Parallel evolutionary paths to produce more than one Pseudomonas aeruginosa biofilm phenotype
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Parallel evolutionary paths to produce more than one Pseudomonas aeruginosa biofilm phenotype
Authors
Keywords
-
Journal
npj Biofilms and Microbiomes
Volume 6, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-01-10
DOI
10.1038/s41522-019-0113-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Establishment of an induced memory response in Pseudomonas aeruginosa during infection of a eukaryotic host
- (2019) Adrian Kordes et al. ISME Journal
- In Vivo Proteome of Pseudomonas aeruginosa in Airways of Cystic Fibrosis Patients
- (2019) Xia Wu et al. JOURNAL OF PROTEOME RESEARCH
- Genetically diverse Pseudomonas aeruginosa populations display similar transcriptomic profiles in a cystic fibrosis explanted lung
- (2019) Adrian Kordes et al. Nature Communications
- The Core Proteome of Biofilm-Grown Clinical Pseudomonas aeruginosa Isolates
- (2019) Jelena Erdmann et al. Cells
- Quantitative Proteomics of Strong and Weak Biofilm Formers ofEnterococcus faecalisReveals Novel Regulators of Biofilm Formation
- (2018) Tanujaa Suriyanarayanan et al. MOLECULAR & CELLULAR PROTEOMICS
- Pseudomonas aeruginosatranscriptome during human infection
- (2018) Daniel M. Cornforth et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genomic and environmental determinants and their interplay underlying phenotypic plasticity
- (2018) Xin Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- 2,3-Butanediol catabolism in Pseudomonas aeruginosa PAO1
- (2018) Qiuyuan Liu et al. ENVIRONMENTAL MICROBIOLOGY
- OUP accepted manuscript
- (2018) NUCLEIC ACIDS RESEARCH
- High-resolution in situ transcriptomics of Pseudomonas aeruginosa unveils genotype independent patho-phenotypes in cystic fibrosis lungs
- (2018) Elio Rossi et al. Nature Communications
- The Gene Ontology Resource: 20 years and still GOing strong
- (2018) NUCLEIC ACIDS RESEARCH
- Comparative transcriptomics in human and mouse
- (2017) Alessandra Breschi et al. NATURE REVIEWS GENETICS
- Transcriptional Profiling of Biofilm Regulators Identified by an Overexpression Screen in Saccharomyces cerevisiae
- (2017) Gareth A. Cromie et al. G3-Genes Genomes Genetics
- Towards individualized diagnostics of biofilm-associated infections: a case study
- (2017) Mathias Müsken et al. npj Biofilms and Microbiomes
- Pseudomonas aeruginosa Evolutionary Adaptation and Diversification in Cystic Fibrosis Chronic Lung Infections
- (2016) Craig Winstanley et al. TRENDS IN MICROBIOLOGY
- ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data
- (2016) Guangchuang Yu et al. Methods in Ecology and Evolution
- The LasB Elastase of Pseudomonas aeruginosa Acts in Concert with Alkaline Protease AprA To Prevent Flagellin-Mediated Immune Recognition
- (2015) Fiordiligie Casilag et al. INFECTION AND IMMUNITY
- Pel is a cationic exopolysaccharide that cross-links extracellular DNA in thePseudomonas aeruginosabiofilm matrix
- (2015) Laura K. Jennings et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Pseudomonas aeruginosa Transcriptional Landscape Is Shaped by Environmental Heterogeneity and Genetic Variation
- (2015) Andreas Dötsch et al. mBio
- Rethinking phenotypic plasticity and its consequences for individuals, populations and species
- (2014) A Forsman HEREDITY
- Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis
- (2014) Rasmus Lykke Marvig et al. NATURE GENETICS
- Evaluation of Whole Genome Sequencing for Outbreak Detection of Salmonella enterica
- (2014) Pimlapas Leekitcharoenphon et al. PLoS One
- Recycling of Peptidyl-tRNAs by Peptidyl-tRNA Hydrolase Counteracts Azithromycin-Mediated Effects on Pseudomonas aeruginosa
- (2013) Julia Gödeke et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- The role of bacterial biofilms in chronic infections
- (2013) Thomas Bjarnsholt APMIS
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- Biofilm Matrix and Its Regulation in Pseudomonas aeruginosa
- (2013) Qing Wei et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Identification of the Alternative Sigma Factor SigX Regulon and Its Implications for Pseudomonas aeruginosa Pathogenicity
- (2013) A. Blanka et al. JOURNAL OF BACTERIOLOGY
- The MerR-Like Regulator BrlR Confers Biofilm Tolerance by Activating Multidrug Efflux Pumps in Pseudomonas aeruginosa Biofilms
- (2013) J. Liao et al. JOURNAL OF BACTERIOLOGY
- Pseudomonas aeruginosa: new insights into pathogenesis and host defenses
- (2013) Shaan L. Gellatly et al. Pathogens and Disease
- The peptide chain release factor methyltransferase PrmC is essential for pathogenicity and environmental adaptation ofPseudomonas aeruginosaPA14
- (2012) Christian Pustelny et al. ENVIRONMENTAL MICROBIOLOGY
- Phenotypes selected during chronic lung infection in cystic fibrosis patients: implications for the treatment ofPseudomonas aeruginosabiofilm infections
- (2012) Oana Ciofu et al. FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY
- Sticky Situations: Key Components That Control Bacterial Surface Attachment
- (2012) O. E. Petrova et al. JOURNAL OF BACTERIOLOGY
- The Biofilm-Specific Antibiotic Resistance Gene ndvB Is Important for Expression of Ethanol Oxidation Genes in Pseudomonas aeruginosa Biofilms
- (2012) T. Beaudoin et al. JOURNAL OF BACTERIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective
- (2012) Anders Folkesson et al. NATURE REVIEWS MICROBIOLOGY
- The FleQ protein from Pseudomonas aeruginosa functions as both a repressor and an activator to control gene expression from the pel operon promoter in response to c-di-GMP
- (2012) C. Baraquet et al. NUCLEIC ACIDS RESEARCH
- Redundant phenazine operons in Pseudomonas aeruginosa exhibit environment-dependent expression and differential roles in pathogenicity
- (2012) D. A. Recinos et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolution of virulence in opportunistic pathogens: generalism, plasticity, and control
- (2012) Sam P. Brown et al. TRENDS IN MICROBIOLOGY
- From Environment to Man: Genome Evolution and Adaptation of Human Opportunistic Bacterial Pathogens
- (2012) Fabien Aujoulat et al. Genes
- Pseudomonas aeruginosaPopulation Diversity and Turnover in Cystic Fibrosis Chronic Infections
- (2011) Eilidh Mowat et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
- (2011) H. Li BIOINFORMATICS
- The clinical impact of bacterial biofilms
- (2011) Niels Høiby et al. International Journal of Oral Science
- Pseudomonas aeruginosa Genomic Structure and Diversity
- (2011) Jens Klockgether et al. Frontiers in Microbiology
- Microtiter Dish Biofilm Formation Assay
- (2011) George A. O'Toole Jove-Journal of Visualized Experiments
- Antibiotic resistance of bacterial biofilms
- (2010) Niels Høiby et al. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate
- (2010) Christian Spangler et al. JOURNAL OF MICROBIOLOGICAL METHODS
- A 96-well-plate–based optical method for the quantitative and qualitative evaluation of Pseudomonas aeruginosa biofilm formation and its application to susceptibility testing
- (2010) Mathias Müsken et al. Nature Protocols
- Phenotypic plasticity in development and evolution: facts and concepts
- (2010) G. Fusco et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Comparative microarray analysis reveals that the core biofilm-associated transcriptome of Pseudomonas aeruginosa comprises relatively few genes
- (2010) Sanaya Patell et al. Environmental Microbiology Reports
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Quorum sensing and environmental adaptation in Pseudomonas aeruginosa: a tale of regulatory networks and multifunctional signal molecules
- (2009) Paul Williams et al. CURRENT OPINION IN MICROBIOLOGY
- Genetic determinants of Pseudomonas aeruginosa biofilm establishment
- (2009) M. Musken et al. MICROBIOLOGY-SGM
- BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
- (2008) Tim Hulsen et al. BMC GENOMICS
- P. aeruginosa Biofilms in CF Infection
- (2008) Victoria E. Wagner et al. CLINICAL REVIEWS IN ALLERGY & IMMUNOLOGY
- Swarming of Pseudomonas aeruginosa Is a Complex Adaptation Leading to Increased Production of Virulence Factors and Antibiotic Resistance
- (2008) J. Overhage et al. JOURNAL OF BACTERIOLOGY
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started