al.   PLoS One

Correction: Construction of High-Density Genetic Linkage Maps and Mapping of Growth-Related Quantitative Trail Loci in the Japanese Flounder (Paralichthys olivaceus)

(2013) Wentao Song et al.   PLoS One

Draft genome of the kiwifruit Actinidia chinensis

(2013) Shengxiong Huang et al.   Nature Communications

High-throughput SNP genotyping in Cucurbita pepo for map construction and quantitative trait loci mapping

(2012) Cristina Esteras et al.   BMC GENOMICS

In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut

(2012) Kenta Shirasawa et al.   BMC PLANT BIOLOGY

Development and characterization of BAC-end sequence derived SSRs, and their incorporation into a new higher density genetic map for cultivated peanut (Arachis hypogaea L.)

(2012) Hui Wang et al.   BMC PLANT BIOLOGY

Proteomic Analysis Reveals an Aflatoxin-Triggered Immune Response in Cotyledons of Arachis hypogaea Infected with Aspergillus flavus

(2012) Zizhang Wang et al.   JOURNAL OF PROTEOME RESEARCH

An improved allele-specific PCR primer design method for SNP marker analysis and its application

(2012) Jing Liu et al.   Plant Methods

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Genomic Characterization of DArT Markers Based on High-Density Linkage Analysis and Physical Mapping to the Eucalyptus Genome

(2012) César D. Petroli et al.   PLoS One

The Pectin Lyases in Arabidopsis thaliana: Evolution, Selection and Expression Profiles

(2012) Jun Cao   PLoS One

Structural and Functional Discussion of the Tetra-Trico-Peptide Repeat, a Protein Interaction Module

(2012) Natalie Zeytuni et al.   STRUCTURE

Oxidative Stress and Antioxidant Defense

(2012) Esra Birben et al.   World Allergy Organization Journal

Advances in Arachis genomics for peanut improvement

(2011) Manish K. Pandey et al.   BIOTECHNOLOGY ADVANCES

Association of high viral load and abnormal liver function with high aflatoxin B1–albumin adduct levels in HIV-positive Ghanaians: preliminary observations

(2011) P.E. Jolly et al.   Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment

Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp.

(2011) Padmalatha Koilkonda et al.   MOLECULAR BREEDING

An integrated genetic linkage map of cultivated peanut (Arachis hypogaea L.) constructed from two RIL populations

(2011) Hongde Qin et al.   THEORETICAL AND APPLIED GENETICS

From SNPs to functional polymorphism: The insight into biotechnology applications

(2010) Pei-Yu Liao et al.   BIOCHEMICAL ENGINEERING JOURNAL

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

(2010) David L Hyten et al.   BMC GENOMICS

Global Burden of Aflatoxin-Induced Hepatocellular Carcinoma: A Risk Assessment

(2010) Yan Liu et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing

(2010) W. Xie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An overview of mycotoxin contamination in foods and its implications for human health

(2010) KRN Reddy et al.   Toxin Reviews

A model of interaction: Aflatoxins and hepatitis viruses in liver cancer aetiology and prevention

(2009) Christopher P. Wild et al.   CANCER LETTERS

Inactivation of the LipoxygenaseZmLOX3Increases Susceptibility of Maize toAspergillusspp.

(2009) Xiquan Gao et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae

(2009) M. C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Construction of Genetic Linkage Map Based on SSR Markers in Peanut (Arachis hypogaea L.)

(2008) Yan-bin HONG et al.   Agricultural Sciences in China

Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea)

(2008) Luu M Cuc et al.   BMC PLANT BIOLOGY

Impact of mycotoxins on human health in developing countries

(2008) G. S. Shephard   Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment

The first SSR-based genetic linkage map for cultivated groundnut (Arachis hypogaea L.)

(2008) R. K. Varshney et al.   THEORETICAL AND APPLIED GENETICS