The impact of food additives, artificial sweeteners and domestic hygiene products on the human gut microbiome and its fibre fermentation capacity

Inflammatory Bowel Diseases and Food Additives: To Add Fuel on the Flames!

(2019) Rachel Marion-Letellier et al.   Nutrients

The reduction of faecal calprotectin during exclusive enteral nutrition is lost rapidly after food re-introduction

(2019) Michael Logan et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Intakes and Food Sources of Dietary Fibre and Their Associations with Measures of Body Composition and Inflammation in UK Adults: Cross-Sectional Analysis of the Airwave Health Monitoring Study

(2019) Rachel Gibson et al.   Nutrients

Evolving role of diet in the pathogenesis and treatment of inflammatory bowel diseases

(2018) Arie Levine et al.   GUT

The Artificial Sweetener Splenda Promotes Gut Proteobacteria, Dysbiosis, and Myeloperoxidase Reactivity in Crohn’s Disease–Like Ileitis

(2018) Alexander Rodriguez-Palacios et al.   INFLAMMATORY BOWEL DISEASES

The Pharmabiotic Approach to Treat Hyperammonemia

(2018) Jing Liu et al.   Nutrients

The Western Diet–Microbiome-Host Interaction and Its Role in Metabolic Disease

(2018) Marit Zinöcker et al.   Nutrients

Treatment of Active Crohn’s Disease With an Ordinary Food-based Diet That Replicates Exclusive Enteral Nutrition

(2018) V. Svolos et al.   GASTROENTEROLOGY

Dietary emulsifiers directly alter human microbiota composition and gene expression ex vivo potentiating intestinal inflammation

(2017) Benoit Chassaing et al.   GUT

Household availability of ultra-processed foods and obesity in nineteen European countries

(2017) Carlos Augusto Monteiro et al.   PUBLIC HEALTH NUTRITION

Dietary exposure to emulsifiers and detergents and the prevalence of cardiovascular disease

(2017) J M Rhodes   QJM-AN INTERNATIONAL JOURNAL OF MEDICINE

Carrageenan-induced colitis is associated with decreased population of anti-inflammatory bacterium, Akkermansia muciniphila , in the gut microbiota of C57BL/6J mice

(2017) Qingsen Shang et al.   TOXICOLOGY LETTERS

Sulfites inhibit the growth of four species of beneficial gut bacteria at concentrations regarded as safe for food

(2017) Sally V. Irwin et al.   PLoS One

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Bifidobacteria and Their Role as Members of the Human Gut Microbiota

(2016) Amy O'Callaghan et al.   Frontiers in Microbiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Extensive Modulation of the Fecal Metagenome in Children With Crohn’s Disease During Exclusive Enteral Nutrition

(2015) Christopher Quince et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

High-level adherence to a Mediterranean diet beneficially impacts the gut microbiota and associated metabolome

(2015) Francesca De Filippis et al.   GUT

Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome

(2015) Benoit Chassaing et al.   NATURE

Comparative Analysis of Intestinal Tract Models

(2015) C.F. Williams et al.   Annual Review of Food Science and Technology

Decline in Presumptively Protective Gut Bacterial Species and Metabolites Are Paradoxically Associated with Disease Improvement in Pediatric Crohn’s Disease During Enteral Nutrition

(2014) Konstantinos Gerasimidis et al.   INFLAMMATORY BOWEL DISEASES

Evidence for the Gut Microbiota Short-Chain Fatty Acids as Key Pathophysiological Molecules Improving Diabetes

(2014) Alessandra Puddu et al.   MEDIATORS OF INFLAMMATION

A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes

(2014) Johan Larsbrink et al.   NATURE

Artificial sweeteners induce glucose intolerance by altering the gut microbiota

(2014) Jotham Suez et al.   NATURE

The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism

(2013) Gijs den Besten et al.   JOURNAL OF LIPID RESEARCH

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

(2013) Abdessamad El Kaoutari et al.   NATURE REVIEWS MICROBIOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10 −/− mice

(2012) Suzanne Devkota et al.   NATURE

Microbial pathways in colonic sulfur metabolism and links with health and disease

(2012) Franck Carbonero et al.   Frontiers in Physiology

The current trends and future perspectives of prebiotics research: a review

(2012) Seema Patel et al.   3 Biotech

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Carbohydrate metabolism in Bifidobacteria

(2011) Karina Pokusaeva et al.   Genes and Nutrition

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Potential beneficial effects of butyrate in intestinal and extraintestinal diseases

(2011) Roberto Berni Canani   WORLD JOURNAL OF GASTROENTEROLOGY

Serial Fecal Calprotectin Changes in Children With Crohnʼs Disease on Treatment With Exclusive Enteral Nutrition

(2010) Konstantinos Gerasimidis et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Splenda Alters Gut Microflora and Increases Intestinal P-Glycoprotein and Cytochrome P-450 in Male Rats

(2008) Mohamed B. Abou-Donia et al.   JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES