Genomic Diversity and Admixture Differs for Stone-Age Scandinavian Foragers and Farmers

Balancing Selection Is the Main Force Shaping the Evolution of Innate Immunity Genes

(2014) A. Ferrer-Admetlla et al.   JOURNAL OF IMMUNOLOGY

The genome of a Late Pleistocene human from a Clovis burial site in western Montana

(2014) Morten Rasmussen et al.   NATURE

Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European

(2014) Iñigo Olalde et al.   NATURE

Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal

(2014) Pontus Skoglund et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Autosomal and uniparental portraits of the native populations of Sakha (Yakutia): implications for the peopling of Northeast Eurasia

(2013) Sardana A Fedorova et al.   BMC EVOLUTIONARY BIOLOGY

Identifying Recent Adaptations in Large-Scale Genomic Data

(2013) Sharon R. Grossman et al.   CELL

A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes

(2013) Qiaomei Fu et al.   CURRENT BIOLOGY

HAPLOFIND: A New Method for High-Throughput mtDNA Haplogroup Assignment

(2013) Dario Vianello et al.   HUMAN MUTATION

Seeing the Wood for the Trees: A Minimal Reference Phylogeny for the Human Y Chromosome

(2013) Mannis van Oven et al.   HUMAN MUTATION

Accurate sex identification of ancient human remains using DNA shotgun sequencing

(2013) Pontus Skoglund et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

The complete genome sequence of a Neanderthal from the Altai Mountains

(2013) Kay Prüfer et al.   NATURE

Ensembl 2014

(2013) Paul Flicek et al.   NUCLEIC ACIDS RESEARCH

Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity

(2013) G. Brandt et al.   SCIENCE

2000 Years of Parallel Societies in Stone Age Central Europe

(2013) R. Bollongino et al.   SCIENCE

The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent

(2013) Chandana Basu Mallick et al.   PLoS Genetics

Ancient DNA Reveals Prehistoric Gene-Flow from Siberia in the Complex Human Population History of North East Europe

(2013) Clio Der Sarkissian et al.   PLoS Genetics

Predicting homo pigmentation phenotype through genomic data: From neanderthal to James Watson

(2012) Caio C S Cerqueira et al.   AMERICAN JOURNAL OF HUMAN BIOLOGY

Ancestry of modern Europeans: contributions of ancient DNA

(2012) Marie Lacan et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Genomic Affinities of Two 7,000-Year-Old Iberian Hunter-Gatherers

(2012) Federico Sánchez-Quinto et al.   CURRENT BIOLOGY

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Genetic variation in Toll-like receptors and disease susceptibility

(2012) Mihai G Netea et al.   NATURE IMMUNOLOGY

Ancient DNA from Hunter-Gatherer and Farmer Groups from Northern Spain Supports a Random Dispersion Model for the Neolithic Expansion into Europe

(2012) Montserrat Hervella et al.   PLoS One

Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe

(2012) P. Skoglund et al.   SCIENCE

A High-Coverage Genome Sequence from an Archaic Denisovan Individual

(2012) M. Meyer et al.   SCIENCE

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing

(2012) Andreas Keller et al.   Nature Communications

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

Denisova Admixture and the First Modern Human Dispersals into Southeast Asia and Oceania

(2011) David Reich et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Shared and Unique Components of Human Population Structure and Genome-Wide Signals of Positive Selection in South Asia

(2011) Mait Metspalu et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genetic adaptation of the antibacterial human innate immunity network

(2011) Ferran Casals et al.   BMC EVOLUTIONARY BIOLOGY

The selective footprints of viral pressures at the human RIG-I-like receptor family

(2011) Estelle Vasseur et al.   HUMAN MOLECULAR GENETICS

Evolutionary genetics evidence of an essential, nonredundant role of the IFN-γ pathway in protective immunity

(2011) Jérémy Manry et al.   HUMAN MUTATION

Evolutionary genetic dissection of human interferons

(2011) Jérémy Manry et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Testing for Ancient Admixture between Closely Related Populations

(2011) Eric Y. Durand et al.   MOLECULAR BIOLOGY AND EVOLUTION

Swedish Population Substructure Revealed by Genome-Wide Single Nucleotide Polymorphism Data

(2011) Elina Salmela et al.   PLoS One

Archaic human ancestry in East Asia

(2011) P. Skoglund et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient DNA suggests the leading role played by men in the Neolithic dissemination

(2011) M. Lacan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient DNA reveals male diffusion through the Neolithic Mediterranean route

(2011) M. Lacan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia

(2011) M. Rasmussen et al.   SCIENCE

Signatures of Environmental Genetic Adaptation Pinpoint Pathogens as the Main Selective Pressure through Human Evolution

(2011) Matteo Fumagalli et al.   PLoS Genetics

High frequency of lactose intolerance in a prehistoric hunter-gatherer population in northern Europe

(2010) Helena Malmström et al.   BMC EVOLUTIONARY BIOLOGY

A Complete mtDNA Genome of an Early Modern Human from Kostenki, Russia

(2010) Johannes Krause et al.   CURRENT BIOLOGY

Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging

(2010) I. Surakka et al.   GENOME RESEARCH

The genome-wide structure of the Jewish people

(2010) Doron M. Behar et al.   NATURE

Genetic history of an archaic hominin group from Denisova Cave in Siberia

(2010) David Reich et al.   NATURE

Ancient human genome sequence of an extinct Palaeo-Eskimo

(2010) Morten Rasmussen et al.   NATURE

Ancient DNA from European Early Neolithic Farmers Reveals Their Near Eastern Affinities

(2010) Wolfgang Haak et al.   PLOS BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Ancient DNA Reveals Lack of Continuity between Neolithic Hunter-Gatherers and Contemporary Scandinavians

(2009) Helena Malmström et al.   CURRENT BIOLOGY

Climate and Demography in Early Prehistory: Using Calibrated14C Dates as Population Proxies

(2009) Felix Riede   HUMAN BIOLOGY

Reconstructing Indian population history

(2009) David Reich et al.   NATURE

Genetic Discontinuity Between Local Hunter-Gatherers and Central Europe's First Farmers

(2009) B. Bramanti et al.   SCIENCE

Evolutionary Dynamics of Human Toll-Like Receptors and Their Different Contributions to Host Defense

(2009) Luis B. Barreiro et al.   PLoS Genetics

Genes mirror geography within Europe

(2008) John Novembre et al.   NATURE

Ancient DNA, Strontium isotopes, and osteological analyses shed light on social and kinship organization of the Later Stone Age

(2008) W. Haak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation

(2008) J. Z. Li et al.   SCIENCE