Tracking temporal shifts in area, biomes, and pollinators in the radiation of Salvia (sages) across continents: leveraging anchored hybrid enrichment and targeted sequence data

Phylogeny and staminal evolution of Salvia (Lamiaceae, Nepetoideae) in East Asia

(2018) Guo-Xiong Hu et al.   ANNALS OF BOTANY

Macroevolutionary Patterns of Flowering Plant Speciation and Extinction

(2018) Jana C. Vamosi et al.   Annual Review of Plant Biology

Greater pollination generalization is not associated with reduced constraints on corolla shape in Antillean plants

(2018) Simon Joly et al.   EVOLUTION

Rethinking phylogenetic comparative methods

(2018) Josef C Uyeda et al.   SYSTEMATIC BIOLOGY

BAMM at the court of false equivalency: A response to Meyer and Wiens

(2018) Daniel L. Rabosky   EVOLUTION

The phylogeny and biogeography of Hakea (Proteaceae) reveals the role of biome shifts in a continental plant radiation

(2017) Marcel Cardillo et al.   EVOLUTION

Repeated evolution of vertebrate pollination syndromes in a recently diverged Andean plant clade

(2017) Laura P. Lagomarsino et al.   EVOLUTION

A pilot study applying the plant Anchored Hybrid Enrichment method to New World sages ( Salvia subgenus Calosphace ; Lamiaceae)

(2017) Itzi Fragoso-Martínez et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Time to split Salvia s.l. (Lamiaceae) – New insights from Old World Salvia phylogeny

(2017) Maria Will et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeny of the Neotropical sages (Salvia subg. Calosphace; Lamiaceae) and insights into pollinator and area shifts

(2017) Itzi Fragoso-Martínez et al.   PLANT SYSTEMATICS AND EVOLUTION

Hummingbird pollination and the diversification of angiosperms: an old and successful association in Gesneriaceae

(2017) Martha Liliana Serrano-Serrano et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Is BAMM Flawed? Theoretical and Practical Concerns in the Analysis of Multi-Rate Diversification Models

(2017) Daniel L. Rabosky et al.   SYSTEMATIC BIOLOGY

Salvia united: The greatest good for the greatest number

(2017) BryanT. Drew et al.   TAXON

A continuous morphological approach to study the evolution of pollen in a phylogenetic context: An example with the order Myrtales

(2017) Ricardo Kriebel et al.   PLoS One

Shape analysis of moss (Bryophyta) sporophytes: Insights into land plant evolution

(2016) Jeffrey P. Rose et al.   AMERICAN JOURNAL OF BOTANY

Visions of the past and dreams of the future in the Orient: the Irano-Turanian region from classical botany to evolutionary studies

(2016) Sara Manafzadeh et al.   BIOLOGICAL REVIEWS

Expanding anchored hybrid enrichment to resolve both deep and shallow relationships within the spider tree of life

(2016) Chris A. Hamilton et al.   BMC EVOLUTIONARY BIOLOGY

Biogeography of the cosmopolitan sedges (Cyperaceae) and the area-richness correlation in plants

(2016) Daniel Spalink et al.   JOURNAL OF BIOGEOGRAPHY

Bayesian estimation of the global biogeographical history of the Solanaceae

(2016) Julia Dupin et al.   JOURNAL OF BIOGEOGRAPHY

Mapping Phylogenetic Trees to Reveal Distinct Patterns of Evolution

(2016) Michelle Kendall et al.   MOLECULAR BIOLOGY AND EVOLUTION

Divergence times, historical biogeography, and shifts in speciation rates of Myrtales

(2016) Brent A. Berger et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Biogeography and diversification of Brassicales: A 103 million year tale

(2016) Warren M. Cardinal-McTeague et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Evolution of geographical place and niche space: Patterns of diversification in the North American sedge (Cyperaceae) flora

(2016) Daniel Spalink et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae)

(2016) Laura P. Lagomarsino et al.   NEW PHYTOLOGIST

Distinct Processes Drive Diversification in Different Clades of Gesneriaceae

(2016) Eric H. Roalson et al.   SYSTEMATIC BIOLOGY

Intercontinental disjunctions between eastern Asia and western North America in vascular plants highlight the biogeographic importance of the Bering land bridge from late Cretaceous to Neogene

(2016) Jun Wen et al.   Journal of Systematics and Evolution

Fast and accurate detection of evolutionary shifts in Ornstein-Uhlenbeck models

(2016) Mohammad Khabbazian et al.   Methods in Ecology and Evolution

Formation of the Isthmus of Panama

(2016) A. ODea et al.   Science Advances

Shifts in diversification rates linked to biogeographic movement into new areas: An example of a recent radiation in the Andes

(2015) Simon Uribe-Convers et al.   AMERICAN JOURNAL OF BOTANY

The Evolution of Regional Species Richness: The History of the Southern African Flora

(2015) H. Peter Linder et al.   Annual Review of Ecology Evolution and Systematics

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes

(2015) Siavash Mirarab et al.   BIOINFORMATICS

The temporal build-up of hummingbird/plant mutualisms in North America and temperate South America

(2015) Stefan Abrahamczyk et al.   BMC EVOLUTIONARY BIOLOGY

Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating

(2015) Fabien L Condamine et al.   BMC EVOLUTIONARY BIOLOGY

Estimating species diversity and distribution in the era of Big Data: to what extent can we trust public databases?

(2015) Carla Maldonado et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing

(2015) Richard O. Prum et al.   NATURE

Adaptive radiation versus ‘radiation’ and ‘explosive diversification’: why conceptual distinctions are fundamental to understanding evolution

(2015) Thomas J. Givnish   NEW PHYTOLOGIST

Biological evidence supports an early and complex emergence of the Isthmus of Panama

(2015) Christine D. Bacon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Orchid phylogenomics and multiple drivers of their extraordinary diversification

(2015) Thomas J. Givnish et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Middle Miocene closure of the Central American Seaway

(2015) C. Montes et al.   SCIENCE

Model Inadequacy and Mistaken Inferences of Trait-Dependent Speciation

(2015) Daniel L. Rabosky et al.   SYSTEMATIC BIOLOGY

Spiraling into History: A Molecular Phylogeny and Investigation of Biogeographic Origins and Floral Evolution for the Genus Costus

(2015) Shayla Salzman et al.   SYSTEMATIC BOTANY

Unravelling Species Relationships and Diversification within the Iconic California Floristic Province Sages (Salvia subgenus Audibertia, Lamiaceae)

(2015) Jay B. Walker et al.   SYSTEMATIC BOTANY

Towards a new classification of Salvia s.l.: (re)establishing the genus Pleudia Raf.

(2015) Maria WILL et al.   TURKISH JOURNAL OF BOTANY

Living on the edge: timing of Rand Flora disjunctions congruent with ongoing aridification in Africa

(2015) Lisa Pokorny et al.   Frontiers in Genetics

Flies as pollinators of melittophilous Salvia species (Lamiaceae)

(2014) F. Celep et al.   AMERICAN JOURNAL OF BOTANY

Reconciling Diversification: Random Pulse Models of Speciation and Extinction

(2014) Robert E. Ricklefs   AMERICAN NATURALIST

Why Africa matters: evolution of Old World Salvia (Lamiaceae) in Africa

(2014) Maria Will et al.   ANNALS OF BOTANY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

The role of the uplift of the Qinghai-Tibetan Plateau for the evolution of Tibetan biotas

(2014) Adrien Favre et al.   BIOLOGICAL REVIEWS

Molecular Phylogenetics and the Diversification of Hummingbirds

(2014) Jimmy A. McGuire et al.   CURRENT BIOLOGY

Disentangling the influence of climatic and geological changes on species radiations

(2014) H. Peter Linder et al.   JOURNAL OF BIOGEOGRAPHY

Functional distinctiveness of major plant lineages

(2014) William K. Cornwell et al.   JOURNAL OF ECOLOGY

The floral morphospace - a modern comparative approach to study angiosperm evolution

(2014) Marion Chartier et al.   NEW PHYTOLOGIST

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

(2014) Daniel L. Rabosky   PLoS One

Whole-genome analyses resolve early branches in the tree of life of modern birds

(2014) E. D. Jarvis et al.   SCIENCE

Paleogene events in Central Eurasia: their role in the flora and vegetation cover evolution, migration of phytochore boundaries, and climate changes

(2014) M. A. Akhmetiev et al.   STRATIGRAPHY AND GEOLOGICAL CORRELATION

The Unsolved Challenge to Phylogenetic Correlation Tests for Categorical Characters

(2014) Wayne P. Maddison et al.   SYSTEMATIC BIOLOGY

Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

(2014) Nicholas J. Matzke   SYSTEMATIC BIOLOGY

BAMMtools: an R package for the analysis of evolutionary dynamics on phylogenetic trees

(2014) Daniel L. Rabosky et al.   Methods in Ecology and Evolution

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Systematics, biogeography, and character evolution of Sparganium (Typhaceae): Diversification of a widespread, aquatic lineage

(2013) Joshua D. Sulman et al.   AMERICAN JOURNAL OF BOTANY

Biogeographic regions of North American mammals based on endemism

(2013) Tania Escalante et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

ORIGIN AND DIVERSIFICATION OF THE CALIFORNIA FLORA: RE-EXAMINING CLASSIC HYPOTHESES WITH MOLECULAR PHYLOGENIES

(2013) Lesley T. Lancaster et al.   EVOLUTION

Potential use of DNA barcoding for the identification of Salvia based on cpDNA and nrDNA sequences

(2013) Meng Wang et al.   GENE

A tale of migrations from east to west: the Irano-Turanian floristic region as a source of Mediterranean xerophytes

(2013) Sara Manafzadeh et al.   JOURNAL OF BIOGEOGRAPHY

Dispersal patterns in space and time: a case study of Apiaceae subfamily Apioideae

(2013) Łukasz Banasiak et al.   JOURNAL OF BIOGEOGRAPHY

Is it easy to move and easy to evolve? Evolutionary accessibility and adaptation

(2013) Erika J. Edwards et al.   JOURNAL OF EXPERIMENTAL BOTANY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Adaptive radiation, correlated and contingent evolution, and net species diversification in Bromeliaceae

(2013) Thomas J. Givnish et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Three keys to the radiation of angiosperms into freezing environments

(2013) Amy E. Zanne et al.   NATURE

Identifying Hidden Rate Changes in the Evolution of a Binary Morphological Character: The Evolution of Plant Habit in Campanulid Angiosperms

(2013) Jeremy M. Beaulieu et al.   SYSTEMATIC BIOLOGY

Phylogenetics, biogeography, and staminal evolution in the tribe Mentheae (Lamiaceae)

(2012) Bryan T. Drew et al.   AMERICAN JOURNAL OF BOTANY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

The venom-gland transcriptome of the eastern diamondback rattlesnake (Crotalus adamanteus)

(2012) Darin R Rokyta et al.   BMC GENOMICS

The South American radiation ofLepechinia(Lamiaceae): phylogenetics, divergence times and evolution of dioecy

(2012) Bryan T. Drew et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Testing geological models of evolution of the Isthmus of Panama in a phylogenetic framework

(2012) Christine D. Bacon et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Climatic determinism in phytogeographic regionalization: A test from the Irano-Turanian region, SW and Central Asia

(2012) Morteza Djamali et al.   FLORA

Evidence for middle Eocene and younger land emergence in central Panama: Implications for Isthmus closure

(2012) C. Montes et al.   GEOLOGICAL SOCIETY OF AMERICA BULLETIN

Phylogeny of New World Salvia subgenus Calosphace (Lamiaceae) based on cpDNA (psbA-trnH) and nrDNA (ITS) sequence data

(2012) Aaron A. Jenks et al.   JOURNAL OF PLANT RESEARCH

Accurate Model Selection of Relaxed Molecular Clocks in Bayesian Phylogenetics

(2012) Guy Baele et al.   MOLECULAR BIOLOGY AND EVOLUTION

Multiple Continental Radiations and Correlates of Diversification in Lupinus (Leguminosae): Testing for Key Innovation with Incomplete Taxon Sampling

(2012) Christopher S. Drummond et al.   SYSTEMATIC BIOLOGY

High-Throughput Identification of Informative Nuclear Loci for Shallow-Scale Phylogenetics and Phylogeography

(2012) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics

(2012) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Building the Zagros collisional orogen: Timing, strain distribution and the dynamics of Arabia/Eurasia plate convergence

(2012) F. Mouthereau et al.   TECTONOPHYSICS

Phylogenetic evidence for pollinator-driven diversification of angiosperms

(2012) Timotheüs van der Niet et al.   TRENDS IN ECOLOGY & EVOLUTION

Phylogenetic relationships ofSalvia(Lamiaceae) in China: Evidence from DNA sequence datasets

(2012) Qian-Quan LI et al.   Journal of Systematics and Evolution

Pollination Syndromes of New WorldSalviaSpecies with Special Reference to Bird Pollination1

(2011) Petra Wester et al.   ANNALS OF THE MISSOURI BOTANICAL GARDEN

Evolution of Grasses and Grassland Ecosystems

(2011) Caroline A.E. Strömberg   Annual Review of Earth and Planetary Sciences

Testing the Monophyly and Placement of Lepechinia in the Tribe Mentheae (Lamiaceae)

(2011) Bryan T. Drew et al.   SYSTEMATIC BOTANY

phytools: an R package for phylogenetic comparative biology (and other things)

(2011) Liam J. Revell   Methods in Ecology and Evolution

Episodic migration of oaks to Iceland: Evidence for a North Atlantic “land bridge” in the latest Miocene

(2010) Thomas Denk et al.   AMERICAN JOURNAL OF BOTANY

Fundamental biogeographic patterns across the Mexican Transition Zone: an evolutionary approach

(2010) Juan J. Morrone   ECOGRAPHY

Magmatic history and evolution of the Central American Land Bridge in Panama since Cretaceous times

(2010) W. Wegner et al.   GEOLOGICAL SOCIETY OF AMERICA BULLETIN

An evaluation of new parsimony-based versus parametric inference methods in biogeography: a case study using the globally distributed plant family Sapindaceae

(2010) Sven Buerki et al.   JOURNAL OF BIOGEOGRAPHY

Phylogenetic relationships among subgenera, species, and varieties of Japanese Salvia L. (Lamiaceae)

(2010) Atsuko Takano et al.   JOURNAL OF PLANT RESEARCH

Using phylogenetics to detect pollinator-mediated floral evolution

(2010) Stacey DeWitt Smith   NEW PHYTOLOGIST

The Origins of C4 Grasslands: Integrating Evolutionary and Ecosystem Science

(2010) E. J. Edwards et al.   SCIENCE

Cabbage family affairs: the evolutionary history of Brassicaceae

(2010) Andreas Franzke et al.   TRENDS IN PLANT SCIENCE

The Role of Animal Pollination in Plant Speciation: Integrating Ecology, Geography, and Genetics

(2009) Kathleen M. Kay et al.   Annual Review of Ecology Evolution and Systematics

THE BIOLOGY OF SPECIATION

(2009) James M. Sobel et al.   EVOLUTION

Evolution, origin and age of lineages in the Californian and Mediterranean floras

(2009) David D. Ackerly   JOURNAL OF BIOGEOGRAPHY

Phylogenetic biome conservatism on a global scale

(2009) Michael D. Crisp et al.   NATURE

Evolution of the Madrean-Tethyan disjunctions and the North and South American amphitropical disjunctions in plants

(2009) Jun WEN et al.   Journal of Systematics and Evolution

Phylogeography, Fossils, and Northern Hemisphere Biogeography: The Role of Physiological Uniformitarianism1

(2008) Bruce H. Tiffney   ANNALS OF THE MISSOURI BOTANICAL GARDEN

IS FLORAL SPECIALIZATION AN EVOLUTIONARY DEAD-END POLLINATION SYSTEM TRANSITIONS INRUELLIA(ACANTHACEAE)

(2008) Erin A. Tripp et al.   EVOLUTION

Origin and diversification of the Greater Cape flora: Ancient species repository, hot-bed of recent radiation, or both?

(2008) G. Anthony Verboom et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Maximum Likelihood Inference of Geographic Range Evolution by Dispersal, Local Extinction, and Cladogenesis

(2008) Richard H. Ree et al.   SYSTEMATIC BIOLOGY