Regulation of the Ysh1 endonuclease of the mRNA cleavage/polyadenylation complex by ubiquitin-mediated degradation

Tissue-specific mechanisms of alternative polyadenylation: Testis, brain, and beyond (2018 update)

(2019) Clinton C. MacDonald   Wiley Interdisciplinary Reviews-RNA

Ipa1 Is an RNA Polymerase II Elongation Factor that Facilitates Termination by Maintaining Levels of the Poly(A) Site Endonuclease Ysh1

(2019) Erika L. Pearson et al.   Cell Reports

Activation of the Endonuclease that Defines mRNA 3′ Ends Requires Incorporation into an 8-Subunit Core Cleavage and Polyadenylation Factor Complex

(2019) Chris H. Hill et al.   MOLECULAR CELL

Selective Roles of Vertebrate PCF11 in Premature and Full-Length Transcript Termination

(2019) Kinga Kamieniarz-Gdula et al.   MOLECULAR CELL

Alternative polyadenylation and the stress response

(2019) Jason Sadek et al.   Wiley Interdisciplinary Reviews-RNA

Alternative cleavage and polyadenylation in health and disease

(2019) Andreas J. Gruber et al.   NATURE REVIEWS GENETICS

The Hsp70 chaperone network

(2019) Rina Rosenzweig et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Mechanistic insights into mRNA 3′-end processing

(2019) Ananthanarayanan Kumar et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Estimates of genomic heritability and genome-wide association study for fatty acids profile in Santa Inês sheep

(2018) G. A. Rovadoscki et al.   BMC GENOMICS

The TORC1-Regulated CPA Complex Rewires an RNA Processing Network to Drive Autophagy and Metabolic Reprogramming

(2018) Hong-Wen Tang et al.   Cell Metabolism

Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity

(2018) Joshua D. Eaton et al.   GENES & DEVELOPMENT

Proteasome Activity Is Influenced by the HECT_2 Protein Ipa1 in Budding Yeast

(2018) Anne P. Lutz et al.   GENETICS

3′ UTR lengthening as a novel mechanism in regulating cellular senescence

(2018) Meng Chen et al.   GENOME RESEARCH

3′ UTR shortening represses tumor-suppressor genes in trans by disrupting ceRNA crosstalk

(2018) Hyun Jung Park et al.   NATURE GENETICS

Structural basis for membrane anchoring and fusion regulation of the herpes simplex virus fusogen gB

(2018) Rebecca S. Cooper et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Cellular stress alters 3′UTR landscape through alternative polyadenylation and isoform-specific degradation

(2018) Dinghai Zheng et al.   Nature Communications

Structural basis for membrane anchoring and fusion regulation of the herpes simplex virus fusogen gB

(2018) Rebecca S. Cooper et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Proteasome Activity Is Influenced by the HECT_2 Protein Ipa1 in Budding Yeast

(2018) Anne P. Lutz et al.   GENETICS

Genome-wide Analysis of RNA Polymerase II Termination at Protein-Coding Genes

(2017) Carlo Baejen et al.   MOLECULAR CELL

Architecture of the human interactome defines protein communities and disease networks

(2017) Edward L. Huttlin et al.   NATURE

hnRNP L controls HPV16 RNA polyadenylation and splicing in an Akt kinase-dependent manner

(2017) Naoko Kajitani et al.   NUCLEIC ACIDS RESEARCH

Noncanonical Alternative Polyadenylation Contributes to Gene Regulation in Response to Hypoxia

(2017) Laura de Lorenzo et al.   PLANT CELL

Cleavage and polyadenylation: Ending the message expands gene regulation

(2017) Jonathan Neve et al.   RNA Biology

Architecture of eukaryotic mRNA 3′-end processing machinery

(2017) Ana Casañal et al.   SCIENCE

The role of alternative polyadenylation in the antiviral innate immune response

(2017) Xin Jia et al.   Nature Communications

Ubiquitination of stalled ribosome triggers ribosome-associated quality control

(2017) Yoshitaka Matsuo et al.   Nature Communications

Genome-wide association study of biologically informed periodontal complex traits offers novel insights into the genetic basis of periodontal disease

(2016) Steven Offenbacher et al.   HUMAN MOLECULAR GENETICS

The increasing complexity of the ubiquitin code

(2016) Richard Yau et al.   NATURE CELL BIOLOGY

Alternative polyadenylation of mRNA precursors

(2016) Bin Tian et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Herpes simplex virus ICP27 regulates alternative pre-mRNA polyadenylation and splicing in a sequence-dependent manner

(2016) Shuang Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Widespread Shortening of 3’ Untranslated Regions and Increased Exon Inclusion Are Evolutionarily Conserved Features of Innate Immune Responses to Infection

(2016) Athma A. Pai et al.   PLoS Genetics

A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances

(2015) Marco Y. Hein et al.   CELL

The end of the message: multiple protein–RNA interactions define the mRNA polyadenylation site

(2015) Yongsheng Shi et al.   GENES & DEVELOPMENT

Whole-exome sequencing implicates UBE3D in age-related macular degeneration in East Asian populations

(2015) Lv-Zhen Huang et al.   Nature Communications

RBBP6 isoforms regulate the human polyadenylation machinery and modulate expression of mRNAs with AU-rich 3′ UTRs

(2014) Dafne Campigli Di Giammartino et al.   GENES & DEVELOPMENT

Delineating the Structural Blueprint of the Pre-mRNA 3'-End Processing Machinery

(2014) K. Xiang et al.   MOLECULAR AND CELLULAR BIOLOGY

Efficient mRNA Polyadenylation Requires a Ubiquitin-Like Domain, a Zinc Knuckle, and a RING Finger Domain, All Contained in the Mpe1 Protein

(2014) S. D. Lee et al.   MOLECULAR AND CELLULAR BIOLOGY

Genome-Wide Mapping of Yeast RNA Polymerase II Termination

(2014) Paul Schaughency et al.   PLoS Genetics

RING-type E3 ligases: Master manipulators of E2 ubiquitin-conjugating enzymes and ubiquitination

(2013) Meredith B. Metzger et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

DNA damage induces targeted, genome-wide variation of poly(A) sites in budding yeast

(2013) J. H. Graber et al.   GENOME RESEARCH

Alternative cleavage and polyadenylation: extent, regulation and function

(2013) Ran Elkon et al.   NATURE REVIEWS GENETICS

Alterations in Polyadenylation and Its Implications for Endocrine Disease

(2013) Anders Rehfeld et al.   Frontiers in Endocrinology

The Ubiquitin System, an Immense Realm

(2012) Alexander Varshavsky   Annual Review of Biochemistry

The Ubiquitin-Proteasome System of Saccharomyces cerevisiae

(2012) D. Finley et al.   GENETICS

Novel E3 Ubiquitin Ligases That Regulate Histone Protein Levels in the Budding Yeast Saccharomyces cerevisiae

(2012) Rakesh Kumar Singh et al.   PLoS One

Solution Structure of RING Finger-like Domain of Retinoblastoma-binding Protein-6 (RBBP6) Suggests It Functions as a U-box

(2011) Mautin A. Kappo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Nucleoid occlusion factor SlmA is a DNA-activated FtsZ polymerization antagonist

(2011) Hongbaek Cho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Daughter cell separation is controlled by cytokinetic ring-activated cell wall hydrolysis

(2010) Tsuyoshi Uehara et al.   EMBO JOURNAL

Noncanonical transcript forms in yeast and their regulation during environmental stress

(2010) O. K. Yoon et al.   RNA

The Essential N Terminus of the Pta1 Scaffold Protein Is Required for snoRNA Transcription Termination and Ssu72 Function but Is Dispensable for Pre-mRNA 3'-End Processing

(2009) M. A. Ghazy et al.   MOLECULAR AND CELLULAR BIOLOGY

RBBP6 Interacts with Multifunctional Protein YB-1 through Its RING Finger Domain, Leading to Ubiquitination and Proteosomal Degradation of YB-1

(2008) Moredreck Chibi et al.   JOURNAL OF MOLECULAR BIOLOGY

Unphosphorylated SR-Like Protein Npl3 Stimulates RNA Polymerase II Elongation

(2008) Jessica L. Dermody et al.   PLoS One