Autophagy mediates temporary reprogramming and dedifferentiation in plant somatic cells

SQSTM1/p62-Directed Metabolic Reprogramming Is Essential for Normal Neurodifferentiation

(2019) Javier Calvo-Garrido et al.   Stem Cell Reports

The multiple mechanisms that regulate p53 activity and cell fate

(2019) Antonina Hafner et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Autophagy in stem cells: repair, remodelling and metabolic reprogramming

(2018) Patricia Boya et al.   DEVELOPMENT

Mechanism and medical implications of mammalian autophagy

(2018) Ivan Dikic et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Dynamics and function of DNA methylation in plants

(2018) Huiming Zhang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

iPSCs: A Comparison between Animals and Plants

(2018) Ya Lin Sang et al.   TRENDS IN PLANT SCIENCE

The mechanistic basis for chromatin regulation by pioneer transcription factors

(2018) Makiko Iwafuchi-Doi   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

Strong phenotypic plasticity limits potential for evolutionary responses to climate change

(2018) Vicencio Oostra et al.   Nature Communications

DNA damage as a consequence of NLR activation

(2018) Eleazar Rodriguez et al.   PLoS Genetics

Interplay between YAP/TAZ and Metabolism

(2018) Ja Hyun Koo et al.   Cell Metabolism

Disruption of the beclin 1–BCL2 autophagy regulatory complex promotes longevity in mice

(2018) Álvaro F. Fernández et al.   NATURE

Autophagy and the cell biology of age-related disease

(2018) Andrew M. Leidal et al.   NATURE CELL BIOLOGY

Linking cellular stress responses to systemic homeostasis

(2018) Lorenzo Galluzzi et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Autophagy maintains the metabolism and function of young and old stem cells

(2017) Theodore T. Ho et al.   NATURE

Microenvironmental autophagy promotes tumour growth

(2017) Nadja S. Katheder et al.   NATURE

Global translational reprogramming is a fundamental layer of immune regulation in plants

(2017) Guoyong Xu et al.   NATURE

Ground rules of the pluripotency gene regulatory network

(2017) Mo Li et al.   NATURE REVIEWS GENETICS

Transcriptional reprogramming in cellular quiescence

(2017) Benjamin Roche et al.   RNA Biology

Hormetic heat stress and HSF-1 induce autophagy to improve survival and proteostasis in C. elegans

(2017) Caroline Kumsta et al.   Nature Communications

In situ click chemistry generation of cyclooxygenase-2 inhibitors

(2017) Atul Bhardwaj et al.   Nature Communications

Autophagy regulates cytoplasmic remodeling during cell reprogramming in a zebrafish model of muscle regeneration

(2016) Alfonso Saera-Vila et al.   Autophagy

A Pivotal Role of DELLAs in Regulating Multiple Hormone Signals

(2016) Jean-Michel Davière et al.   Molecular Plant

An Innate Immunity Pathway in the MossPhyscomitrella patens

(2016) Simon Bressendorff et al.   PLANT CELL

TP53INP2/DOR protein chaperones deacetylated nuclear LC3 to the cytoplasm to promote macroautophagy

(2015) Xu Liu et al.   Autophagy

Phospholipase D and phosphatidic acid in plant defence response: from protein–protein and lipid–protein interactions to hormone signalling

(2015) Jian Zhao   JOURNAL OF EXPERIMENTAL BOTANY

Quantitative Phosphoproteomics of the Ataxia Telangiectasia-Mutated (ATM) and Ataxia Telangiectasia-Mutated and Rad3-related (ATR) Dependent DNA Damage Response inArabidopsis thaliana

(2015) Elisabeth Roitinger et al.   MOLECULAR & CELLULAR PROTEOMICS

Huntingtin functions as a scaffold for selective macroautophagy

(2015) Yan-Ning Rui et al.   NATURE CELL BIOLOGY

Autophagy and mTORC1 regulate the stochastic phase of somatic cell reprogramming

(2015) Yasong Wu et al.   NATURE CELL BIOLOGY

Proteostasis and aging

(2015) Susmita Kaushik et al.   NATURE MEDICINE

Optimizing experimental procedures for quantitative evaluation of crop plant performance in high throughput phenotyping systems

(2015) Astrid Junker et al.   Frontiers in Plant Science

Autophagy deficiency leads to accumulation of ubiquitinated proteins, ER stress, and cell death inArabidopsis

(2014) David Munch et al.   Autophagy

TBC1D5 and the AP2 complex regulate ATG9 trafficking and initiation of autophagy

(2014) D. Popovic et al.   EMBO REPORTS

MS Amanda, a Universal Identification Algorithm Optimized for High Accuracy Tandem Mass Spectra

(2014) Viktoria Dorfer et al.   JOURNAL OF PROTEOME RESEARCH

Stress, Inflammation, and Defense of Homeostasis

(2014) Raj Chovatiya et al.   MOLECULAR CELL

Epigenetics of Reprogramming to Induced Pluripotency

(2013) Bernadett Papp et al.   CELL

Transient Activation of Autophagy via Sox2-Mediated Suppression of mTOR Is an Important Early Step in Reprogramming to Pluripotency

(2013) Shuo Wang et al.   Cell Stem Cell

Coordination of Translational Control and Protein Homeostasis during Severe Heat Stress

(2013) Valeria Cherkasov et al.   CURRENT BIOLOGY

Eight types of stem cells in the life cycle of the moss Physcomitrella patens

(2013) Rumiko Kofuji et al.   CURRENT OPINION IN PLANT BIOLOGY

Autophagy and metacaspase determine the mode of cell death in plants

(2013) Elena A. Minina et al.   JOURNAL OF CELL BIOLOGY

The Arabidopsis METACASPASE9 Degradome

(2013) L. Tsiatsiani et al.   PLANT CELL

ABA and the ubiquitin E3 ligase KEEP ON GOING affect proteolysis of theArabidopsis thalianatranscription factors ABF1 and ABF3

(2013) Yi-Tze Chen et al.   PLANT JOURNAL

Proteostasis and aging of stem cells

(2013) David Vilchez et al.   TRENDS IN CELL BIOLOGY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic adapters NBR1 and p62/SQSTM1

(2011) Steingrim Svenning et al.   Autophagy

The autophagy protein Atg7 is essential for hematopoietic stem cell maintenance

(2011) Monika Mortensen et al.   JOURNAL OF EXPERIMENTAL MEDICINE

PhyscomitrellaCyclin-Dependent Kinase A Links Cell Cycle Reactivation to Other Cellular Changes during Reprogramming of Leaf Cells

(2011) Masaki Ishikawa et al.   PLANT CELL

TheArabidopsisMultistress Regulator TSPO Is a Heme Binding Membrane Protein and a Potential Scavenger of Porphyrins via an Autophagy-Dependent Degradation Mechanism

(2011) Celine Vanhee et al.   PLANT CELL

ATG2, an autophagy-related protein, negatively affects powdery mildew resistance and mildew-induced cell death in Arabidopsis

(2011) Yiping Wang et al.   PLANT JOURNAL

Methods in Mammalian Autophagy Research

(2010) Noboru Mizushima et al.   CELL

Arabidopsis Regeneration from Multiple Tissues Occurs via a Root Development Pathway

(2010) Kaoru Sugimoto et al.   DEVELOPMENTAL CELL

Eaten alive: a history of macroautophagy

(2010) Zhifen Yang et al.   NATURE CELL BIOLOGY

Phenotypic plasticity in development and evolution: facts and concepts

(2010) G. Fusco et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phenotypic plasticity's impacts on diversification and speciation

(2010) David W. Pfennig et al.   TRENDS IN ECOLOGY & EVOLUTION

Autophagic Components Contribute to Hypersensitive Cell Death in Arabidopsis

(2009) Daniel Hofius et al.   CELL

The Arabidopsis TSPO-related protein is a stress and abscisic acid-regulated, endoplasmic reticulum-Golgi-localized membrane protein

(2009) Damien Guillaumot et al.   PLANT JOURNAL

Autophagy fights disease through cellular self-digestion

(2008) Noboru Mizushima et al.   NATURE