Ancient Rome: A genetic crossroads of Europe and the Mediterranean

The genomic history of the Iberian Peninsula over the past 8000 years

(2019) Iñigo Olalde et al.   SCIENCE

Making sense of medieval mouths: Investigating sex differences of dental pathological lesions in a late medieval Italian community

(2019) Trent M. Trombley et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

A Transient Pulse of Genetic Admixture from the Crusaders in the Near East Identified from Ancient Genome Sequences

(2019) Marc Haber et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Population structure of modern-day Italians reveals patterns of ancient and archaic ancestries in Southern Europe

(2019) A. Raveane et al.   Science Advances

137 ancient human genomes from across the Eurasian steppes

(2018) Peter de Barros Damgaard et al.   NATURE

Population genomic analysis of elongated skulls reveals extensive female-biased immigration in Early Medieval Bavaria

(2018) Krishna R. Veeramah et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe

(2018) Rosa Fregel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic and Strontium Isotope Variation Reveal Immigration Patterns in a Viking Age Town

(2018) Maja Krzewińska et al.   CURRENT BIOLOGY

The genomic history of southeastern Europe

(2018) Iain Mathieson et al.   NATURE

The Beaker phenomenon and the genomic transformation of northwest Europe

(2018) Iñigo Olalde et al.   NATURE

Understanding 6th-century barbarian social organization and migration through paleogenomics

(2018) Carlos Eduardo G. Amorim et al.   Nature Communications

A genomic Neolithic time transect of hunter-farmer admixture in central Poland

(2018) D. M. Fernandes et al.   Scientific Reports

Ancient DNA of Phoenician remains indicates discontinuity in the settlement history of Ibiza

(2018) Pierre Zalloua et al.   Scientific Reports

Parallel palaeogenomic transects reveal complex genetic history of early European farmers

(2017) Mark Lipson et al.   NATURE

Change fast or change slow? Late Glacial and Early Holocene cultures in a changing environment at Grotta Continenza, Central Italy

(2017) Giovanni Boschian et al.   QUATERNARY INTERNATIONAL

The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods

(2017) Rui Martiniano et al.   PLoS Genetics

The ancient cline of haplogroup K implies that the Neolithic transition in Europe was mainly demic

(2017) Neus Isern et al.   Scientific Reports

The maternal genetic make-up of the Iberian Peninsula between the Neolithic and the Early Bronze Age

(2017) Anna Szécsényi-Nagy et al.   Scientific Reports

Plasmodium falciparum malaria in 1 st –2 nd century CE southern Italy

(2016) Stephanie Marciniak et al.   CURRENT BIOLOGY

The Demographic Development of the First Farmers in Anatolia

(2016) Gülşah Merve Kılınç et al.   CURRENT BIOLOGY

Genomic insights into the origin of farming in the ancient Near East

(2016) Iosif Lazaridis et al.   NATURE

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing

(2016) Hansi Weissensteiner et al.   NUCLEIC ACIDS RESEARCH

Early farmers from across Europe directly descended from Neolithic Aegeans

(2016) Zuzana Hofmanová et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Iron Age and Anglo-Saxon genomes from East England reveal British migration history

(2016) Stephan Schiffels et al.   Nature Communications

A European Mitochondrial Haplotype Identified in Ancient Phoenician Remains from Carthage, North Africa

(2016) Elizabeth A. Matisoo-Smith et al.   PLoS One

The Italian genome reflects the history of Europe and the Mediterranean basin

(2015) Giovanni Fiorito et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Genome-wide patterns of selection in 230 ancient Eurasians

(2015) Iain Mathieson et al.   NATURE

Massive migration from the steppe was a source for Indo-European languages in Europe

(2015) Wolfgang Haak et al.   NATURE

Visualizing spatial population structure with estimated effective migration surfaces

(2015) Desislava Petkova et al.   NATURE GENETICS

Large-scale recent expansion of European patrilineages shown by population resequencing

(2015) Chiara Batini et al.   Nature Communications

Upper Palaeolithic genomes reveal deep roots of modern Eurasians

(2015) Eppie R. Jones et al.   Nature Communications

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone

(2015) Ron Pinhasi et al.   PLoS One

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Ancient human genomes suggest three ancestral populations for present-day Europeans

(2014) Iosif Lazaridis et al.   NATURE

Partial uracil-DNA-glycosylase treatment for screening of ancient DNA

(2014) N. Rohland et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Genetic Atlas of Human Admixture History

(2014) G. Hellenthal et al.   SCIENCE

Genomic Diversity and Admixture Differs for Stone-Age Scandinavian Foragers and Farmers

(2014) P. Skoglund et al.   SCIENCE

Genome flux and stasis in a five millennium transect of European prehistory

(2014) Cristina Gamba et al.   Nature Communications

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

(2013) Hákon Jónsson et al.   BIOINFORMATICS

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

(2013) Maanasa Raghavan et al.   NATURE

Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments

(2013) J. Dabney et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans

(2013) Paul Brotherton et al.   Nature Communications

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

Extremely low-coverage sequencing and imputation increases power for genome-wide association studies

(2012) Bogdan Pasaniuc et al.   NATURE GENETICS

Complete Mitochondrial Genomes Reveal Neolithic Expansion into Europe

(2012) Qiaomei Fu et al.   PLoS One

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing

(2012) Andreas Keller et al.   Nature Communications

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Robust relationship inference in genome-wide association studies

(2010) Ani Manichaikul et al.   BIOINFORMATICS

The genome-wide structure of the Jewish people

(2010) Doron M. Behar et al.   NATURE

Water-related occupations and diet in two Roman coastal communities (Italy, first to third century AD): Correlation between stable carbon and nitrogen isotope values and auricular exostosis prevalence

(2009) Fiona Crowe et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Population Structure in Contemporary Sweden-A Y-Chromosomal and Mitochondrial DNA Analysis

(2008) T. Lappalainen et al.   ANNALS OF HUMAN GENETICS

The consilience of historical and isotopic approaches in reconstructing the medieval Mediterranean diet

(2008) M. Salamon et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Lakeside Cemeteries in the Sahara: 5000 Years of Holocene Population and Environmental Change

(2008) Paul C. Sereno et al.   PLoS One