An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing
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Title
An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing
Authors
Keywords
SLAF-seq, Genetic map, SNP, <em class=EmphasisTypeItalic >Cucumis sativus</em> L, QTL analysis
Journal
BMC GENOMICS
Volume 15, Issue 1, Pages 1158
Publisher
Springer Nature
Online
2015-06-18
DOI
10.1186/1471-2164-15-1158
References
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- (2012) Wanxing Wang et al. BMC GENOMICS
- Genomic scan for single nucleotide polymorphisms reveals patterns of divergence and gene flow between ecologically divergent species
- (2012) Kai N. Stölting et al. MOLECULAR ECOLOGY
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- (2012) Luming Yang et al. PLANT JOURNAL
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- (2011) Zhen Li et al. BMC GENOMICS
- Genome-wide genetic marker discovery and genotyping using next-generation sequencing
- (2011) John W. Davey et al. NATURE REVIEWS GENETICS
- The Genome Sequence of the North-European Cucumber (Cucumis sativus L.) Unravels Evolutionary Adaptation Mechanisms in Plants
- (2011) Rafał Wóycicki et al. PLoS One
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- Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
- (2010) Pablo F Cavagnaro et al. BMC GENOMICS
- Fine genetic mapping localizes cucumber scab resistance gene Ccu into an R gene cluster
- (2010) Houxiang Kang et al. THEORETICAL AND APPLIED GENETICS
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- (2009) Martin W Ganal et al. CURRENT OPINION IN PLANT BIOLOGY
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- (2009) Sanwen Huang et al. NATURE GENETICS
- Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing
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- An Integrated Genetic and Cytogenetic Map of the Cucumber Genome
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- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
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