Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease

Single-cell RNA-sequence analysis of mouse glomerular mesangial cells uncovers mesangial cell essential genes

(2017) Yuqiu Lu et al.   KIDNEY INTERNATIONAL

The Human Cell Atlas: from vision to reality

(2017) Orit Rozenblatt-Rosen et al.   NATURE

Genome-wide association analysis identifies novel blood pressure loci and offers biological insights into cardiovascular risk

(2017) Helen R Warren et al.   NATURE GENETICS

Reversed graph embedding resolves complex single-cell trajectories

(2017) Xiaojie Qiu et al.   NATURE METHODS

Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-seq

(2017) Lihe Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comprehensive single-cell transcriptional profiling of a multicellular organism

(2017) Junyue Cao et al.   SCIENCE

The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing

(2017) Ed Lein et al.   SCIENCE

Single-cell transcriptomics to explore the immune system in health and disease

(2017) Michael J. T. Stubbington et al.   SCIENCE

TheDrosophilaembryo at single-cell transcriptome resolution

(2017) Nikos Karaiskos et al.   SCIENCE

Massively parallel digital transcriptional profiling of single cells

(2017) Grace X. Y. Zheng et al.   Nature Communications

Transcription factor TFCP2L1 patterns cells in the mouse kidney collecting ducts

(2017) Max Werth et al.   eLife

Roles and Regulation of Renal K Channels

(2016) Paul A. Welling   Annual Review of Physiology

Cellular plasticity in kidney injury and repair

(2016) Monica Chang-Panesso et al.   Nature Reviews Nephrology

Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function

(2016) Cristian Pattaro et al.   Nature Communications

CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations

(2015) Maria Chikina et al.   BIOINFORMATICS

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

(2015) Evan Z. Macosko et al.   CELL

Notch1 and Notch2 in Podocytes Play Differential Roles During Diabetic Nephropathy Development

(2015) Mariya T. Sweetwyne et al.   DIABETES

Deep Sequencing in Microdissected Renal Tubules Identifies Nephron Segment-Specific Transcriptomes

(2015) J. W. Lee et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Spatial reconstruction of single-cell gene expression data

(2015) Rahul Satija et al.   NATURE BIOTECHNOLOGY

Systems biology of polycystic kidney disease: a critical review

(2015) Luis Fernando Menezes et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

Collecting Duct-Derived Cells Display Mesenchymal Stem Cell Properties and Retain Selective In Vitro and In Vivo Epithelial Capacity

(2014) J. Li et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

An atlas of genetic influences on human blood metabolites

(2014) So-Youn Shin et al.   NATURE GENETICS

Defective fatty acid oxidation in renal tubular epithelial cells has a key role in kidney fibrosis development

(2014) Hyun Mi Kang et al.   NATURE MEDICINE

ADCK4 “reenergizes” nephrotic syndrome

(2013) Laura Malaga-Dieguez et al.   JOURNAL OF CLINICAL INVESTIGATION

Aqp2-Expressing Cells Give Rise to Renal Intercalated Cells

(2013) H. Wu et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Regulation of Renal Potassium Secretion: Molecular Mechanisms

(2013) Paul A. Welling   SEMINARS IN NEPHROLOGY

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Epithelial Notch signaling regulates interstitial fibrosis development in the kidneys of mice and humans

(2010) Bernhard Bielesz et al.   JOURNAL OF CLINICAL INVESTIGATION

Genetic kidney diseases

(2010) Friedhelm Hildebrandt   LANCET

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Inactivation of Notch signaling in the renal collecting duct causes nephrogenic diabetes insipidus in mice

(2009) Hyun-Woo Jeong et al.   JOURNAL OF CLINICAL INVESTIGATION

The Immunological Genome Project: networks of gene expression in immune cells

(2008) Tracy S P Heng et al.   NATURE IMMUNOLOGY