Comparative genomics and physiology of the genus Methanohalophilus , a prevalent methanogen in hydraulically fractured shale

Type and amount of organic amendments affect enhanced biogenic methane production from coal and microbial community structure

(2018) Katherine J. Davis et al.   FUEL

Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales

(2018) Mikayla A. Borton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking pangenomes and metagenomes: the Prochlorococcus metapangenome

(2018) Tom O. Delmont et al.   PeerJ

Archaeal biofilm formation

(2018) Marleen van Wolferen et al.   NATURE REVIEWS MICROBIOLOGY

Naturally Occurring versus Anthropogenic Sources of Elevated Molybdenum in Groundwater: Evidence for Geogenic Contamination from Southeast Wisconsin, United States

(2017) Jennifer S. Harkness et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

High abundance and expression of transposases in bacteria from the Baltic Sea

(2017) Theoden Vigil-Stenman et al.   ISME Journal

Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions

(2017) Jordan C. Angle et al.   Nature Communications

Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life

(2017) Donovan H. Parks et al.   Nature Microbiology

Sulfide Generation by Dominant Halanaerobium Microorganisms in Hydraulically Fractured Shales

(2017) Anne E. Booker et al.   mSphere

Quantitative Survey and Structural Classification of Hydraulic Fracturing Chemicals Reported in Unconventional Gas Production

(2016) Martin Elsner et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Biogenic methane production from coal: A review on recent research and development on microbially enhanced coalbed methane (MECBM)

(2016) Stephen Y. Park et al.   FUEL

High-resolution phylogenetic microbial community profiling

(2016) Esther Singer et al.   ISME Journal

New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11

(2016) Lindsey M Solden et al.   ISME Journal

Molecular recordings by directed CRISPR spacer acquisition

(2016) Seth L. Shipman et al.   SCIENCE

Metabolic Capability of a Predominant Halanaerobium sp. in Hydraulically Fractured Gas Wells and Its Implication in Pipeline Corrosion

(2016) Renxing Liang et al.   Frontiers in Microbiology

Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales

(2016) Rebecca A. Daly et al.   Nature Microbiology

Organic and inorganic composition and microbiology of produced waters from Pennsylvania shale gas wells

(2015) Denise M. Akob et al.   APPLIED GEOCHEMISTRY

Methanogenic Archaea in Marcellus Shale: A Possible Mechanism for Enhanced Gas Recovery in Unconventional Shale Resources

(2015) Yael Tarlovsky Tucker et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The evolution of Devonian hydrocarbon gases in shallow aquifers of the northern Appalachian Basin: Insights from integrating noble gas and hydrocarbon geochemistry

(2015) Thomas H. Darrah et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Enhanced microbial coalbed methane generation: A review of research, commercial activity, and remaining challenges

(2015) Daniel Ritter et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY

An updated evolutionary classification of CRISPR–Cas systems

(2015) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

The CRISPR-associated Csx1 protein ofPyrococcus furiosusis an adenosine-specific endoribonuclease

(2015) Nolan F. Sheppard et al.   RNA

Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range

(2015) Gemma Henderson et al.   Scientific Reports

Performance of genetic programming optimised Bowtie2 on genome comparison and analytic testing (GCAT) benchmarks

(2015) W B Langdon   BioData Mining

Anvi’o: an advanced analysis and visualization platform for ‘omics data

(2015) A. Murat Eren et al.   PeerJ

ITEP: An integrated toolkit for exploration of microbial pan-genomes

(2014) Matthew N Benedict et al.   BMC GENOMICS

Temporal Changes in Microbial Ecology and Geochemistry in Produced Water from Hydraulically Fractured Marcellus Shale Gas Wells

(2014) Maryam A. Cluff et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Produced Water Exposure Alters Bacterial Response to Biocides

(2014) Amit Vikram et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A Critical Review of the Risks to Water Resources from Unconventional Shale Gas Development and Hydraulic Fracturing in the United States

(2014) Avner Vengosh et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Methanohalophilus levihalophilus sp. nov., a slightly halophilic, methylotrophic methanogen isolated from natural gas-bearing deep aquifers, and emended description of the genus Methanohalophilus

(2014) T. Katayama et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Evidence for extensive gene flow and Thermotoga subpopulations in subsurface and marine environments

(2014) Camilla L Nesbø et al.   ISME Journal

Prochlorococcus: the structure and function of collective diversity

(2014) Steven J. Biller et al.   NATURE REVIEWS MICROBIOLOGY

A nonpyrrolysine member of the widely distributed trimethylamine methyltransferase family is a glycine betaine methyltransferase

(2014) T. Ticak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial communities evolve faster in extreme environments

(2014) Sheng-Jin Li et al.   Scientific Reports

Microbial Community Changes in Hydraulic Fracturing Fluids and Produced Water from Shale Gas Extraction

(2013) Arvind Murali Mohan et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbial communities in flowback water impoundments from hydraulic fracturing for recovery of shale gas

(2013) Arvind Murali Mohan et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial diversity and methanogenic activity of Antrim Shale formation waters from recently fractured wells

(2013) Cornelia Wuchter et al.   Frontiers in Microbiology

Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2

(2012) Martin Wu et al.   BIOINFORMATICS

Gene and translation initiation site prediction in metagenomic sequences

(2012) Doug Hyatt et al.   BIOINFORMATICS

New gas material balance to quantify biogenic gas generation rates from shallow organic-matter-rich shales

(2012) M. Cokar et al.   FUEL

Bacterial Communities Associated with Production Facilities of Two Newly Drilled Thermogenic Natural Gas Wells in the Barnett Shale (Texas, USA)

(2012) James P. Davis et al.   MICROBIAL ECOLOGY

Influence of the Drilling Mud Formulation Process on the Bacterial Communities in Thermogenic Natural Gas Wells of the Barnett Shale

(2011) Christopher G. Struchtemeyer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Activation of Methanogenesis in Arid Biological Soil Crusts Despite the Presence of Oxygen

(2011) Roey Angel et al.   PLoS One

Bacteria-Phage Antagonistic Coevolution in Soil

(2011) P. Gomez et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Natural Gas Plays in the Marcellus Shale: Challenges and Potential Opportunities

(2010) David M. Kargbo et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The biofilm matrix

(2010) Hans-Curt Flemming et al.   NATURE REVIEWS MICROBIOLOGY

Natural Gas From Shale Bursts Onto the Scene

(2010) R. A. Kerr   SCIENCE

From complete genome sequence to ‘complete’ understanding?

(2010) Michael Y. Galperin et al.   TRENDS IN BIOTECHNOLOGY

The Genome Sequence ofMethanohalophilus mahiiSLPTReveals Differences in the Energy Metabolism among Members of theMethanosarcinaceaeInhabiting Freshwater and Saline Environments

(2010) Stefan Spring et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Nasty Viruses, Costly Plasmids, Population Dynamics, and the Conditions for Establishing and Maintaining CRISPR-Mediated Adaptive Immunity in Bacteria

(2010) Bruce R. Levin   PLoS Genetics

Joint sets that enhance production from Middle and Upper Devonian gas shales of the Appalachian Basin

(2009) Terry Engelder et al.   AAPG BULLETIN