SCMHBP: prediction and analysis of heme binding proteins using propensity scores of dipeptides

Propensity Scores for Prediction and Characterization of Bioluminescent Proteins from Sequences

(2014) Hui-Ling Huang   PLoS One

Electron Transfer Interactome of Cytochrome c

(2012) Alexander N. Volkov et al.   PLoS Computational Biology

pH-Dependent Conformational Changes in Proteins and Their Effect on Experimental pKas: The Case of Nitrophorin 4

(2012) Natali V. Di Russo et al.   PLoS Computational Biology

Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties

(2011) Hui-Lin Huang et al.   BMC BIOINFORMATICS

Statistical mechanics of protein allostery: Roles of backbone and side-chain structural fluctuations

(2011) Kazuhito Itoh et al.   JOURNAL OF CHEMICAL PHYSICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

The IsdC Protein fromStaphylococcus aureusUses a Flexible Binding Pocket to Capture Heme

(2008) Valerie A. Villareal et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The chemistry and biochemistry of heme c: functional bases for covalent attachment

(2008) Sarah E. J. Bowman et al.   NATURAL PRODUCT REPORTS

Ligand preference and orientation in b- and c-type heme-binding proteins

(2008) Christian Fufezan et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS