Meta-iAVP: A Sequence-Based Meta-Predictor for Improving the Prediction of Antiviral Peptides Using Effective Feature Representation

AntiVPP 1.0: A portable tool for prediction of antiviral peptides

(2019) Jorge Félix Beltrán Lissabet et al.   COMPUTERS IN BIOLOGY AND MEDICINE

mACPpred: A Support Vector Machine-Based Meta-Predictor for Identification of Anticancer Peptides

(2019) Vinothini Boopathi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

ACPred: A Computational Tool for the Prediction and Analysis of Anticancer Peptides

(2019) Nalini Schaduangrat et al.   MOLECULES

Heterologous Machine Learning for the Identification of Antimicrobial Activity in Human-Targeted Drugs

(2019) Rodrigo Nava Lara et al.   MOLECULES

HIVCoR: A sequence-based tool for predicting HIV-1 CRF01_AE coreceptor usage

(2019) Sayamon Hongjaisee et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

THPep: A machine learning-based approach for predicting tumor homing peptides

(2019) Watshara Shoombuatong et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

TargetAntiAngio: A Sequence-Based Tool for the Prediction and Analysis of Anti-Angiogenic Peptides

(2019) Vishuda Laengsri et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Meta-4mCpred: A Sequence-Based Meta-Predictor for Accurate DNA 4mC Site Prediction Using Effective Feature Representation

(2019) Balachandran Manavalan et al.   Molecular Therapy-Nucleic Acids

Peptide Antiviral Strategies as an Alternative to Treat Lower Respiratory Viral Infections

(2019) Origène Nyanguile   Frontiers in Immunology

DRAMP 2.0, an updated data repository of antimicrobial peptides

(2019) Xinyue Kang et al.   Scientific Data

Therapeutic peptides: Historical perspectives, current development trends, and future directions

(2018) Jolene L. Lau et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Microcephaly epidemic related to the Zika virus and living conditions in Recife, Northeast Brazil

(2018) Wayner Vieira de Souza et al.   BMC PUBLIC HEALTH

Global Polio Eradication – Way Ahead

(2018) Sunil Bahl et al.   INDIAN JOURNAL OF PEDIATRICS

PAAP: a web server for predicting antihypertensive activity of peptides

(2018) Thet Su Win et al.   Future Medicinal Chemistry

Enhanced Prediction of Hot Spots at Protein-Protein Interfaces Using Extreme Gradient Boosting

(2018) Hao Wang et al.   Scientific Reports

PIP-EL: A New Ensemble Learning Method for Improved Proinflammatory Peptide Predictions

(2018) Balachandran Manavalan et al.   Frontiers in Immunology

iBCE-EL: A New Ensemble Learning Framework for Improved Linear B-Cell Epitope Prediction

(2018) Balachandran Manavalan et al.   Frontiers in Immunology

mAHTPred: a sequence-based meta-predictor for improving the prediction of anti-hypertensive peptides using effective feature representation

(2018) Balachandran Manavalan et al.   BIOINFORMATICS

Anti-flavi: A Web Platform to Predict Inhibitors of Flaviviruses Using QSAR and Peptidomimetic Approaches

(2018) Akanksha Rajput et al.   Frontiers in Microbiology

HemoPred: a web server for predicting the hemolytic activity of peptides

(2017) Thet Su Win et al.   Future Medicinal Chemistry

Large-Scale Analysis of Antimicrobial Activities in Relation to Amphipathicity and Charge Reveals Novel Characterization of Antimicrobial Peptides

(2017) Chien-Kuo Wang et al.   MOLECULES

aBiofilm: a resource of anti-biofilm agents and their potential implications in targeting antibiotic drug resistance

(2017) Akanksha Rajput et al.   NUCLEIC ACIDS RESEARCH

A clinical approach to the threat of emerging influenza viruses in the Asia-Pacific region

(2017) David S.C. Hui et al.   RESPIROLOGY

MLACP: machine-learning-based prediction of anticancer peptides

(2017) Balachandran Manavalan et al.   Oncotarget

PepBio: predicting the bioactivity of host defense peptides

(2017) Saw Simeon et al.   RSC Advances

Identification of Entry Factors Involved in Hepatitis C Virus Infection Based on Host-Mimicking Short Linear Motifs

(2017) Austin W. T. Chiang et al.   PLoS Computational Biology

CryoProtect: A Web Server for Classifying Antifreeze Proteins from Nonantifreeze Proteins

(2017) Reny Pratiwi et al.   Journal of Chemistry

A screen for inhibitory peptides of hepatitis C virus identifies a novel entry inhibitor targeting E1 and E2

(2017) Peiqi Yin et al.   Scientific Reports

Molecular dynamics exploration of poration and leaking caused by Kalata B1 in HIV-infected cell membrane compared to host and HIV membranes

(2017) Wanapinun Nawae et al.   Scientific Reports

Lactoferrin-derived Peptides Active towards Influenza: Identification of Three Potent Tetrapeptide Inhibitors

(2017) Maria Carmina Scala et al.   Scientific Reports

Extending proteochemometric modeling for unraveling the sorption behavior of compound–soil interaction

(2016) Watshara Shoombuatong et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Approved Antiviral Drugs over the Past 50 Years

(2016) Erik De Clercq et al.   CLINICAL MICROBIOLOGY REVIEWS

Treatment of chronic hepatitis D with the entry inhibitor myrcludex B: First results of a phase Ib/IIa study

(2016) Pavel Bogomolov et al.   JOURNAL OF HEPATOLOGY

osFP: a web server for predicting the oligomeric states of fluorescent proteins

(2016) Saw Simeon et al.   Journal of Cheminformatics

iACP: a sequence-based tool for identifying anticancer peptides

(2016) Wei Chen et al.   Oncotarget

Exploring the chemical space of influenza neuraminidase inhibitors

(2016) Nuttapat Anuwongcharoen et al.   PeerJ

New vaccines: challenges of discovery

(2016) Adel Mahmoud   Microbial Biotechnology

DRAMP: a comprehensive data repository of antimicrobial peptides

(2016) Linlin Fan et al.   Scientific Reports

protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences

(2015) Nan Xiao et al.   BIOINFORMATICS

Sequence based human leukocyte antigen gene prediction using informative physicochemical properties

(2015) Watshara Shoombuatong et al.   International Journal of Data Mining and Bioinformatics

Impacts of Bioinformatics to Medicinal Chemistry

(2015) Kuo-Chen Chou   Medicinal Chemistry

Broad-spectrum antivirals against viral fusion

(2015) Frederic Vigant et al.   NATURE REVIEWS MICROBIOLOGY

SATPdb: a database of structurally annotated therapeutic peptides

(2015) Sandeep Singh et al.   NUCLEIC ACIDS RESEARCH

DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides

(2015) Malak Pirtskhalava et al.   NUCLEIC ACIDS RESEARCH

Prediction and Analysis of Quorum Sensing Peptides Based on Sequence Features

(2015) Akanksha Rajput et al.   PLoS One

Building Predictive Models inRUsing thecaretPackage

(2015) Max Kuhn   Journal of Statistical Software

FactoMineR: AnRPackage for Multivariate Analysis

(2015) Sébastien Lê et al.   Journal of Statistical Software

Peptide entry inhibitors of enveloped viruses: The importance of interfacial hydrophobicity

(2014) Hussain Badani et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

SCMHBP: prediction and analysis of heme binding proteins using propensity scores of dipeptides

(2014) Yi-Fan Liou et al.   BMC BIOINFORMATICS

Identification of natural antimicrobial agents to treat dengue infection: In vitro analysis of latarcin peptide activity against dengue virus

(2014) Hussin A Rothan et al.   BMC MICROBIOLOGY

Unraveling the Web of Viroinformatics: Computational Tools and Databases in Virus Research

(2014) Deepak Sharma et al.   JOURNAL OF VIROLOGY

Exploring the origins of structure–oxygen affinity relationship of human haemoglobin allosteric effector

(2014) Prasit Mandi et al.   MOLECULAR SIMULATION

Propensity Scores for Prediction and Characterization of Bioluminescent Proteins from Sequences

(2014) Hui-Ling Huang   PLoS One

Antiretroviral Drug Resistance Profiles and Response to Second-Line Therapy Among HIV Type 1-Infected Ugandan Children

(2013) Victor Musiime et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Cationic Host Defence Peptides: Potential as Antiviral Therapeutics

(2013) Emily Gwyer Findlay et al.   BIODRUGS

Predicting anticancer peptides with Chou′s pseudo amino acid composition and investigating their mutagenicity via Ames test

(2013) Zohre Hajisharifi et al.   JOURNAL OF THEORETICAL BIOLOGY

AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses

(2013) Abid Qureshi et al.   NUCLEIC ACIDS RESEARCH

Analysis and Prediction of Highly Effective Antiviral Peptides Based on Random Forests

(2013) Kuan Y. Chang et al.   PLoS One

The Human Cathelicidin LL-37 Has Antiviral Activity against Respiratory Syncytial Virus

(2013) Silke M. Currie et al.   PLoS One

SCMCRYS: Predicting Protein Crystallization Using an Ensemble Scoring Card Method with Estimating Propensity Scores of P-Collocated Amino Acid Pairs

(2013) Phasit Charoenkwan et al.   PLoS One

Prediction of human leukocyte antigen gene using k-nearest neighbour classifier based on spectrum kernel

(2013) Watshara Shoombuatong et al.   SCIENCEASIA

Clinical Aspects of Cytomegalovirus Antiviral Resistance in Solid Organ Transplant Recipients

(2012) A. K. Le Page et al.   CLINICAL INFECTIOUS DISEASES

HIV-1 CRF01_AE coreceptor usage prediction using kernel methods based logistic model trees

(2012) Watshara Shoombuatong et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Mucroporin-M1 Inhibits Hepatitis B Virus Replication by Activating the Mitogen-activated Protein Kinase (MAPK) Pathway and Down-regulating HNF4αin Vitroandin Vivo

(2012) Zhenhuan Zhao et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Resurgence of Serine: An Often Neglected but Indispensable Amino Acid

(2012) Satish C. Kalhan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Protegrin-1 Inhibits Dengue NS2B-NS3 Serine Protease and Viral Replication in MK2 Cells

(2012) Hussin A. Rothan et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Mutations Conferring Resistance to Viral DNA Polymerase Inhibitors in Camelpox Virus Give Different Drug-Susceptibility Profiles in Vaccinia Virus

(2012) S. Duraffour et al.   JOURNAL OF VIROLOGY

AVPpred: collection and prediction of highly effective antiviral peptides

(2012) Nishant Thakur et al.   NUCLEIC ACIDS RESEARCH

Human viruses: discovery and emergence

(2012) M. Woolhouse et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phage Display of Combinatorial Peptide Libraries: Application to Antiviral Research

(2011) Guillaume Castel et al.   MOLECULES

Letter to the Editor: Stability of Random Forest importance measures

(2010) M. L. Calle et al.   BRIEFINGS IN BIOINFORMATICS

Some remarks on protein attribute prediction and pseudo amino acid composition

(2010) Kuo-Chen Chou   JOURNAL OF THEORETICAL BIOLOGY

Viral Serine/Threonine Protein Kinases

(2010) T. Jacob et al.   JOURNAL OF VIROLOGY

Estimating classification error rate: Repeated cross-validation, repeated hold-out and bootstrap

(2009) Ji-Hyun Kim   COMPUTATIONAL STATISTICS & DATA ANALYSIS

Cyclotides as templates in drug design

(2009) Sónia Troeira Henriques et al.   DRUG DISCOVERY TODAY

Conserved Threonine Residues within the A-Loop of the Receptor NIK Differentially Regulate the Kinase Function Required for Antiviral Signaling

(2009) Anésia A. Santos et al.   PLoS One

CDK/ERK-mediated phosphorylation of the human influenza A virus NS1 protein at threonine-215

(2008) Benjamin G. Hale et al.   VIROLOGY