Comparative transcriptome analysis of tomato (Solanum lycopersicum) in response to exogenous abscisic acid

Transcriptomic profiling of the salt-stress response in the wild recretohalophyte Reaumuria trigyna

(2013) Zhen-hua Dang et al.   BMC GENOMICS

Transcriptome profiling of cytokinin and auxin regulation in tomato root

(2013) Sarika Gupta et al.   JOURNAL OF EXPERIMENTAL BOTANY

ABA homeostasis and signaling involving multiple subcellular compartments and multiple receptors

(2013) Zheng-Yi Xu et al.   PLANT CELL REPORTS

The evolution, function, structure, and expression of the plant sHSPs

(2012) Elizabeth R. Waters   JOURNAL OF EXPERIMENTAL BOTANY

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Peroxiredoxins in Plants and Cyanobacteria

(2011) Karl-Josef Dietz   ANTIOXIDANTS & REDOX SIGNALING

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

Common and unique elements of the ABA-regulated transcriptome of Arabidopsis guard cells

(2011) Rui-Sheng Wang et al.   BMC GENOMICS

Analysis of Muscle and Ovary Transcriptome of Sus scrofa: Assembly, Annotation and Marker Discovery

(2011) Q. Nie et al.   DNA RESEARCH

Role of DREBs in regulation of abiotic stress responses in plants

(2011) C. Lata et al.   JOURNAL OF EXPERIMENTAL BOTANY

The roles of ABA in plant–pathogen interactions

(2011) Feng Yi Cao et al.   JOURNAL OF PLANT RESEARCH

ABA-mediated transcriptional regulation in response to osmotic stress in plants

(2011) Yasunari Fujita et al.   JOURNAL OF PLANT RESEARCH

Action of Natural Abscisic Acid Precursors and Catabolites on Abscisic Acid Receptor Complexes

(2011) M. Kepka et al.   PLANT PHYSIOLOGY

Abscisic acid enhances resistance to Alternaria solani in tomato seedlings

(2011) Weiwei Song et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Early transcriptomic changes induced by magnesium deficiency in Arabidopsis thaliana reveal the alteration of circadian clock gene expression in roots and the triggering of abscisic acid-responsive genes

(2010) Christian Hermans et al.   NEW PHYTOLOGIST

ABA perception and signalling

(2010) Agepati S. Raghavendra et al.   TRENDS IN PLANT SCIENCE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Comparative Analyses of Plant Transcription Factor Databases

(2009) Silvia Ramirez et al.   CURRENT GENOMICS

Expression analysis of nine rice heat shock protein genes under abiotic stresses and ABA treatment

(2009) Jie Zou et al.   JOURNAL OF PLANT PHYSIOLOGY

Cinnamyl alcohol dehydrogenases-C and D, key enzymes in lignin biosynthesis, play an essential role in disease resistance in Arabidopsis

(2009) MAURICE TRONCHET et al.   MOLECULAR PLANT PATHOLOGY

Stress-induced changes in theArabidopsis thalianatranscriptome analyzed using whole-genome tiling arrays

(2009) Georg Zeller et al.   PLANT JOURNAL

Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses

(2009) K. Nakashima et al.   PLANT PHYSIOLOGY

Drought and Abscisic Acid Effects on Aquaporin Content Translate into Changes in Hydraulic Conductivity and Leaf Growth Rate: A Trans-Scale Approach

(2009) B. Parent et al.   PLANT PHYSIOLOGY

Hormone (Dis)harmony Moulds Plant Health and Disease

(2009) M. R. Grant et al.   SCIENCE

The multifaceted role of ABA in disease resistance

(2009) Jurriaan Ton et al.   TRENDS IN PLANT SCIENCE

Abscisic Acid-mediated Epigenetic Processes in Plant Development and Stress Responses

(2008) Viswanathan Chinnusamy et al.   Journal of Integrative Plant Biology

Proteomics applied on plant abiotic stresses: Role of heat shock proteins (HSP)

(2008) Anna Maria Timperio et al.   Journal of Proteomics

Stem cell transcriptome profiling via massive-scale mRNA sequencing

(2008) Nicole Cloonan et al.   NATURE METHODS

Arabidopsis Transcriptome Analysis under Drought, Cold, High-Salinity and ABA Treatment Conditions using a Tiling Array

(2008) A. Matsui et al.   PLANT AND CELL PHYSIOLOGY

Antagonistic Interaction between Systemic Acquired Resistance and the Abscisic Acid-Mediated Abiotic Stress Response in Arabidopsis

(2008) M. Yasuda et al.   PLANT CELL

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE

Differential induction of phenylalanine ammonia-lyase gene expression in response to in vitro callus unions of Prunus spp.

(2007) Ana Pina et al.   JOURNAL OF PLANT PHYSIOLOGY