DNA Methylation Patterns in the Social Spider, Stegodyphus dumicola

Dnmt1 is essential for egg production and embryo viability in the large milkweed bug, Oncopeltus fasciatus

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The DNA Methylation Landscape of Stickleback Reveals Patterns of Sex Chromosome Evolution and Effects of Environmental Salinity

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Clonal genome evolution and rapid invasive spread of the marbled crayfish

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Pattern of DNA Methylation in Daphnia: Evolutionary Perspective

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The methylome of the marbled crayfish links gene body methylation to stable expression of poorly accessible genes

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Evolution of sociality in spiders leads to depleted genomic diversity at both population and species levels

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(2017) Frank Lyko   NATURE REVIEWS GENETICS

20 years of the SMART protein domain annotation resource

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Persistent and plastic effects of temperature on DNA methylation across the genome of threespine stickleback ( Gasterosteus aculeatus )

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The spider tree of life: phylogeny of Araneae based on target-gene analyses from an extensive taxon sampling

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Evolution of DNA Methylation across Insects

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Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

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On the origin and evolutionary consequences of gene body DNA methylation

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Mechanism and biological role of Dnmt2 in Nucleic Acid Methylation

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Phylogenetic analysis suggests that sociality is associated with reduced effectiveness of selection

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DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies

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The caste- and sex-specific DNA methylome of the termite Zootermopsis nevadensis

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BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

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Evolutionary Transition of Promoter and Gene Body DNA Methylation across Invertebrate–Vertebrate Boundary

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

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HISAT: a fast spliced aligner with low memory requirements

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Low genetic diversity and strong but shallow population differentiation suggests genetic homogenization by metapopulation dynamics in a social spider

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Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

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Spider genomes provide insight into composition and evolution of venom and silk

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Whole-Genome DNA Methylation Profile of the Jewel Wasp ( Nasonia vitripennis )

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The Role of Methylation of DNA in Environmental Adaptation

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Gene body methylation is conserved between plant orthologs and is of evolutionary consequence

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Exploiting sparseness in de novo genome assembly

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Genome-wide and Caste-Specific DNA Methylomes of the Ants Camponotus floridanus and Harpegnathos saltator

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The Evolution of Invertebrate Gene Body Methylation

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DNA Methylation and Its Basic Function

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‘Leveling’ the playing field for analyses of single-base resolution DNA methylomes

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Revisiting an Old Riddle: What Determines Genetic Diversity Levels within Species?

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Comparative Analyses of DNA Methylation and Sequence Evolution Using Nasonia Genomes

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The genome of Tetranychus urticae reveals herbivorous pest adaptations

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Beyond DNA: integrating inclusive inheritance into an extended theory of evolution

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On the Evolutionary Origin of Eukaryotic DNA Methyltransferases and Dnmt2

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Evolution of Eukaryotic DNA Methylation and the Pursuit of Safer Sex

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Single base–resolution methylome of the silkworm reveals a sparse epigenomic map

(2010) Hui Xiang et al.   NATURE BIOTECHNOLOGY

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

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Fast and accurate short read alignment with Burrows-Wheeler transform

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DNA methylation in early development

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Using native and syntenically mapped cDNA alignments to improve de novo gene finding

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Production of different phenotypes from the same genotype in the same environment by developmental variation

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DNA methylation landscapes: provocative insights from epigenomics

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Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis

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