Metabolic and regulatory rearrangements underlying glycerol metabolism inPseudomonas putida KT2440

New insights on the reorganization of gene transcription in Pseudomonas putida KT2440 at elevated pressure

(2013) Stéphanie Follonier et al.   Microbial Cell Factories

Accumulation of inorganic polyphosphate enables stress endurance and catalytic vigour in Pseudomonas putida KT2440

(2013) Pablo I Nikel et al.   Microbial Cell Factories

Transcriptional activation of the CrcZ and CrcY regulatory RNAs by the CbrB response regulator inPseudomonas putida

(2013) Sofía Muñoz García-Mauriño et al.   MOLECULAR MICROBIOLOGY

Transcriptomic fingerprinting ofPseudomonas putidaunder alternative physiological regimes

(2013) Juhyun Kim et al.   Environmental Microbiology Reports

ESCHERICHIA COLI REDOX MUTANTS AS MICROBIAL CELL FACTORIES FOR THE SYNTHESIS OF REDUCED BIOCHEMICALS

(2013) Jimena A. Ruiz et al.   Computational and Structural Biotechnology Journal

Industrial biotechnology of Pseudomonas putida and related species

(2012) Ignacio Poblete-Castro et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Glycerine and levulinic acid: Renewable co-substrates for the fermentative synthesis of short-chain poly(hydroxyalkanoate) biopolymers

(2012) Richard D. Ashby et al.   BIORESOURCE TECHNOLOGY

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

The role of GlpR repressor inPseudomonas putidaKT2440 growth and PHA production from glycerol

(2012) I. F. Escapa et al.   ENVIRONMENTAL MICROBIOLOGY

The Entner-Doudoroff pathway empowersPseudomonas putida KT2440 with a high tolerance to oxidative stress

(2012) Max Chavarría et al.   ENVIRONMENTAL MICROBIOLOGY

Occurrence of glycerol uptake inDunaliella tertiolectaunder hyperosmotic stress

(2012) Huixin Lin et al.   FEBS Journal

Implantation of unmarked regulatory and metabolic modules in Gram-negative bacteria with specialised mini-transposon delivery vectors

(2012) Pablo I. Nikel et al.   JOURNAL OF BIOTECHNOLOGY

Engineering an anaerobic metabolic regime in Pseudomonas putida KT2440 for the anoxic biodegradation of 1,3-dichloroprop-1-ene

(2012) Pablo I. Nikel et al.   METABOLIC ENGINEERING

New insights into Escherichia coli metabolism: carbon scavenging, acetate metabolism and carbon recycling responses during growth on glycerol

(2012) Karla Martínez-Gómez et al.   Microbial Cell Factories

Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440

(2011) Esteban Martínez-García et al.   ENVIRONMENTAL MICROBIOLOGY

Functional and Metabolic Effects of Adaptive Glycerol Kinase (GLPK) Mutants inEscherichia coli

(2011) M. Kenyon Applebee et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Two small RNAs, CrcY and CrcZ, act in concert to sequester the Crc global regulator in Pseudomonas putida, modulating catabolite repression

(2011) Renata Moreno et al.   MOLECULAR MICROBIOLOGY

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

Regulation and Function of Versatile Aerobic and Anaerobic Respiratory Metabolism in Pseudomonas aeruginosa

(2011) Hiroyuki Arai   Frontiers in Microbiology

The glycerophospholipid inventory of Pseudomonas putida is conserved between strains and enables growth condition-related alterations

(2011) Jana Rühl et al.   Microbial Biotechnology

Effects of calorie restriction on life span of microorganisms

(2010) Craig Skinner et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The osmotic stress tolerance of basidiomycetous yeasts

(2010) Obakeng M. Tekolo et al.   FEMS YEAST RESEARCH

Monitoring differences in gene expression levels and polyhydroxyalkanoate (PHA) production in Pseudomonas putida KT2440 grown on different carbon sources

(2010) Qin Wang et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes

(2010) G. L. Winsor et al.   NUCLEIC ACIDS RESEARCH

Glycerol Utilization Gene Cluster in Streptomyces clavuligerus

(2009) S. Banos et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Next generation sequencing of microbial transcriptomes: challenges and opportunities

(2009) Arnoud H.M. van Vliet   FEMS MICROBIOLOGY LETTERS

Glycerol: A promising and abundant carbon source for industrial microbiology

(2008) Gervásio Paulo da Silva et al.   BIOTECHNOLOGY ADVANCES

A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory

(2008) Juan Nogales et al.   BMC Systems Biology

The coordinate regulation of multiple terminal oxidases by the Pseudomonas putida ANR global regulator

(2008) Ana Ugidos et al.   ENVIRONMENTAL MICROBIOLOGY

DOOR: a database for prokaryotic operons

(2008) Fenglou Mao et al.   NUCLEIC ACIDS RESEARCH

Genome-Scale Reconstruction and Analysis of the Pseudomonas putida KT2440 Metabolic Network Facilitates Applications in Biotechnology

(2008) Jacek Puchałka et al.   PLoS Computational Biology