Shape analysis of moss (Bryophyta) sporophytes: Insights into land plant evolution

Coleochaete and the origin of sporophytes

(2015) David Haig   AMERICAN JOURNAL OF BOTANY

DNA microsatellite analysis of sporophytes of the short-lived mossPhyscomitrium pyriformereveals a predominantly self-fertilizing mating pattern

(2015) Robert A. Klips   BRYOLOGIST

Confluence, synnovation, and depauperons in plant diversification

(2015) Michael J. Donoghue et al.   NEW PHYTOLOGIST

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes

(2014) Brad R Ruhfel et al.   BMC EVOLUTIONARY BIOLOGY

Release thresholds for moss spores: the importance of turbulence and sporophyte length

(2014) Victor Johansson et al.   JOURNAL OF ECOLOGY

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

(2014) Daniel L. Rabosky   PLoS One

Conflicting Phylogenies for Early Land Plants are Caused by Composition Biases among Synonymous Substitutions

(2014) Cymon J. Cox et al.   SYSTEMATIC BIOLOGY

Extant diversity of bryophytes emerged from successive post-Mesozoic diversification bursts

(2014) B. Laenen et al.   Nature Communications

Moss diversity: A molecular phylogenetic analysis of genera

(2014) C. J. Cox et al.   Phytotaxa

Land plant evolutionary timeline: Gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates

(2013) Susana Magallón et al.   AMERICAN JOURNAL OF BOTANY

The evolutionary-developmental origins of multicellularity

(2013) K. J. Niklas   AMERICAN JOURNAL OF BOTANY

Phylogenetic relationships and character evolution analysis of Saxifragales using a supermatrix approach

(2013) D. E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Filial mistletoes: the functional morphology of moss sporophytes

(2013) David Haig   ANNALS OF BOTANY

Patterns of clade support across the major lineages of moss phylogeny

(2013) Ying Chang et al.   CLADISTICS

Early evolution of the vascular plant body plan — the missing mechanisms

(2013) Alexandru MF Tomescu et al.   CURRENT OPINION IN PLANT BIOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

How colorful are fruits? Limited color diversity in fleshy fruits on local and global scales

(2013) Kalliope E. Stournaras et al.   NEW PHYTOLOGIST

Filtering across Spatial Scales: Phylogeny, Biogeography and Community Structure in Bumble Bees

(2013) Alexandra N. Harmon-Threatt et al.   PLoS One

Exceptional Convergence on the Macroevolutionary Landscape in Island Lizard Radiations

(2013) D. L. Mahler et al.   SCIENCE

Geometric Morphometric Character Suites as Phylogenetic Data: Extracting Phylogenetic Signal from Gastropod Shells

(2013) Ursula E. Smith et al.   SYSTEMATIC BIOLOGY

The origin of the sporophyte shoot in land plants: a bryological perspective

(2012) Roberto Ligrone et al.   ANNALS OF BOTANY

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Impact of Missing Data on Phylogenies Inferred from Empirical Phylogenomic Data Sets

(2012) Béatrice Roure et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Highly Incomplete Taxa Can Rescue Phylogenetic Analyses from the Negative Impacts of Limited Taxon Sampling

(2012) John J. Wiens et al.   PLoS One

Phylogeny-Based Comparative Methods Question the Adaptive Nature of Sporophytic Specializations in Mosses

(2012) Sanna Huttunen et al.   PLoS One

Using Supermatrices for Phylogenetic Inquiry: An Example Using the Sedges

(2012) Cody E. Hinchliff et al.   SYSTEMATIC BIOLOGY

Evolution of the life cycle in land plants

(2012) Yin-Long QIU et al.   Journal of Systematics and Evolution

Diversification of land plants: insights from a family-level phylogenetic analysis

(2011) Omar Fiz-Palacios et al.   BMC EVOLUTIONARY BIOLOGY

Developmental plasticity, morphological variation and evolvability: a multilevel analysis of morphometric integration in the shape of compound leaves

(2011) C. P. KLINGENBERG et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Establishing a time-scale for plant evolution

(2011) John T. Clarke et al.   NEW PHYTOLOGIST

phytools: an R package for phylogenetic comparative biology (and other things)

(2011) Liam J. Revell   Methods in Ecology and Evolution

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Introducing Intron Locus cox1i624 for Phylogenetic Analyses in Bryophytes: On the Issue of Takakia as Sister Genus to All Other Extant Mosses

(2010) Ute Volkmar et al.   JOURNAL OF MOLECULAR EVOLUTION

Testing and Quantifying Phylogenetic Signals and Homoplasy in Morphometric Data

(2010) Christian Peter Klingenberg et al.   SYSTEMATIC BIOLOGY

The evolution of the land plant life cycle

(2009) Karl J. Niklas et al.   NEW PHYTOLOGIST

Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates

(2009) M. E. Alfaro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Slow molecular evolution in 18S rDNA, rbcL and nad5 genes of mosses compared with higher plants

(2008) H. K. STENØIEN   JOURNAL OF EVOLUTIONARY BIOLOGY

Morphometrics of the Avian Small Intestine Compared with That of Nonflying Mammals: A Phylogenetic Approach

(2008) Shana R. Lavin et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY