Multi-omics analysis unravels a segregated metabolic flux network that tunes co-utilization of sugar and aromatic carbons in Pseudomonas putida
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Multi-omics analysis unravels a segregated metabolic flux network that tunes co-utilization of sugar and aromatic carbons in Pseudomonas putida
Authors
Keywords
-
Journal
JOURNAL OF BIOLOGICAL CHEMISTRY
Volume 294, Issue 21, Pages 8464-8479
Publisher
American Society for Biochemistry & Molecular Biology (ASBMB)
Online
2019-04-02
DOI
10.1074/jbc.ra119.007885
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- GC-MS-based 13C metabolic flux analysis resolves the parallel and cyclic glucose metabolism of Pseudomonas putida KT2440 and Pseudomonas aeruginosa PAO1
- (2019) Michael Kohlstedt et al. METABOLIC ENGINEERING
- Refactoring the upper sugar metabolism of Pseudomonas putida for co-utilization of cellobiose, xylose, and glucose
- (2018) Pavel Dvořák et al. METABOLIC ENGINEERING
- Parallel comparative proteomics and phosphoproteomics reveal that cattle myostatin regulates phosphorylation of key enzymes in glycogen metabolism and glycolysis pathway
- (2018) Shuping Yang et al. Oncotarget
- The Metabolic Redox Regime of Pseudomonas putida Tunes Its Evolvability toward Novel Xenobiotic Substrates
- (2018) Özlem Akkaya et al. mBio
- A Cyclic Metabolic Network in Pseudomonas protegens Pf-5 Prioritizes the Entner-Doudoroff Pathway and Exhibits Substrate Hierarchy during Carbohydrate Co-Utilization
- (2018) Rebecca A. Wilkes et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
- (2016) Eugeni Belda et al. ENVIRONMENTAL MICROBIOLOGY
- Metabolite concentrations, fluxes and free energies imply efficient enzyme usage
- (2016) Junyoung O Park et al. Nature Chemical Biology
- Proteome and carbon flux analysis ofPseudomonas aeruginosaclinical isolates from different infection sites
- (2016) Christian Lassek et al. PROTEOMICS
- Systems-level analysis of mechanisms regulating yeast metabolic flux
- (2016) S. R. Hackett et al. SCIENCE
- Microbial utilization of lignin: available biotechnologies for its degradation and valorization
- (2016) Martín A. Palazzolo et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Adipic acid production from lignin
- (2015) Derek R. Vardon et al. Energy & Environmental Science
- The Crc/CrcZ-CrcY global regulatory system helps the integration of gluconeogenic and glycolytic metabolism inPseudomonas putida
- (2015) Ruggero La Rosa et al. ENVIRONMENTAL MICROBIOLOGY
- High-resolution analysis of them-xylene/toluene biodegradation subtranscriptome ofPseudomonas putidamt-2
- (2015) Juhyun Kim et al. ENVIRONMENTAL MICROBIOLOGY
- Pseudomonas putidaKT2440 Strain Metabolizes Glucose through a Cycle Formed by Enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways
- (2015) Pablo I. Nikel et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Bypasses in intracellular glucose metabolism in iron-limitedPseudomonas putida
- (2015) Samantha S. Sasnow et al. MicrobiologyOpen
- Hierarchy in Pentose Sugar Metabolism in Clostridium acetobutylicum
- (2014) Ludmilla Aristilde et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The Functional Structure of Central Carbon Metabolism in Pseudomonas putida KT2440
- (2014) Suresh Sudarsan et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Reconciling in vivo and in silico key biological parameters of Pseudomonas putida KT2440 during growth on glucose under carbon-limited condition
- (2013) Jozef BJH van Duuren et al. BMC BIOTECHNOLOGY
- Metabolic and regulatory rearrangements underlying glycerol metabolism inPseudomonas putida KT2440
- (2013) Pablo I. Nikel et al. ENVIRONMENTAL MICROBIOLOGY
- Proteomic Comparison of Historic and Recently Emerged Hypervirulent Clostridium difficile Strains
- (2013) Jenn-Wei Chen et al. JOURNAL OF PROTEOME RESEARCH
- Steady-State Metabolite Concentrations Reflect a Balance between Maximizing Enzyme Efficiency and Minimizing Total Metabolite Load
- (2013) Naama Tepper et al. PLoS One
- Industrial biotechnology of Pseudomonas putida and related species
- (2012) Ignacio Poblete-Castro et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- 13CFLUX2—high-performance software suite for 13C-metabolic flux analysis
- (2012) Michael Weitzel et al. BIOINFORMATICS
- Decoding the genetic networks of environmental bacteria: regulatory moonlighting of the TOL system of Pseudomonas putida mt-2
- (2012) Rafael Silva-Rocha et al. ISME Journal
- Less is more: reduced catechol production permits Pseudomonas putida F1 to grow on styrene
- (2012) K. W. George et al. MICROBIOLOGY-SGM
- Evidence for Lignin Oxidation by the Giant Panda Fecal Microbiome
- (2012) Wei Fang et al. PLoS One
- pH-stat fed-batch process to enhance the production of cis, cis-muconate from benzoate by Pseudomonas putida KT2440-JD1
- (2011) Jozef B. J. H. van Duuren et al. BIOTECHNOLOGY PROGRESS
- Evaluation of Different Multidimensional LC–MS/MS Pipelines for Isobaric Tags for Relative and Absolute Quantitation (iTRAQ)-Based Proteomic Analysis of Potato Tubers in Response to Cold Storage
- (2011) Yong Yang et al. JOURNAL OF PROTEOME RESEARCH
- Metabolomic Analysis and Visualization Engine for LC−MS Data
- (2010) Eugene Melamud et al. ANALYTICAL CHEMISTRY
- The emerging role for bacteria in lignin degradation and bio-product formation
- (2010) Timothy DH Bugg et al. CURRENT OPINION IN BIOTECHNOLOGY
- Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
- (2009) Bryson D Bennett et al. Nature Chemical Biology
- 13C-based metabolic flux analysis
- (2009) Nicola Zamboni et al. Nature Protocols
- The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation
- (2009) R. Moreno et al. NUCLEIC ACIDS RESEARCH
- Catabolic pathways and cellular responses ofPseudomonas putidaP8 during growth on benzoate with a proteomics approach
- (2008) Bin Cao et al. BIOTECHNOLOGY AND BIOENGINEERING
- Carbon catabolite repression in bacteria: many ways to make the most out of nutrients
- (2008) Boris Görke et al. NATURE REVIEWS MICROBIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now