iRNAD: a computational tool for identifying D modification sites in RNA sequence
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Title
iRNAD: a computational tool for identifying D modification sites in RNA sequence
Authors
Keywords
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Journal
BIOINFORMATICS
Volume -, Issue -, Pages -
Publisher
Oxford University Press (OUP)
Online
2019-04-27
DOI
10.1093/bioinformatics/btz358
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- MODOMICS: a database of RNA modification pathways. 2017 update
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