High fat diet induces microbiota-dependent silencing of enteroendocrine cells

Intestinal Serum amyloid A suppresses systemic neutrophil activation and bactericidal activity in response to microbiota colonization

(2019) Caitlin C. Murdoch et al.   PLoS Pathogens

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Epithelial delamination is protective during pharmaceutical-induced enteropathy

(2019) Scott T. Espenschied et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lysosome-Rich Enterocytes Mediate Protein Absorption in the Vertebrate Gut

(2019) Jieun Park et al.   DEVELOPMENTAL CELL

Small Intestine Microbiota Regulate Host Digestive and Absorptive Adaptive Responses to Dietary Lipids

(2018) Kristina Martinez-Guryn et al.   Cell Host & Microbe

Metformin Alters Upper Small Intestinal Microbiota that Impact a Glucose-SGLT1-Sensing Glucoregulatory Pathway

(2018) Paige V. Bauer et al.   Cell Metabolism

GPCR desensitization: Acute and prolonged phases

(2018) Sudarshan Rajagopal et al.   CELLULAR SIGNALLING

Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling

(2018) Joshua V. Troll et al.   DEVELOPMENT

Deep phenotyping in zebrafish reveals genetic and diet-induced adiposity changes that may inform disease risk

(2018) James E.N. Minchin et al.   JOURNAL OF LIPID RESEARCH

Contributions of ferric uptake regulator Fur to the sensitivity and oxidative response of Acinetobacter baumannii to antibiotics

(2018) T.O. Ajiboye et al.   MICROBIAL PATHOGENESIS

N-Acetylcysteine Reverses Anxiety and Oxidative Damage Induced by Unpredictable Chronic Stress in Zebrafish

(2018) Ricieri Mocelin et al.   MOLECULAR NEUROBIOLOGY

Microbial regulation of the L cell transcriptome

(2018) Tulika Arora et al.   Scientific Reports

A gut-brain neural circuit for nutrient sensory transduction

(2018) Melanie Maya Kaelberer et al.   SCIENCE

Bidirectional gut-brain-microbiota axis as a potential link between inflammatory bowel disease and ischemic stroke

(2018) Liang Zhao et al.   Journal of Neuroinflammation

Dietary fat: From foe to friend?

(2018) David S. Ludwig et al.   SCIENCE

Degradation Paradigm of the Gut Hormone, Pancreatic Polypeptide, by Hepatic and Renal Peptidases

(2017) Joyceline Cuenco et al.   ENDOCRINOLOGY

Discovery, characterization, and clinical development of the glucagon-like peptides

(2017) Daniel J. Drucker et al.   JOURNAL OF CLINICAL INVESTIGATION

In vitro study of virulence potential of Acinetobacter baumannii outer membrane vesicles

(2017) Chandana Jha et al.   MICROBIAL PATHOGENESIS

Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model

(2017) Adam R. Burns et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic dissection of conserved transcriptional regulation in intestinal epithelial cells

(2017) Colin R. Lickwar et al.   PLOS BIOLOGY

Biology of Acinetobacter baumannii: Pathogenesis, Antibiotic Resistance Mechanisms, and Prospective Treatment Options

(2017) Chang-Ro Lee et al.   Frontiers in Cellular and Infection Microbiology

Lipid Uptake, Metabolism, and Transport in the Larval Zebrafish

(2017) Vanessa H. Quinlivan et al.   Frontiers in Endocrinology

Chemical chaperone, TUDCA unlike PBA, mitigates protein aggregation efficiently and resists ER and non-ER stress induced HepG2 cell death

(2017) Jagadeesh Kumar Uppala et al.   Scientific Reports

Enteroendocrine Cells: Chemosensors in the Intestinal Epithelium

(2016) Fiona M. Gribble et al.   Annual Review of Physiology

Identification, visualization and clonal analysis of intestinal stem cells in fish

(2016) Narges Aghaallaei et al.   DEVELOPMENT

Sodium glucose cotransporter SGLT1 as a therapeutic target in diabetes mellitus

(2016) Panai Song et al.   EXPERT OPINION ON THERAPEUTIC TARGETS

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

High fat diet impairs the function of glucagon-like peptide-1 producing L-cells

(2016) Paul Richards et al.   PEPTIDES

Remote z-scanning with a macroscopic voice coil motor for fast 3D multiphoton laser scanning microscopy

(2016) Peter Rupprecht et al.   Biomedical Optics Express

glucagon is essential for alpha cell transdifferentiation and beta cell neogenesis

(2015) L. Ye et al.   DEVELOPMENT

The composition of the zebrafish intestinal microbial community varies across development

(2015) W Zac Stephens et al.   ISME Journal

Neuroepithelial circuit formed by innervation of sensory enteroendocrine cells

(2015) Diego V. Bohórquez et al.   JOURNAL OF CLINICAL INVESTIGATION

Endoplasmic Reticulum Stress–Induced IRE1α Activation Mediates Cross-Talk of GSK-3β and XBP-1 To Regulate Inflammatory Cytokine Production

(2015) Sena Kim et al.   JOURNAL OF IMMUNOLOGY

A transgenic zebrafish model for monitoring xbp1 splicing and endoplasmic reticulum stress in vivo

(2015) Junling Li et al.   MECHANISMS OF DEVELOPMENT

Enteroendocrine cells: a review of their role in brain-gut communication

(2015) R. Latorre et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Physiology of Proglucagon Peptides: Role of Glucagon and GLP-1 in Health and Disease

(2015) Darleen A. Sandoval et al.   PHYSIOLOGICAL REVIEWS

Ontogenetic Differences in Dietary Fat Influence Microbiota Assembly in the Zebrafish Gut

(2015) Sandi Wong et al.   mBio

Characterising the bacterial microbiota across the gastrointestinal tracts of dairy cattle: membership and potential function

(2015) Shengyong Mao et al.   Scientific Reports

Rapid analysis of hypolipidemic drugs in a live zebrafish assay

(2015) Juan Zhou et al.   JOURNAL OF PHARMACOLOGICAL AND TOXICOLOGICAL METHODS

ROS Function in Redox Signaling and Oxidative Stress

(2014) Michael Schieber et al.   CURRENT BIOLOGY

Axon and dendrite pruning in Drosophila

(2014) Fengwei Yu et al.   CURRENT OPINION IN NEUROBIOLOGY

Comparative studies of Toll-like receptor signalling using zebrafish

(2014) Zakia Kanwal et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

CtBP and Associated LSD1 Are Required for Transcriptional Activation by NeuroD1 in Gastrointestinal Endocrine Cells

(2014) S. K. Ray et al.   MOLECULAR AND CELLULAR BIOLOGY

The gut microbiota engages different signaling pathways to induce Duox2 expression in the ileum and colon epithelium

(2014) F Sommer et al.   Mucosal Immunology

The Role of SGLT1 and GLUT2 in Intestinal Glucose Transport and Sensing

(2014) Pia V. Röder et al.   PLoS One

The Influence of Dietary Fat on Liver Fat Accumulation

(2014) Charlotte Green et al.   Nutrients

Toll-Like Receptor Signaling Pathways

(2014) Takumi Kawasaki et al.   Frontiers in Immunology

Cftr controls lumen expansion and function of Kupffer's vesicle in zebrafish

(2013) A. Navis et al.   DEVELOPMENT

Immunoglobulin-like domain containing receptor 1 mediates fat-stimulated cholecystokinin secretion

(2013) Rashmi Chandra et al.   JOURNAL OF CLINICAL INVESTIGATION

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

The gut as a sensory organ

(2013) John B. Furness et al.   Nature Reviews Gastroenterology & Hepatology

Acinetobacter baumannii Outer Membrane Vesicles Elicit a Potent Innate Immune Response via Membrane Proteins

(2013) So Hyun Jun et al.   PLoS One

Compartmentalized Calcium Transients Trigger Dendrite Pruning in Drosophila Sensory Neurons

(2013) T. Kanamori et al.   SCIENCE

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Microbiota Regulate Intestinal Absorption and Metabolism of Fatty Acids in the Zebrafish

(2012) Ivana Semova et al.   Cell Host & Microbe

Reactive Oxygen Production Induced by the Gut Microbiota: Pharmacotherapeutic Implications

(2012) R. M. Jones et al.   CURRENT MEDICINAL CHEMISTRY

Notch signaling differentially regulates the cell fate of early endocrine precursor cells and their maturing descendants in the mouse pancreas and intestine

(2012) Hui Joyce Li et al.   DEVELOPMENTAL BIOLOGY

Nutrient Excess Stimulates  -Cell Neogenesis in Zebrafish

(2012) L. A. Maddison et al.   DIABETES

GLP-1 and GLP-2 as Yin and Yang of Intestinal Lipoprotein Production: Evidence for Predominance of GLP-2-Stimulated Postprandial Lipemia in Normal and Insulin-Resistant States

(2012) G. J. Hein et al.   DIABETES

The unfolded protein response: controlling cell fate decisions under ER stress and beyond

(2012) Claudio Hetz   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Postembryonic neuronal addition in Zebrafish dorsal root ganglia is regulated by Notch signaling

(2012) Hillary McGraw et al.   Neural Development

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Metagenomic sequencing of the human gut microbiome before and after bariatric surgery in obese patients with type 2 diabetes: correlation with inflammatory and metabolic parameters

(2012) J Graessler et al.   PHARMACOGENOMICS JOURNAL

Spatial organization of the extracellular matrix regulates cell-cell junction positioning

(2012) Q. Tseng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Crypt-Specific Core Microbiota Resides in the Mouse Colon

(2012) T. Pedron et al.   mBio

Diet: Friend or Foe of Enteroendocrine Cells: How It Interacts with Enteroendocrine Cells

(2012) Sofia Moran-Ramos et al.   Advances in Nutrition

Trends in carbohydrate, fat, and protein intakes and association with energy intake in normal-weight, overweight, and obese individuals: 1971–2006

(2011) Gregory L Austin et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Toll-like receptors in bony fish: From genomics to function

(2011) Yniv Palti   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Visualizing digestive organ morphology and function using differential fatty acid metabolism in live zebrafish

(2011) Juliana Debrito Carten et al.   DEVELOPMENTAL BIOLOGY

Na+-D-glucose Cotransporter SGLT1 is Pivotal for Intestinal Glucose Absorption and Glucose-Dependent Incretin Secretion

(2011) V. Gorboulev et al.   DIABETES

Basic helix-loop-helix transcription factors and enteroendocrine cell differentiation

(2011) H. J. Li et al.   DIABETES OBESITY & METABOLISM

Microbial Colonization Induces Dynamic Temporal and Spatial Patterns of NF-κB Activation in the Zebrafish Digestive Tract

(2011) Michelle Kanther et al.   GASTROENTEROLOGY

Zebrafish obesogenic test: a tool for screening molecules that target adiposity

(2011) Angèle Tingaud-Sequeira et al.   JOURNAL OF LIPID RESEARCH

Free Fatty Acid Receptors FFAR1 and GPR120 as Novel Therapeutic Targets for Metabolic Disorders

(2011) Takafumi Hara et al.   JOURNAL OF PHARMACEUTICAL SCIENCES

Egg yolk fatty acid profile in relation to dietary fatty acid concentrations

(2011) Reza Poureslami et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Acinetobacter baumannii Secretes Cytotoxic Outer Membrane Protein A via Outer Membrane Vesicles

(2011) Jong Sook Jin et al.   PLoS One

Enteroendocrine cells: a site of ‘taste’ in gastrointestinal chemosensing

(2011) Catia Sternini et al.   Current Opinion in Endocrinology Diabetes and Obesity

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Morphological and molecular evidence for functional organization along the rostrocaudal axis of the adult zebrafish intestine

(2010) Zhengyuan Wang et al.   BMC GENOMICS

Germ-free C57BL/6J mice are resistant to high-fat-diet-induced insulin resistance and have altered cholesterol metabolism

(2010) Sylvie Rabot et al.   FASEB JOURNAL

Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models

(2010) E F Murphy et al.   GUT

High-carbohydrate, High-fat Diet–induced Metabolic Syndrome and Cardiovascular Remodeling in Rats

(2010) Sunil K. Panchal et al.   JOURNAL OF CARDIOVASCULAR PHARMACOLOGY

Nitric Oxide Synthase Regulates Morphogenesis of Zebrafish Spinal Cord Motoneurons

(2010) S. Bradley et al.   JOURNAL OF NEUROSCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Dissection of Host Cell Signal Transduction during Acinetobacter baumannii – Triggered Inflammatory Response

(2010) Catalina March et al.   PLoS One

Role of MGAT2 and DGAT1 in the release of gut peptides after triglyceride ingestion

(2009) Mayumi Okawa et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A Novel Conus Snail Polypeptide Causes Excitotoxicity by Blocking Desensitization of AMPA Receptors

(2009) Craig S. Walker et al.   CURRENT BIOLOGY

GPR119 Is Essential for Oleoylethanolamide-Induced Glucagon-Like Peptide-1 Secretion From the Intestinal Enteroendocrine L-Cell

(2009) L. M. Lauffer et al.   DIABETES

Generation of living color transgenic zebrafish to trace somatostatin-expressing cells and endocrine pancreas organization

(2009) Zhen Li et al.   DIFFERENTIATION

Coingestion of Acylglycerols Differentially Affects Glucose-Induced Insulin Secretion via Glucose-Dependent Insulinotropic Polypeptide in C57BL/6J Mice

(2009) Akira Shimotoyodome et al.   ENDOCRINOLOGY

Glucagon-Like Peptide-2 Increases Intestinal Lipid Absorption and Chylomicron Production via CD36

(2009) Joanne Hsieh et al.   GASTROENTEROLOGY

High-Fat Diet Determines the Composition of the Murine Gut Microbiome Independently of Obesity

(2009) Marie A. Hildebrandt et al.   GASTROENTEROLOGY

Protein kinase-A affects sorting and conformation of the sodium-dependent glucose co-transporter SGLT1

(2009) Supriya Subramanian et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Notch-responsive cells initiate the secondary transition in larval zebrafish pancreas

(2009) Michael J. Parsons et al.   MECHANISMS OF DEVELOPMENT

APP binds DR6 to trigger axon pruning and neuron death via distinct caspases

(2009) Anatoly Nikolaev et al.   NATURE

synaptojanin1 Is Required for Temporal Fidelity of Synaptic Transmission in Hair Cells

(2009) Josef G. Trapani et al.   PLoS Genetics

Diet-Induced Obesity Is Linked to Marked but Reversible Alterations in the Mouse Distal Gut Microbiome

(2008) Peter J. Turnbaugh et al.   Cell Host & Microbe

Glucose Sensing in L Cells: A Primary Cell Study

(2008) Frank Reimann et al.   Cell Metabolism

Gpr40 Is Expressed in Enteroendocrine Cells and Mediates Free Fatty Acid Stimulation of Incretin Secretion

(2008) S. Edfalk et al.   DIABETES

Investigation of Structure-Activity Relationships of Oxyntomodulin (Oxm) Using Oxm Analogs

(2008) Maralyn R. Druce et al.   ENDOCRINOLOGY

Lifeact: a versatile marker to visualize F-actin

(2008) Julia Riedl et al.   NATURE METHODS

Methods for generating and colonizing gnotobiotic zebrafish

(2008) Linh N Pham et al.   Nature Protocols