Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
Authors
Keywords
-
Journal
mSystems
Volume 4, Issue 6, Pages -
Publisher
American Society for Microbiology
Online
2019-12-02
DOI
10.1128/msystems.00320-19
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Wetland Sediments Host Diverse Microbial Taxa Capable of Cycling Alcohols
- (2019) Paula Dalcin Martins et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A “Cultural” Renaissance: Genomics Breathes New Life into an Old Craft
- (2019) Paul Carini mSystems
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
- (2019) Evan Bolyen et al. NATURE BIOTECHNOLOGY
- Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions
- (2019) Natalia García-García et al. ISME Journal
- High proportions of bacteria and archaea across most biomes remain uncultured
- (2019) Andrew D. Steen et al. ISME Journal
- Increases in temperature and nutrient availability positively affect methane cycling mircoorganisms in arctic thermokarst lake sediments
- (2018) Anniek E. E. de Jong et al. ENVIRONMENTAL MICROBIOLOGY
- Methanol metabolism in the acetogenic bacterium Acetobacterium woodii
- (2018) Florian Kremp et al. ENVIRONMENTAL MICROBIOLOGY
- Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
- (2018) Mikayla A. Borton et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Methane Feedbacks to the Global Climate System in a Warmer World
- (2018) Joshua F. Dean et al. REVIEWS OF GEOPHYSICS
- A global atlas of the dominant bacteria found in soil
- (2018) Manuel Delgado-Baquerizo et al. SCIENCE
- Methylotrophic methanogenesis in Sphagnum -dominated peatland soils
- (2018) C.A. Zalman et al. SOIL BIOLOGY & BIOCHEMISTRY
- The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways
- (2018) Diana Z. Sousa et al. Nature Communications
- Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
- (2018) Kateryna Zhalnina et al. Nature Microbiology
- Complex Evolutionary History of Translation Elongation Factor 2 and Diphthamide Biosynthesis in Archaea and Parabasalids
- (2018) Adrienne B Narrowe et al. Genome Biology and Evolution
- Microbial trimethylamine metabolism in marine environments
- (2018) Jing Sun et al. ENVIRONMENTAL MICROBIOLOGY
- Comparative genomics and physiology of the genus Methanohalophilus , a prevalent methanogen in hydraulically fractured shale
- (2018) Mikayla A. Borton et al. ENVIRONMENTAL MICROBIOLOGY
- Members of the Genus Methylobacter Are Inferred To Account for the Majority of Aerobic Methane Oxidation in Oxic Soils from a Freshwater Wetland
- (2018) Garrett J. Smith et al. mBio
- Thermodynamically diverse syntrophic aromatic compound catabolism
- (2017) Masaru Konishi Nobu et al. ENVIRONMENTAL MICROBIOLOGY
- High-resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils
- (2017) Adrienne B. Narrowe et al. ENVIRONMENTAL MICROBIOLOGY
- The growing tree of Archaea: new perspectives on their diversity, evolution and ecology
- (2017) Panagiotis S Adam et al. ISME Journal
- UFBoot2: Improving the Ultrafast Bootstrap Approximation
- (2017) Diep Thi Hoang et al. MOLECULAR BIOLOGY AND EVOLUTION
- ModelFinder: fast model selection for accurate phylogenetic estimates
- (2017) Subha Kalyaanamoorthy et al. NATURE METHODS
- In-depth analysis of core methanogenic communities from high elevation permafrost-affected wetlands
- (2017) Sizhong Yang et al. SOIL BIOLOGY & BIOCHEMISTRY
- Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions
- (2017) Jordan C. Angle et al. Nature Communications
- Growth Characteristics of Methanomassiliicoccus luminyensis and Expression of Methyltransferase Encoding Genes
- (2017) Lena Kröninger et al. ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL
- The growing role of methane in anthropogenic climate change
- (2016) M Saunois et al. Environmental Research Letters
- Near-optimal probabilistic RNA-seq quantification
- (2016) Nicolas L Bray et al. NATURE BIOTECHNOLOGY
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- The complete genome sequence of the methanogenic archaeon ISO4-H5 provides insights into the methylotrophic lifestyle of a ruminal representative of the Methanomassiliicoccales
- (2016) Yang Li et al. Standards in Genomic Sciences
- Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
- (2016) Inka Vanwonterghem et al. Nature Microbiology
- Unravelling the one-carbon metabolism of the acetogen S poromusa strain An4 by genome and proteome analysis
- (2015) Michael Visser et al. ENVIRONMENTAL MICROBIOLOGY
- Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
- (2015) P. N. Evans et al. SCIENCE
- Metatranscriptomic Analysis of Arctic Peat Soil Microbiota
- (2014) Alexander T. Tveit et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- New Mode of Energy Metabolism in the Seventh Order of Methanogens as Revealed by Comparative Genome Analysis of “Candidatus Methanoplasma termitum”
- (2014) Kristina Lang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine
- (2014) Guillaume Borrel et al. BMC GENOMICS
- Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave
- (2014) Daniela Wischer et al. ISME Journal
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity
- (2014) A. Shade et al. mBio
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Stable Carbon Isotope Fractionation by Methylotrophic Methanogenic Archaea
- (2012) Jörn Penger et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- “Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens
- (2012) Kristina Paul et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
- (2012) Y. Peng et al. BIOINFORMATICS
- Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales
- (2012) Scott D. Bridgham et al. GLOBAL CHANGE BIOLOGY
- Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
- (2012) J Gregory Caporaso et al. ISME Journal
- Production and consumption of methane in freshwater lake ecosystems
- (2011) Guillaume Borrel et al. RESEARCH IN MICROBIOLOGY
- Freshwater Methane Emissions Offset the Continental Carbon Sink
- (2011) D. Bastviken et al. SCIENCE
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- Metagenomic biomarker discovery and explanation
- (2011) Nicola Segata et al. GENOME BIOLOGY
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- Methane Emissions From Created Riverine Wetlands
- (2010) Amanda M. Nahlik et al. WETLANDS
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Aerobic methanol-oxidizingBacteriaâin soil
- (2009) Steffen Kolb FEMS MICROBIOLOGY LETTERS
- Methanol as the Primary Methanogenic and Acetogenic Precursor in the Cold Zoige Wetland at Tibetan Plateau
- (2009) Na Jiang et al. MICROBIAL ECOLOGY
- Methanogenesis from Methanol at Low Temperatures by a Novel Psychrophilic Methanogen, "Methanolobus psychrophilus" sp. nov., Prevalent in Zoige Wetland of the Tibetan Plateau
- (2008) G. Zhang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Methanogen community in Zoige wetland of Tibetan plateau and phenotypic characterization of a dominant uncultured methanogen cluster ZC-I
- (2008) Guishan Zhang et al. ENVIRONMENTAL MICROBIOLOGY
- Methanogenic archaea: ecologically relevant differences in energy conservation
- (2008) Rudolf K. Thauer et al. NATURE REVIEWS MICROBIOLOGY
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started