COMPASS for rapid combinatorial optimization of biochemical pathways based on artificial transcription factors
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
COMPASS for rapid combinatorial optimization of biochemical pathways based on artificial transcription factors
Authors
Keywords
-
Journal
Nature Communications
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-06-13
DOI
10.1038/s41467-019-10224-x
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A Single-Component Optogenetic System Allows Stringent Switch of Gene Expression in Yeast Cells
- (2018) Xiaopei Xu et al. ACS Synthetic Biology
- PhiReX: a programmable and red light-regulated protein expression switch for yeast
- (2017) Lena Hochrein et al. NUCLEIC ACIDS RESEARCH
- Antisense oligonucleotides targeting translation inhibitory elements in 5′ UTRs can selectively increase protein levels
- (2017) Xue-hai Liang et al. NUCLEIC ACIDS RESEARCH
- Combinatorial metabolic engineering using an orthogonal tri-functional CRISPR system
- (2017) Jiazhang Lian et al. Nature Communications
- Plant-Derived Transcription Factors for Orthologous Regulation of Gene Expression in the Yeast Saccharomyces cerevisiae
- (2017) Gita Naseri et al. ACS Synthetic Biology
- Directed evolution of a recombinase that excises the provirus of most HIV-1 primary isolates with high specificity
- (2016) Janet Karpinski et al. NATURE BIOTECHNOLOGY
- Engineering prokaryotic transcriptional activators as metabolite biosensors in yeast
- (2016) Mette L Skjoedt et al. Nature Chemical Biology
- A Cas9-based toolkit to program gene expression inSaccharomyces cerevisiae
- (2016) Amanda Reider Apel et al. NUCLEIC ACIDS RESEARCH
- A highly precise and portable genome engineering method allows comparison of mutational effects across bacterial species
- (2016) Ákos Nyerges et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Rationally reduced libraries for combinatorial pathway optimization minimizing experimental effort
- (2016) Markus Jeschek et al. Nature Communications
- The Genomic Landscape of Position Effects on Protein Expression Level and Noise in Yeast
- (2016) Xiaoshu Chen et al. Cell Systems
- Positive selection improves the efficiency of DNA assembly
- (2015) Chang-Ho Baek et al. ANALYTICAL BIOCHEMISTRY
- Development of biosensors and their application in metabolic engineering
- (2015) Jie Zhang et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Versatile genetic assembly system (VEGAS) to assemble pathways for expression inS. cerevisiae
- (2015) Leslie A. Mitchell et al. NUCLEIC ACIDS RESEARCH
- YeastFab: the design and construction of standard biological parts for metabolic engineering inSaccharomyces cerevisiae
- (2015) Yakun Guo et al. NUCLEIC ACIDS RESEARCH
- ePathOptimize: A Combinatorial Approach for Transcriptional Balancing of Metabolic Pathways
- (2015) J. Andrew Jones et al. Scientific Reports
- A Highly Characterized Yeast Toolkit for Modular, Multipart Assembly
- (2015) Michael E. Lee et al. ACS Synthetic Biology
- CasEMBLR: Cas9-Facilitated Multiloci Genomic Integration of in Vivo Assembled DNA Parts in Saccharomyces cerevisiae
- (2015) Tadas Jakočiu̅nas et al. ACS Synthetic Biology
- Advances in metabolic engineering of yeastSaccharomyces cerevisiaefor production of chemicals
- (2014) Irina Borodina et al. Biotechnology Journal
- Polycistronic expression of a β-carotene biosynthetic pathway in Saccharomyces cerevisiae coupled to β-ionone production
- (2014) Jules Beekwilder et al. JOURNAL OF BIOTECHNOLOGY
- Principles of genetic circuit design
- (2014) Jennifer A N Brophy et al. NATURE METHODS
- Estimating binding properties of transcription factors from genome-wide binding profiles
- (2014) Nicolae Radu Zabet et al. NUCLEIC ACIDS RESEARCH
- Biosynthesis of Taxadiene in Saccharomyces cerevisiae : Selection of Geranylgeranyl Diphosphate Synthase Directed by a Computer-Aided Docking Strategy
- (2014) Ming-zhu Ding et al. PLoS One
- Homology-Integrated CRISPR–Cas (HI-CRISPR) System for One-Step Multigene Disruption in Saccharomyces cerevisiae
- (2014) Zehua Bao et al. ACS Synthetic Biology
- Enhancing beta-carotene production inSaccharomyces cerevisiaeby metabolic engineering
- (2013) Qian Li et al. FEMS MICROBIOLOGY LETTERS
- A Synthetic Biology Framework for Programming Eukaryotic Transcription Functions
- (2012) Ahmad S. Khalil et al. CELL
- Characterization of plasmid burden and copy number inSaccharomyces cerevisiaefor optimization of metabolic engineering applications
- (2012) Ashty S. Karim et al. FEMS YEAST RESEARCH
- Combined metabolic engineering of precursor and co-factor supply to increase α-santalene production by Saccharomyces cerevisiae
- (2012) Gionata Scalcinati et al. Microbial Cell Factories
- Synthetic gene expression perturbation systems with rapid, tunable, single-gene specificity in yeast
- (2012) R. Scott McIsaac et al. NUCLEIC ACIDS RESEARCH
- SLiCE: a novel bacterial cell extract-based DNA cloning method
- (2012) Yongwei Zhang et al. NUCLEIC ACIDS RESEARCH
- Production of amorphadiene in yeast, and its conversion to dihydroartemisinic acid, precursor to the antimalarial agent artemisinin
- (2012) P. J. Westfall et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Driving Forces Enable High-Titer Anaerobic 1-Butanol Synthesis in Escherichia coli
- (2011) Claire R. Shen et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Enzyme mechanism as a kinetic control element for designing synthetic biofuel pathways
- (2011) Brooks B Bond-Watts et al. Nature Chemical Biology
- Isolation of circular yeast artificial chromosomes for synthetic biology and functional genomics studies
- (2010) Vladimir N Noskov et al. Nature Protocols
- Diversity-based, model-guided construction of synthetic gene networks with predicted functions
- (2009) Tom Ellis et al. NATURE BIOTECHNOLOGY
- Synthetic protein scaffolds provide modular control over metabolic flux
- (2009) John E Dueber et al. NATURE BIOTECHNOLOGY
- Automated design of synthetic ribosome binding sites to control protein expression
- (2009) Howard M Salis et al. NATURE BIOTECHNOLOGY
- Optimization of the mevalonate-based isoprenoid biosynthetic pathway in Escherichia coli for production of the anti-malarial drug precursor amorpha-4,11-diene
- (2008) Jennifer R. Anthony et al. METABOLIC ENGINEERING
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now