A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species

Genomics of pear and other Rosaceae fruit trees

(2016) Toshiya Yamamoto et al.   BREEDING SCIENCE

Detecting QTLs and putative candidate genes involved in budbreak and flowering time in an apple multiparental population

(2016) Alix Allard et al.   JOURNAL OF EXPERIMENTAL BOTANY

Development and validation of the Axiom®Apple480K SNP genotyping array

(2016) Luca Bianco et al.   PLANT JOURNAL

Genomics-based strategies for the use of natural variation in the improvement of crop metabolism

(2016) Federico Scossa et al.   PLANT SCIENCE

FaRXf1: a locus conferring resistance to angular leaf spot caused by Xanthomonas fragariae in octoploid strawberry

(2016) Jack A. Roach et al.   THEORETICAL AND APPLIED GENETICS

QTL mapping and breeding value estimation through pedigree-based analysis of fruit size and weight in four diverse peach breeding programs

(2016) Jonathan Fresnedo-Ramírez et al.   Tree Genetics & Genomes

QTL analysis of soft scald in two apple populations

(2016) Kendra A McClure et al.   Horticulture Research

A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

(2015) Rui Sun et al.   BMC GENOMICS

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa

(2015) Nahla V Bassil et al.   BMC GENOMICS

A major QTL controlling apple skin russeting maps on the linkage group 12 of ‘Renetta Grigia di Torriana’

(2015) Luigi Falginella et al.   BMC PLANT BIOLOGY

QTL mapping of pomological traits in peach and related species breeding germplasm

(2015) Jonathan Fresnedo-Ramírez et al.   MOLECULAR BREEDING

MAGIC populations in crops: current status and future prospects

(2015) B. Emma Huang et al.   THEORETICAL AND APPLIED GENETICS

Construction of a high density linkage map and its application in the identification of QTLs for soluble sugar and organic acid components in apple

(2015) Baiquan Ma et al.   Tree Genetics & Genomes

Second-Generation Linkage Maps for the Pacific Oyster Crassostrea gigas Reveal Errors in Assembly of Genome Scaffolds

(2015) Dennis Hedgecock et al.   G3-Genes Genomes Genetics

Accuracy and responses of genomic selection on key traits in apple breeding

(2015) Hélène Muranty et al.   Horticulture Research

Fine mapping of the gene Rvi18 (V25) for broad-spectrum resistance to apple scab, and development of a linked SSR marker suitable for marker-assisted breeding

(2014) Jose Miguel Soriano et al.   MOLECULAR BREEDING

Ultra-dense genetic map of durum wheat × wild emmer wheat developed using the 90K iSelect SNP genotyping assay

(2014) Raz Avni et al.   MOLECULAR BREEDING

High-resolution genetic maps ofEucalyptusimproveEucalyptus grandisgenome assembly

(2014) Jérôme Bartholomé et al.   NEW PHYTOLOGIST

A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding

(2014) Marco Maccaferri et al.   PLANT BIOTECHNOLOGY JOURNAL

Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

(2014) Luca Bianco et al.   PLoS One

A consensus ‘Honeycrisp’ apple (Malus × domestica) genetic linkage map from three full-sib progeny populations

(2014) Matthew D. Clark et al.   Tree Genetics & Genomes

Fast and Cost-Effective Genetic Mapping in Apple Using Next-Generation Sequencing

(2014) K. M. Gardner et al.   G3-Genes Genomes Genetics

Fruit size QTL identification and the prediction of parental QTL genotypes and breeding values in multiple pedigreed populations of sweet cherry

(2013) Umesh R. Rosyara et al.   MOLECULAR BREEDING

Advances in QTL mapping for ethylene production in apple (Malus×domestica Borkh.)

(2013) Fabrizio Costa et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

‘Schmidt's Antonovka’ is identical to ‘Common Antonovka’, an apple cultivar widely used in Russia in breeding for biotic and abiotic stresses

(2013) Anna Pikunova et al.   Tree Genetics & Genomes

Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array

(2012) Laima Antanaviciute et al.   BMC GENOMICS

Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple

(2012) David Chagné et al.   PLoS One

A Multi-Population Consensus Genetic Map Reveals Inconsistent Marker Order among Maps Likely Attributed to Structural Variations in the Apple Genome

(2012) Muhammad Awais Khan et al.   PLoS One

Two-Phase Analysis in Consensus Genetic Mapping

(2012) Y. Ronin et al.   G3-Genes Genomes Genetics

Multipoint maximum likelihood mapping in a full-sib family of an outbreeding species

(2011) J. W. VAN OOIJEN   Genetics Research

Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome

(2011) Yuepeng Han et al.   JOURNAL OF EXPERIMENTAL BOTANY

Diversity arrays technology (DArT) markers in apple for genetic linkage maps

(2011) Henk J. Schouten et al.   MOLECULAR BREEDING

Analysis of natural allelic variation in Arabidopsis using a multiparent recombinant inbred line population

(2011) X. Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accurate Construction of Consensus Genetic Maps via Integer Linear Programming

(2010) Yonghui Wu et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

QTL dynamics for fruit firmness and softening around an ethylene-dependent polygalacturonase gene in apple (Malusxdomestica Borkh.)

(2010) F. Costa et al.   JOURNAL OF EXPERIMENTAL BOTANY

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

QTL mapping of aroma compounds analysed by headspace solid-phase microextraction gas chromatography in the apple progeny ‘Discovery’ × ‘Prima’

(2009) F. Dunemann et al.   MOLECULAR BREEDING

Identification and mapping of the novel apple scab resistance gene Vd3

(2009) J.M. Soriano et al.   Tree Genetics & Genomes

Estimation of genetic parameters and prediction of breeding values for apple fruit-quality traits using pedigreed plant material in Europe

(2009) Abou Bakari Kouassi et al.   Tree Genetics & Genomes

The development of a bin mapping population and the selective mapping of 103 markers in the diploid Fragaria reference map

(2008) D. J. Sargent et al.   GENOME

Bin mapping of genomic and EST-derived SSRs in melon (Cucumis melo L.)

(2008) I. Fernandez-Silva et al.   THEORETICAL AND APPLIED GENETICS

Construction of an integrated consensus map of the apple genome based on four mapping populations

(2008) A. N’Diaye et al.   Tree Genetics & Genomes

Identification and stability of QTLs for fruit quality traits in apple

(2008) Katrien Kenis et al.   Tree Genetics & Genomes

Construction of a dense genetic linkage map for apple rootstocks using SSRs developed from Malus ESTs and Pyrus genomic sequences

(2008) J.-M. Celton et al.   Tree Genetics & Genomes

Development and test of 21 multiplex PCRs composed of SSRs spanning most of the apple genome

(2008) A. Patocchi et al.   Tree Genetics & Genomes