Integrated multi-omics approaches to improve classification of chronic kidney disease
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Title
Integrated multi-omics approaches to improve classification of chronic kidney disease
Authors
Keywords
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Journal
Nature Reviews Nephrology
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-05-18
DOI
10.1038/s41581-020-0286-5
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Note: Only part of the references are listed.- Urinary Proteomics as a tool to Identify Kidney Responders to Dipeptidyl Peptidase-4 Inhibition. A Hypothesis-Generating Analysis from the MARLINA-T2D Trial
- (2019) Justyna Siwy et al. Proteomics Clinical Applications
- Low levels of urinary epidermal growth factor predict chronic kidney disease progression in children
- (2019) Karolis Azukaitis et al. KIDNEY INTERNATIONAL
- Big science and big data in nephrology
- (2019) Julio Saez-Rodriguez et al. KIDNEY INTERNATIONAL
- Differential network enrichment analysis reveals novel lipid pathways in chronic kidney disease
- (2019) Jing Ma et al. BIOINFORMATICS
- Urine tubular biomarkers and diabetic nephropathy
- (2019) Bancha Satirapoj et al. JOURNAL OF DIABETES AND ITS COMPLICATIONS
- MultiPLIER: A Transfer Learning Framework for Transcriptomics Reveals Systemic Features of Rare Disease
- (2019) Jaclyn N. Taroni et al. Cell Systems
- Minnow: a principled framework for rapid simulation of dscRNA-seq data at the read level
- (2019) Hirak Sarkar et al. BIOINFORMATICS
- A catalog of genetic loci associated with kidney function from analyses of a million individuals
- (2019) Matthias Wuttke et al. NATURE GENETICS
- The immune cell landscape in kidneys of patients with lupus nephritis
- (2019) Arnon Arazi et al. NATURE IMMUNOLOGY
- Pathway-level information extractor (PLIER) for gene expression data
- (2019) Weiguang Mao et al. NATURE METHODS
- Kidney organoids: accurate models or fortunate accidents
- (2019) Melissa H. Little et al. GENES & DEVELOPMENT
- Human kidney organoids: progress and remaining challenges
- (2019) Ryuichi Nishinakamura Nature Reviews Nephrology
- The single-cell transcriptomic landscape of early human diabetic nephropathy
- (2019) Parker C. Wilson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mapping eGFR loci to the renal transcriptome and phenome in the VA Million Veteran Program
- (2019) Jacklyn N. Hellwege et al. Nature Communications
- Urinary Epidermal Growth Factor/Creatinine Ratio and Graft Failure in Renal Transplant Recipients: A Prospective Cohort Study
- (2019) Manuela Yepes-Calderón et al. Journal of Clinical Medicine
- Rationale and design of the Transformative Research in Diabetic Nephropathy (TRIDENT) Study
- (2019) Raymond R. Townsend et al. KIDNEY INTERNATIONAL
- Urinary epidermal growth factor predicts renal prognosis in antineutrophil cytoplasmic antibody-associated vasculitis
- (2018) Liang Wu et al. ANNALS OF THE RHEUMATIC DISEASES
- Mechanisms of Renal Fibrosis
- (2018) Benjamin D. Humphreys Annual Review of Physiology
- High-Throughput Screening Enhances Kidney Organoid Differentiation from Human Pluripotent Stem Cells and Enables Automated Multidimensional Phenotyping
- (2018) Stefan M. Czerniecki et al. Cell Stem Cell
- Interleukin-1βActivates a MYC-Dependent Metabolic Switch in Kidney Stromal Cells Necessary for Progressive Tubulointerstitial Fibrosis
- (2018) Dario R. Lemos et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response
- (2018) Haojia Wu et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- A molecular morphometric approach to diabetic kidney disease can link structure to function and outcome
- (2018) Viji Nair et al. KIDNEY INTERNATIONAL
- Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets
- (2018) Ricard Argelaguet et al. Molecular Systems Biology
- Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk
- (2018) Jian Zhou et al. NATURE GENETICS
- Advances in predictive in vitro models of drug-induced nephrotoxicity
- (2018) Joanne Y.-C. Soo et al. Nature Reviews Nephrology
- Single-cell RNA sequencing for the study of development, physiology and disease
- (2018) S. Steven Potter Nature Reviews Nephrology
- JAK1/JAK2 inhibition by baricitinib in diabetic kidney disease: results from a Phase 2 randomized controlled clinical trial
- (2018) Katherine R Tuttle et al. NEPHROLOGY DIALYSIS TRANSPLANTATION
- Urinary epidermal growth factor as a prognostic marker for the progression of Alport syndrome in children
- (2018) Baihong Li et al. PEDIATRIC NEPHROLOGY
- Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- (2018) Jihwan Park et al. SCIENCE
- APOL1: The Balance Imposed by Infection, Selection, and Kidney Disease
- (2018) Pazit Beckerman et al. TRENDS IN MOLECULAR MEDICINE
- The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations
- (2018) Alexandra B. Keenan et al. Cell Systems
- An eQTL Landscape of Kidney Tissue in Human Nephrotic Syndrome
- (2018) Christopher E. Gillies et al. AMERICAN JOURNAL OF HUMAN GENETICS
- A CRISP(e)R view on kidney organoids allows generation of an induced pluripotent stem cell–derived kidney model for drug discovery
- (2018) Cecilia Boreström et al. KIDNEY INTERNATIONAL
- JAK-STAT signaling is activated in the kidney and peripheral blood cells of patients with focal segmental glomerulosclerosis
- (2018) Jianling Tao et al. KIDNEY INTERNATIONAL
- Renal compartment–specific genetic variation analyses identify new pathways in chronic kidney disease
- (2018) Chengxiang Qiu et al. NATURE MEDICINE
- From Molecules to Mechanisms: Functional Proteomics and Its Application to Renal Tubule Physiology
- (2018) Markus M. Rinschen et al. PHYSIOLOGICAL REVIEWS
- The impact of the General Data Protection Regulation on health research
- (2018) Victoria Chico BRITISH MEDICAL BULLETIN
- Hydroxypropyl-β-cyclodextrin protects from kidney disease in experimental Alport syndrome and focal segmental glomerulosclerosis
- (2018) Alla Mitrofanova et al. KIDNEY INTERNATIONAL
- Diagnostic Utility of Exome Sequencing for Kidney Disease
- (2018) Emily E. Groopman et al. NEW ENGLAND JOURNAL OF MEDICINE
- The Gene Ontology Resource: 20 years and still GOing strong
- (2018) NUCLEIC ACIDS RESEARCH
- Development cell by cell
- (2018) Elizabeth Pennisi SCIENCE
- (Re)Building a Kidney
- (2017) Leif Oxburgh et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Impaired β -Oxidation and Altered Complex Lipid Fatty Acid Partitioning with Advancing CKD
- (2017) Farsad Afshinnia et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Podocyte-specific JAK2 overexpression worsens diabetic kidney disease in mice
- (2017) Hongyu Zhang et al. KIDNEY INTERNATIONAL
- Challenges in conducting clinical trials in nephrology: conclusions from a Kidney Disease—Improving Global Outcomes (KDIGO) Controversies Conference
- (2017) Colin Baigent et al. KIDNEY INTERNATIONAL
- Interstitial fibrosis scored on whole-slide digital imaging of kidney biopsies is a predictor of outcome in proteinuric glomerulopathies
- (2017) Laura H Mariani et al. NEPHROLOGY DIALYSIS TRANSPLANTATION
- Update on clinical trials in systemic lupus erythematosus
- (2016) Sonali Narain et al. CURRENT OPINION IN RHEUMATOLOGY
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- (2016) Christopher E. Pedigo et al. JOURNAL OF CLINICAL INVESTIGATION
- Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder
- (2016) Arjun Krishnan et al. NATURE NEUROSCIENCE
- Expansion of the Gene Ontology knowledgebase and resources
- (2016) NUCLEIC ACIDS RESEARCH
- Balancing Benefits and Risks of Immortal Data
- (2015) Oscar A. Zarate et al. HASTINGS CENTER REPORT
- Glomerular Filtration Rate and Albuminuria for Detection and Staging of Acute and Chronic Kidney Disease in Adults
- (2015) Andrew S. Levey et al. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Renal involvement in lupus is characterized by unique DNA methylation changes in naïve CD4+ T cells
- (2015) Patrick Coit et al. JOURNAL OF AUTOIMMUNITY
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- (2015) J. W. Lee et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Understanding multicellular function and disease with human tissue-specific networks
- (2015) Casey S Greene et al. NATURE GENETICS
- Tissue transcriptome-driven identification of epidermal growth factor as a chronic kidney disease biomarker
- (2015) Wenjun Ju et al. Science Translational Medicine
- KDOQI US Commentary on the 2012 KDIGO Clinical Practice Guideline for the Evaluation and Management of CKD
- (2014) Lesley A. Inker et al. AMERICAN JOURNAL OF KIDNEY DISEASES
- Integrative Biology Identifies Shared Transcriptional Networks in CKD
- (2014) S. Martini et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Defective fatty acid oxidation in renal tubular epithelial cells has a key role in kidney fibrosis development
- (2014) Hyun Mi Kang et al. NATURE MEDICINE
- Similarity network fusion for aggregating data types on a genomic scale
- (2014) Bo Wang et al. NATURE METHODS
- The Landscape of Clinical Trials in Nephrology: A Systematic Review of ClinicalTrials.gov
- (2013) Jula K. Inrig et al. AMERICAN JOURNAL OF KIDNEY DISEASES
- The Kidney Disease Improving Global Outcomes (KDIGO) Guideline Update for Chronic Kidney Disease: Evolution not Revolution
- (2013) E. J. Lamb et al. CLINICAL CHEMISTRY
- Defining cell-type specificity at the transcriptional level in human disease
- (2013) Wenjun Ju et al. GENOME RESEARCH
- Design of the Nephrotic Syndrome Study Network (NEPTUNE) to evaluate primary glomerular nephropathy by a multidisciplinary approach
- (2013) Crystal A. Gadegbeku et al. KIDNEY INTERNATIONAL
- Treatment of systemic lupus erythematosus: new therapeutic avenues and blind alleys
- (2013) Aikaterini Thanou et al. Nature Reviews Rheumatology
- CKD273, a New Proteomics Classifier Assessing CKD and Its Prognosis
- (2013) Àngel Argilés et al. PLoS One
- Identifying Personal Genomes by Surname Inference
- (2013) M. Gymrek et al. SCIENCE
- Renal interstitial fibrosis
- (2012) Alton B. Farris et al. CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION
- Identification of Cross-Species Shared Transcriptional Networks of Diabetic Nephropathy in Human and Mouse Glomeruli
- (2012) Jeffrey B. Hodgin et al. DIABETES
- Diving Through the “-Omics”: The Case for Deep Phenotyping and Systems Epidemiology
- (2012) Robin Haring et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- Treatment of steroid-resistant nephrotic syndrome in children: new guidelines from KDIGO
- (2012) Rebecca M. Lombel et al. PEDIATRIC NEPHROLOGY
- Treatment of steroid-sensitive nephrotic syndrome: new guidelines from KDIGO
- (2012) Rebecca M. Lombel et al. PEDIATRIC NEPHROLOGY
- The GUDMAP database - an online resource for genitourinary research
- (2011) S. D. Harding et al. DEVELOPMENT
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
- Screening for CKD with eGFR: Doubts and Dangers
- (2008) R. J. Glassock et al. Clinical Journal of the American Society of Nephrology
- Enhanced Expression of Janus Kinase-Signal Transducer and Activator of Transcription Pathway Members in Human Diabetic Nephropathy
- (2008) C. C. Berthier et al. DIABETES
- GUDMAP: The Genitourinary Developmental Molecular Anatomy Project
- (2008) A. P. McMahon et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Defining human diabetic nephropathy on the molecular level: Integration of transcriptomic profiles with biological knowledge
- (2008) Sebastian Martini et al. REVIEWS IN ENDOCRINE & METABOLIC DISORDERS
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