Transcript analyses reveal a comprehensive role of abscisic acid in modulating fruit ripening in Chinese jujube

Effect of abscisic acid (ABA) and chitosan / nano-silica / sodium alginate composite film on the color development and quality of postharvest Chinese winter jujube ( Zizyphus jujuba Mill. cv. Dongzao)

(2018) Xiaohong Kou et al.   FOOD CHEMISTRY

Transcript analyses of ethylene pathway genes during ripening of Chinese jujube fruit

(2018) Zhong Zhang et al.   JOURNAL OF PLANT PHYSIOLOGY

Proteomics analysis to understand the ABA stimulation of wound suberization in kiwifruit

(2018) Xueyuan Han et al.   Journal of Proteomics

The genomic and functional landscapes of developmental plasticity in the American cockroach

(2018) Sheng Li et al.   Nature Communications

Genome-wide identification of AP2/ERF superfamily genes and their expression during fruit ripening of Chinese jujube

(2018) Zhong Zhang et al.   Scientific Reports

Role of ABA and Gibberellin A3 on gene expression pattern of sugar transporters and invertases in Vitis vinifera cv. Malbec during berry ripening

(2017) Germán Murcia et al.   PLANT GROWTH REGULATION

Transcriptome profiling of Litchi chinensis pericarp in response to exogenous cytokinins and abscisic acid

(2017) Bing Hu et al.   PLANT GROWTH REGULATION

Abscisic acid pathway involved in the regulation of watermelon fruit ripening and quality trait evolution

(2017) Yanping Wang et al.   PLoS One

Abscisic Acid Is a Major Regulator of Grape Berry Ripening Onset: New Insights into ABA Signaling Network

(2017) Stefania Pilati et al.   Frontiers in Plant Science

Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle

(2017) Elizabeth Estrada-Johnson et al.   Frontiers in Plant Science

Transcriptome analysis of watermelon (Citrullus lanatus) fruits in response to Cucumber green mottle mosaic virus (CGMMV) infection

(2017) Xiaodong Li et al.   Scientific Reports

Extensive transcriptomic studies on the roles played by abscisic acid and auxins in the development and ripening of strawberry fruits

(2016) Laura Medina-Puche et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Interactions of ABA signaling core components (SlPYLs, SlPP2Cs, and SlSnRK2s) in tomato ( Solanum lycopersicon )

(2016) Pei Chen et al.   JOURNAL OF PLANT PHYSIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Characterization and expression analysis of cDNAs encoding abscisic acid 8′-hydroxylase during mulberry fruit maturation and under stress conditions

(2016) Yuxiang Cai et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Effects of exogenous abscisic acid on the expression of citrus fruit ripening-related genes and fruit ripening

(2016) Xiaohua Wang et al.   SCIENTIA HORTICULTURAE

The Jujube Genome Provides Insights into Genome Evolution and the Domestication of Sweetness/Acidity Taste in Fruit Trees

(2016) Jian Huang et al.   PLoS Genetics

Expression analysis of theDkNCED1,DkNCED2andDkCYP707A1genes that regulate homeostasis of abscisic acid during the maturation of persimmon fruit

(2016) Sheng-Li Zhao et al.   JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY

Comprehensive Analysis of ABA Effects on Ethylene Biosynthesis and Signaling during Tomato Fruit Ripening

(2016) Wangshu Mou et al.   PLoS One

Genome-Wide Identification of the Transcription Factors Involved in Citrus Fruit Ripening from the Transcriptomes of a Late-Ripening Sweet Orange Mutant and Its Wild Type

(2016) Juxun Wu et al.   PLoS One

Sucrose and ABA regulate starch biosynthesis in maize through a novel transcription factor, ZmEREB156

(2016) Huanhuan Huang et al.   Scientific Reports

SUCROSE NONFERMENTING1-RELATED PROTEIN KINASE2.6, an Ortholog of OPEN STOMATA1, Is a Negative Regulator of Strawberry Fruit Development and Ripening

(2015) Yu Han et al.   PLANT PHYSIOLOGY

Transcriptome profiling of postharvest strawberry fruit in response to exogenous auxin and abscisic acid

(2015) Jingxin Chen et al.   PLANTA

Transcriptomic Analysis Reveals Possible Influences of ABA on Secondary Metabolism of Pigments, Flavonoids and Antioxidants in Tomato Fruit during Ripening

(2015) Wangshu Mou et al.   PLoS One

Comparative Transcriptome Analysis Reveals the Influence of Abscisic Acid on the Metabolism of Pigments, Ascorbic Acid and Folic Acid during Strawberry Fruit Ripening

(2015) Dongdong Li et al.   PLoS One

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Overexpression of tomato SlNAC1transcription factor alters fruit pigmentation and softening

(2014) Nana Ma et al.   BMC PLANT BIOLOGY

The role of abscisic acid in fruit ripening and responses to abiotic stress

(2014) Ping Leng et al.   JOURNAL OF EXPERIMENTAL BOTANY

SlNCED1 and SlCYP707A2: key genes involved in ABA metabolism during tomato fruit ripening

(2014) Kai Ji et al.   JOURNAL OF EXPERIMENTAL BOTANY

‘Movers and shakers’ in the regulation of fruit ripening: a cross-dissection of climacteric versus non-climacteric fruit

(2014) Sam Cherian et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptional control of fleshy fruit development and ripening

(2014) Rumyana Karlova et al.   JOURNAL OF EXPERIMENTAL BOTANY

A novel rice C2H2-type zinc finger protein, ZFP36, is a key player involved in abscisic acid-induced antioxidant defence and oxidative stress tolerance in rice

(2014) Hong Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

SMART: recent updates, new developments and status in 2015

(2014) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Integrated Network Analysis Identifies Fight-Club Nodes as a Class of Hubs Encompassing Key Putative Switch Genes That Induce Major Transcriptome Reprogramming during Grapevine Development

(2014) Maria Concetta Palumbo et al.   PLANT CELL

Exogenous abscisic acid alleviates zinc uptake and accumulation inPopulus × canescensexposed to excess zinc

(2014) WEN-GUANG SHI et al.   PLANT CELL AND ENVIRONMENT

Fruit Development and Ripening

(2013) Graham B. Seymour et al.   Annual Review of Plant Biology

Comparative transcriptome analysis of tomato (Solanum lycopersicum) in response to exogenous abscisic acid

(2013) Yan Wang et al.   BMC GENOMICS

Transcriptome analysis of rice root heterosis by RNA-Seq

(2013) Rongrong Zhai et al.   BMC GENOMICS

The Jujube (Ziziphus Jujuba Mill.) Fruit: A Review of Current Knowledge of Fruit Composition and Health Benefits

(2013) Qing-Han Gao et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Berry ripening: recently heard through the grapevine

(2013) Nathalie Kuhn et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Role of ABA in the Maturation and Postharvest Life of a Nonclimacteric Sweet Cherry Fruit

(2013) Hao Luo et al.   JOURNAL OF PLANT GROWTH REGULATION

Changes in the abscisic acid levels and related gene expression during fruit development and ripening in bilberry (Vaccinium myrtillus L.)

(2013) Katja Karppinen et al.   PHYTOCHEMISTRY

The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes

(2013) P. Nicolas et al.   PLANT PHYSIOLOGY

The role of abscisic acid in regulating cucumber fruit development and ripening and its transcriptional regulation

(2013) Yanping Wang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Non-climacteric ripening in strawberry fruit is linked to ABA, FaNCED2 and FaCYP707A1

(2012) Kai Ji et al.   FUNCTIONAL PLANT BIOLOGY

The Citrus ABA signalosome: identification and transcriptional regulation during sweet orange fruit ripening and leaf dehydration

(2012) Paco Romero et al.   JOURNAL OF EXPERIMENTAL BOTANY

Hormonal changes during non-climacteric ripening in strawberry

(2012) G. M. Symons et al.   JOURNAL OF EXPERIMENTAL BOTANY

The expression profiling of the CsPYL, CsPP2C and CsSnRK2 gene families during fruit development and drought stress in cucumber

(2012) Yanping Wang et al.   JOURNAL OF PLANT PHYSIOLOGY

A Vacuolar  -Glucosidase Homolog That Possesses Glucose-Conjugated Abscisic Acid Hydrolyzing Activity Plays an Important Role in Osmotic Stress Responses in Arabidopsis

(2012) Z.-Y. Xu et al.   PLANT CELL

The bHLH transcription factor MdbHLH3 promotes anthocyanin accumulation and fruit colouration in response to low temperature in apples

(2012) XING-BIN XIE et al.   PLANT CELL AND ENVIRONMENT

Genetics and Control of Tomato Fruit Ripening and Quality Attributes

(2011) Harry J. Klee et al.   Annual Review of Genetics

Transcriptional regulation of SlPYL, SlPP2C, and SlSnRK2 gene families encoding ABA signal core components during tomato fruit development and drought stress

(2011) Liang Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

FaPYR1 is involved in strawberry fruit ripening

(2011) Ye-mao Chai et al.   JOURNAL OF EXPERIMENTAL BOTANY

Suppression of 9-cis-Epoxycarotenoid Dioxygenase, Which Encodes a Key Enzyme in Abscisic Acid Biosynthesis, Alters Fruit Texture in Transgenic Tomato

(2011) L. Sun et al.   PLANT PHYSIOLOGY

Abscisic Acid Plays an Important Role in the Regulation of Strawberry Fruit Ripening

(2011) Hai-Feng Jia et al.   PLANT PHYSIOLOGY

Reciprocity between abscisic acid and ethylene at the onset of berry ripening and after harvest

(2010) Liang Sun et al.   BMC PLANT BIOLOGY

Quantitative analysis of major plant hormones in crude plant extracts by high-performance liquid chromatography–mass spectrometry

(2010) Xiangqing Pan et al.   Nature Protocols

Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grape

(2010) Gregory A. Gambetta et al.   PLANTA

Ethylene production and ethylene effects on respiration rate of postharvest sugarbeet roots

(2010) Karen Klotz Fugate et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Abscisic acid stimulated ripening and gene expression in berry skins of the Cabernet Sauvignon grape

(2009) Kazuya Koyama et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Silencing Sl-EBF1 and Sl-EBF2 expression causes constitutive ethylene response phenotype, accelerated plant senescence, and fruit ripening in tomato

(2009) Y. Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

The role of ABA in triggering ethylene biosynthesis and ripening of tomato fruit

(2009) M. Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cloning and functional analysis of 9-cis-epoxycarotenoid dioxygenase (NCED) genes encoding a key enzyme during abscisic acid biosynthesis from peach and grape fruits

(2009) Mei Zhang et al.   JOURNAL OF PLANT PHYSIOLOGY

Protein Phosphatases 2C Regulate the Activation of the Snf1-Related Kinase OST1 by Abscisic Acid in Arabidopsis

(2009) F. Vlad et al.   PLANT CELL

A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize

(2009) BJÖRN USADEL et al.   PLANT CELL AND ENVIRONMENT

Modulation of drought resistance by the abscisic acid receptor PYL5 through inhibition of clade A PP2Cs

(2009) Julia Santiago et al.   PLANT JOURNAL

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Pectin methylesterase and polygalacturonase in the developing grape skin

(2008) Christelle Deytieux-Belleau et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY