Prospects for achieving durable disease resistance with elite fruit quality in apple breeding

Validation of SNP markers for fruit quality and disease resistance loci in apple (Malus × domestica Borkh.) using the OpenArray® platform

(2019) David Chagné et al.   Horticulture Research

Novel metrics to classify fire blight resistance of 94 apple cultivars

(2019) S. A. Kostick et al.   PLANT PATHOLOGY

Elucidating the genetic background of the early-flowering transgenic genetic stock T1190 with a high-density SNP array

(2019) Feixiong Luo et al.   MOLECULAR BREEDING

Apple whole genome sequences: recent advances and new prospects

(2019) Cameron P. Peace et al.   Horticulture Research

Prunus genetics and applications after de novo genome sequencing: achievements and prospects

(2019) Maria José Aranzana et al.   Horticulture Research

High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow

(2019) Stijn Vanderzande et al.   PLoS One

Generation of advanced fire blight-resistant apple (Malus × domestica) selections of the fifth generation within 7 years of applying the early flowering approach

(2018) Ina Schlathölter et al.   PLANTA

An integrated approach for increasing breeding efficiency in apple and peach in Europe

(2018) Francois Laurens et al.   Horticulture Research

Fire blight resistance of Malus ×arnoldiana is controlled by a quantitative trait locus located at the distal end of linkage group 12

(2017) Ofere Francis Emeriewen et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Epistatic fire blight resistance QTL alleles in the apple cultivar ‘Enterprise’ and selection X-6398 discovered and characterized through pedigree-informed analysis

(2017) Eric van de Weg et al.   MOLECULAR BREEDING

Navigating complexity to breed disease-resistant crops

(2017) Rebecca Nelson et al.   NATURE REVIEWS GENETICS

Marker-Assisted Development and Evaluation of Near-Isogenic Lines for Broad-Spectrum Powdery Mildew Resistance Gene Pm2b Introgressed into Different Genetic Backgrounds of Wheat

(2017) Hongxing Xu et al.   Frontiers in Plant Science

Elucidation of the ‘Honeycrisp’ pedigree through haplotype analysis with a multi-family integrated SNP linkage map and a large apple (Malus×domestica) pedigree-connected SNP data set

(2017) Nicholas P Howard et al.   Horticulture Research

An experimental validation of genomic selection in octoploid strawberry

(2017) Salvador A Gezan et al.   Horticulture Research

Genotyping-by-sequencing markers facilitate the identification of quantitative trait loci controlling resistance to Penicillium expansum in Malus sieversii

(2017) John L. Norelli et al.   PLoS One

Advances and Challenges in Genomic Selection for Disease Resistance

(2016) Jesse Poland et al.   Annual Review of Phytopathology

Consumers' behaviors and concerns on fresh vegetable purchase and safety in Beijing urban areas, China

(2016) Li Cheng et al.   FOOD CONTROL

Efficiency of genomic selection for tomato fruit quality

(2016) Janejira Duangjit et al.   MOLECULAR BREEDING

PediHaplotyper: software for consistent assignment of marker haplotypes in pedigrees

(2016) Roeland E. Voorrips et al.   MOLECULAR BREEDING

Development and validation of the Axiom®Apple480K SNP genotyping array

(2016) Luca Bianco et al.   PLANT JOURNAL

Efficiency of pyramiding of three quantitative resistance loci to apple scab

(2016) G. Laloi et al.   PLANT PATHOLOGY

Marker-assisted introgression (MAI) of almond genes into the peach background: a fast method to mine and integrate novel variation from exotic sources in long intergeneration species

(2016) Octávio Serra et al.   Tree Genetics & Genomes

Development of SNP-based assays for disease resistance and fruit quality traits in apple (Malus × domestica Borkh.) and validation in breeding pilot studies

(2016) Isabelle O. Baumgartner et al.   Tree Genetics & Genomes

Modeling of genetic gain for single traits from marker-assisted seedling selection in clonally propagated crops

(2016) Sushan Ru et al.   Horticulture Research

A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species

(2016) Erica A Di Pierro et al.   Horticulture Research

Identification of SNPs linked to eight apple disease resistance loci

(2015) Melanie Jänsch et al.   MOLECULAR BREEDING

Scab resistance in ‘Geneva’ apple is conditioned by a resistance gene cluster with complex genetic control

(2015) Héloïse Bastiaanse et al.   MOLECULAR PLANT PATHOLOGY

Virulence Characterization ofVenturia inaequalisReference Isolates on the Differential Set ofMalusHosts

(2015) Valérie Caffier et al.   PLANT DISEASE

Breeding Elite Lines of Apple Carrying Pyramided Homozygous Resistance Genes Against Apple Scab and Resistance Against Powdery Mildew and Fire Blight

(2015) Isabelle O. Baumgartner et al.   PLANT MOLECULAR BIOLOGY REPORTER

Accuracy and responses of genomic selection on key traits in apple breeding

(2015) Hélène Muranty et al.   Horticulture Research

Durable resistance: A key to sustainable management of pathogens and pests

(2014) Christopher C. Mundt   INFECTION GENETICS AND EVOLUTION

Fine-mapping of the apple scab resistance locus Rvi12 (Vb) derived from ‘Hansen’s baccata #2’

(2014) S. Padmarasu et al.   MOLECULAR BREEDING

Fine mapping of the gene Rvi18 (V25) for broad-spectrum resistance to apple scab, and development of a linked SSR marker suitable for marker-assisted breeding

(2014) Jose Miguel Soriano et al.   MOLECULAR BREEDING

Identification of a major quantitative trait locus for resistance to fire blight in the wild apple species Malus fusca

(2014) Ofere Emeriewen et al.   MOLECULAR BREEDING

Xanthomonas arboricolaDiseases of Stone Fruit, Almond, and Walnut Trees: Progress Toward Understanding and Management

(2014) Jay Ram Lamichhane   PLANT DISEASE

Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

(2014) Luca Bianco et al.   PLoS One

A strategy for developing representative germplasm sets for systematic QTL validation, demonstrated for apple, peach, and sweet cherry

(2014) C. P. Peace et al.   Tree Genetics & Genomes

A consensus ‘Honeycrisp’ apple (Malus × domestica) genetic linkage map from three full-sib progeny populations

(2014) Matthew D. Clark et al.   Tree Genetics & Genomes

Achieving sustainable plant disease management through evolutionary principles

(2014) Jiasui Zhan et al.   TRENDS IN PLANT SCIENCE

Genomic selection: genome-wide prediction in plant improvement

(2014) Zeratsion Abera Desta et al.   TRENDS IN PLANT SCIENCE

Genomic selection in crops, trees and forages: a review

(2014) Z. Lin et al.   Crop & Pasture Science

Breeding better cultivars, faster: applications of new technologies for the rapid deployment of superior horticultural tree crops

(2014) Steve van Nocker et al.   Horticulture Research

Genomewide Selection to Introgress Semidwarf Maize Germplasm into U.S. Corn Belt Inbreds

(2013) Emily Combs et al.   CROP SCIENCE

Identification of genetic loci associated with fire blight resistance inMalusthrough combined use of QTL and association mapping

(2013) M. Awais Khan et al.   PHYSIOLOGIA PLANTARUM

Reduced generation time of apple seedlings to within a year by means of a plant virus vector: a new plant-breeding technique with no transmission of genetic modification to the next generation

(2013) Noriko Yamagishi et al.   PLANT BIOTECHNOLOGY JOURNAL

Identification of Pyrus Single Nucleotide Polymorphisms (SNPs) and Evaluation for Genetic Mapping in European Pear and Interspecific Pyrus Hybrids

(2013) Sara Montanari et al.   PLoS One

Linkage Relationships Among Multiple QTL for Horticultural Traits and Late Blight ( P. infestans ) Resistance on Chromosome 5 Introgressed from Wild Tomato Solanum habrochaites

(2013) J. Erron Haggard et al.   G3-Genes Genomes Genetics

Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array

(2012) Laima Antanaviciute et al.   BMC GENOMICS

Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple

(2012) David Chagné et al.   PLoS One

Genomic Selection for Fruit Quality Traits in Apple (Malus×domestica Borkh.)

(2012) Satish Kumar et al.   PLoS One

A genetic linkage map of an apple rootstock progeny anchored to the Malus genome sequence

(2012) F. Fernández-Fernández et al.   Tree Genetics & Genomes

Catch me if you can: bacterial effectors and plant targets

(2012) Laurent Deslandes et al.   TRENDS IN PLANT SCIENCE

Revision of the Nomenclature of the Differential Host-Pathogen Interactions of Venturia inaequalis and Malus

(2011) Vincent G.M. Bus et al.   Annual Review of Phytopathology

Use of a transgenic early flowering approach in apple (Malus × domestica Borkh.) to introgress fire blight resistance from cultivar Evereste

(2011) Pierre-Marie Le Roux et al.   MOLECULAR BREEDING

Application of a high-speed breeding technology to apple (Malus × domestica) based on transgenic early flowering plants and marker-assisted selection

(2011) Henryk Flachowsky et al.   NEW PHYTOLOGIST

Identification of wild apple germplasm (Malus spp.) accessions with resistance to the postharvest decay pathogens Penicillium expansum and Colletotrichum acutatum

(2011) Wayne M. Jurick et al.   PLANT BREEDING

Towards genomic selection in apple (Malus × domestica Borkh.) breeding programmes: Prospects, challenges and strategies

(2011) Satish Kumar et al.   Tree Genetics & Genomes

Vf scab resistance of Malus

(2011) Cesare Gessler et al.   TREES-STRUCTURE AND FUNCTION

Mapping of quantitative trait loci for fire blight resistance in the apple cultivars ‘Florina’ and ‘Nova Easygro’

(2010) P.-M. F. Le Roux et al.   GENOME

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

Promotion of flowering and reduction of a generation time in apple seedlings by ectopical expression of the Arabidopsis thaliana FT gene using the Apple latent spherical virus vector

(2010) Noriko Yamagishi et al.   PLANT MOLECULAR BIOLOGY

A major resistance gene from Russian apple ‘Antonovka’ conferring field immunity against apple scab is closely linked to the Vf locus

(2010) F. Dunemann et al.   Tree Genetics & Genomes

Genome mapping of an apple scab, a powdery mildew and a woolly apple aphid resistance gene from open-pollinated Mildew Immune Selection

(2010) Vincent G. M. Bus et al.   Tree Genetics & Genomes

Two distinct major QTL for resistance to fire blight co-localize on linkage group 12 in apple genotypes ‘Evereste’ and Malus floribunda clone 821

(2009) C.-E. Durel et al.   GENOME

Quantitative resistance increases the durability of qualitative resistance to Leptosphaeria maculans in Brassica napus

(2009) Hortense Brun et al.   NEW PHYTOLOGIST

Identification and mapping of the novel apple scab resistance gene Vd3

(2009) J.M. Soriano et al.   Tree Genetics & Genomes

The Pillnitz Re-Series of Apple Cultivars – Do They Hold Promise? – 80 Years of Professional German Fruit Breeding 2008

(2008) Manfred Fischer et al.   Erwerbs-Obstbau

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

From Guard to Decoy: A New Model for Perception of Plant Pathogen Effectors

(2008) R. A.L. van der Hoorn et al.   PLANT CELL

Isolation of Streptomycin-Resistant Isolates ofErwinia amylovorain New York

(2008) Nicole L. Russo et al.   PLANT DISEASE

Shades of gray: the world of quantitative disease resistance

(2008) Jesse A. Poland et al.   TRENDS IN PLANT SCIENCE