Adaptive Introgression: An Untapped Evolutionary Mechanism for Crop Adaptation
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Title
Adaptive Introgression: An Untapped Evolutionary Mechanism for Crop Adaptation
Authors
Keywords
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Journal
Frontiers in Plant Science
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2019-02-01
DOI
10.3389/fpls.2019.00004
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Note: Only part of the references are listed.- Adaptive introgression: a plant perspective
- (2018) Adriana Suarez-Gonzalez et al. Biology Letters
- Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep
- (2018) Christina Marie Rochus et al. BMC GENOMICS
- Wild crop relative populations hot-spots of diversity are hot-spots of introgression in the case of pearl millet
- (2018) Aichatou Assoumane et al. GENETIC RESOURCES AND CROP EVOLUTION
- Scale and direction of adaptive introgression between black cottonwood (Populus trichocarpa ) and balsam poplar (P. balsamifera )
- (2018) Adriana Suarez-Gonzalez et al. MOLECULAR ECOLOGY
- Targeted resequencing reveals genomic signatures of barley domestication
- (2018) Artem Pankin et al. NEW PHYTOLOGIST
- Molecular diversity and landscape genomics of the crop wild relative Triticum urartu across the Fertile Crescent
- (2018) Alice Brunazzi et al. PLANT JOURNAL
- Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares
- (2018) Matthew R. Jones et al. SCIENCE
- Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation
- (2018) Eric J.B. von Wettberg et al. Nature Communications
- Increase in crop losses to insect pests in a warming climate
- (2018) Curtis A. Deutsch et al. SCIENCE
- A western Sahara centre of domestication inferred from pearl millet genomes
- (2018) Concetta Burgarella et al. Nature Ecology & Evolution
- The Unreasonable Effectiveness of Convolutional Neural Networks in Population Genetic Inference
- (2018) Lex Flagel et al. MOLECULAR BIOLOGY AND EVOLUTION
- Deleterious variation shapes the genomic landscape of introgression
- (2018) Bernard Y. Kim et al. PLoS Genetics
- Misconceptions Regarding the Role of Introgression in the Origin of Oryza sativa subsp. indica
- (2018) Peter Civáň et al. Frontiers in Plant Science
- Signatures of Selection and Interspecies Introgression in the Genome of Chinese Domestic Pigs
- (2017) Yaling Zhu et al. Genome Biology and Evolution
- Reduced representation genome sequencing reveals patterns of genetic diversity and selection in apple
- (2017) Baiquan Ma et al. Journal of Integrative Plant Biology
- The rice paradox: Multiple origins but single domestication in Asian rice
- (2017) Jae Young Choi et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolution of novel mimicry rings facilitated by adaptive introgression in tropical butterflies
- (2017) Juan Enciso-Romero et al. MOLECULAR ECOLOGY
- Signatures of local adaptation in lowland and highland teosintes from whole-genome sequencing of pooled samples
- (2017) M.-A. Fustier et al. MOLECULAR ECOLOGY
- Genome diversity of tuber-bearingSolanumuncovers complex evolutionary history and targets of domestication in the cultivated potato
- (2017) Michael A. Hardigan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Adaptive Genetic Exchange: A Tangled History of Admixture and Evolutionary Innovation
- (2017) Michael L. Arnold et al. TRENDS IN ECOLOGY & EVOLUTION
- Fine scale mapping of genomic introgressions within the Drosophila yakuba clade
- (2017) David A. Turissini et al. PLoS Genetics
- A survey of methods and tools to detect recent and strong positive selection
- (2017) Pavlos Pavlidis et al. Journal of Biological Research-Thessaloniki
- Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors
- (2016) Michael Dannemann et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Genomic Signatures of Selective Pressures and Introgression from Archaic Hominins at Human Innate Immunity Genes
- (2016) Matthieu Deschamps et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Evolution and Adaptation of Wild Emmer Wheat Populations to Biotic and Abiotic Stresses
- (2016) Lin Huang et al. Annual Review of Phytopathology
- Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations
- (2016) Hélène Quach et al. CELL
- Archaic Hominin Admixture Facilitated Adaptation to Out-of-Africa Environments
- (2016) Rachel M. Gittelman et al. CURRENT BIOLOGY
- Evolutionary and social consequences of introgression of nontransgenic herbicide resistance from rice to weedy rice in Brazil
- (2016) Aldo Merotto et al. Evolutionary Applications
- Hybridization and extinction
- (2016) Marco Todesco et al. Evolutionary Applications
- Admixture, Population Structure, and F-Statistics
- (2016) B. M. Peter GENETICS
- Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies
- (2016) PingHsun Hsieh et al. GENOME RESEARCH
- Global environmental change effects on ecosystems: the importance of land-use legacies
- (2016) Michael P. Perring et al. GLOBAL CHANGE BIOLOGY
- Signatures of Archaic Adaptive Introgression in Present-Day Human Populations
- (2016) Fernando Racimo et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomic Analysis Reveals Hypoxia Adaptation in the Tibetan Mastiff by Introgression of the Grey Wolf from the Tibetan Plateau
- (2016) Benpeng Miao et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome scan reveals selection acting on genes linked to stress response in wild pearl millet
- (2016) Cécile Berthouly-Salazar et al. MOLECULAR ECOLOGY
- Detecting hybridization using ancient DNA
- (2016) Nathan K. Schaefer et al. MOLECULAR ECOLOGY
- Admixture mapping identifies introgressed genomic regions in North American canids
- (2016) Bridgett M. vonHoldt et al. MOLECULAR ECOLOGY
- Genomic and functional approaches reveal a case of adaptive introgression fromPopulus balsamifera(balsam poplar) inP. trichocarpa(black cottonwood)
- (2016) Adriana Suarez-Gonzalez et al. MOLECULAR ECOLOGY
- Borrowed alleles and convergence in serpentine adaptation
- (2016) Brian J. Arnold et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals
- (2016) B. Vernot et al. SCIENCE
- Timescales of transformational climate change adaptation in sub-Saharan African agriculture
- (2016) Ulrike Rippke et al. Nature Climate Change
- Strong Selection at MHC in Mexicans since Admixture
- (2016) Quan Zhou et al. PLoS Genetics
- The Accumulation of Deleterious Mutations as a Consequence of Domestication and Improvement in Sunflowers and Other Compositae Crops
- (2015) Sebastien Renaut et al. MOLECULAR BIOLOGY AND EVOLUTION
- Quantitative trait locus mapping identifies candidate alleles involved in adaptive introgression and range expansion in a wild sunflower
- (2015) Kenneth D. Whitney et al. MOLECULAR ECOLOGY
- Adaptation and possible ancient interspecies introgression in pigs identified by whole-genome sequencing
- (2015) Huashui Ai et al. NATURE GENETICS
- Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes
- (2015) Laurent A F Frantz et al. NATURE GENETICS
- Evidence for archaic adaptive introgression in humans
- (2015) Fernando Racimo et al. NATURE REVIEWS GENETICS
- Domestication footprints anchor genomic regions of agronomic importance in soybeans
- (2015) Yingpeng Han et al. NEW PHYTOLOGIST
- Adaptive introgression in an African malaria mosquito coincident with the increased usage of insecticide-treated bed nets
- (2015) Laura C. Norris et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs
- (2015) Clare D. Marsden et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- European Flint Landraces Grown In Situ Reveal Adaptive Introgression from Modern Maize
- (2015) Elena Bitocchi et al. PLoS One
- Consequence of altered nitrogen cycles in the coupled human and ecological system under changing climate: The need for long-term and site-based research
- (2014) Hideaki Shibata et al. AMBIO
- Is gene flow the most important evolutionary force in plants?
- (2014) Norman C. Ellstrand AMERICAN JOURNAL OF BOTANY
- Back to the wilds: Tapping evolutionary adaptations for resilient crops through systematic hybridization with crop wild relatives
- (2014) Emily Warschefsky et al. AMERICAN JOURNAL OF BOTANY
- Detecting Structure of Haplotypes and Local Ancestry
- (2014) Y. Guan GENETICS
- Evaluating the Use of ABBA–BABA Statistics to Locate Introgressed Loci
- (2014) Simon H. Martin et al. MOLECULAR BIOLOGY AND EVOLUTION
- Sequential adaptive introgression of the mitochondrial genome inDrosophila yakubaandDrosophila santomea
- (2014) Ana Llopart et al. MOLECULAR ECOLOGY
- Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
- (2014) Tami E. Cruickshank et al. MOLECULAR ECOLOGY
- Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA
- (2014) Emilia Huerta-Sánchez et al. NATURE
- The genomic landscape of Neanderthal ancestry in present-day humans
- (2014) Sriram Sankararaman et al. NATURE
- Olive domestication and diversification in the Mediterranean Basin
- (2014) Concepcion M. Diez et al. NEW PHYTOLOGIST
- Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean
- (2014) E. Bellucci et al. PLANT CELL
- Interspecific introgressive origin of genomic diversity in the house mouse
- (2014) Kevin J. Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Prehistoric genomes reveal the genetic foundation and cost of horse domestication
- (2014) Mikkel Schubert et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Thinking too positive? Revisiting current methods of population genetic selection inference
- (2014) Claudia Bank et al. TRENDS IN GENETICS
- Admixture facilitates genetic adaptations to high altitude in Tibet
- (2014) Choongwon Jeong et al. Nature Communications
- Hypoxia Adaptations in the Grey Wolf (Canis lupus chanco) from Qinghai-Tibet Plateau
- (2014) Wenping Zhang et al. PLoS Genetics
- Inferring ancestry from population genomic data and its applications
- (2014) Badri Padhukasahasram Frontiers in Genetics
- Introgression of Crop Alleles into Wild or Weedy Populations
- (2013) Norman C. Ellstrand et al. Annual Review of Ecology Evolution and Systematics
- Assisted Gene Flow to Facilitate Local Adaptation to Climate Change
- (2013) Sally N. Aitken et al. Annual Review of Ecology Evolution and Systematics
- Assessing climate change impacts on sorghum and millet yields in the Sudanian and Sahelian savannas of West Africa
- (2013) B Sultan et al. Environmental Research Letters
- Hybridization and speciation
- (2013) R. Abbott et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing
- (2013) Paul A. Hohenlohe et al. MOLECULAR ECOLOGY
- Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation
- (2013) Philip W. Hedrick MOLECULAR ECOLOGY
- Evolution of crop species: genetics of domestication and diversification
- (2013) Rachel S. Meyer et al. NATURE REVIEWS GENETICS
- Climate Change Impacts on Global Food Security
- (2013) T. Wheeler et al. SCIENCE
- The Genomic Signature of Crop-Wild Introgression in Maize
- (2013) Matthew B. Hufford et al. PLoS Genetics
- A Haplotype at STAT2 Introgressed from Neanderthals and Serves as a Candidate of Positive Selection in Papua New Guinea
- (2012) Fernando L. Mendez et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Climate change impacts on crop productivity in Africa and South Asia
- (2012) Jerry Knox et al. Environmental Research Letters
- Ancient Admixture in Human History
- (2012) N. Patterson et al. GENETICS
- Recent Progress in Polymorphism-Based Population Genetic Inference
- (2012) Jessica L. Crisci et al. JOURNAL OF HEREDITY
- A Bayesian analysis of gene flow from crops to their wild relatives: cultivated (Lactuca sativaL.) and prickly lettuce (L. serriolaL.) and the recent expansion ofL. serriolain Europe
- (2012) BRIGITTE UWIMANA et al. MOLECULAR ECOLOGY
- Reconstructing Native American population history
- (2012) David Reich et al. NATURE
- A map of rice genome variation reveals the origin of cultivated rice
- (2012) Xuehui Huang et al. NATURE
- Patterns and processes in crop domestication: an historical review and quantitative analysis of 203 global food crops
- (2012) Rachel S. Meyer et al. NEW PHYTOLOGIST
- Reproductive Isolation during Domestication
- (2012) H. Dempewolf et al. PLANT CELL
- Construction of Chromosome Segment Substitution Lines in Peanut (Arachis hypogaea L.) Using a Wild Synthetic and QTL Mapping for Plant Morphology
- (2012) Daniel Fonceka et al. PLoS One
- New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties
- (2012) Amandine Cornille et al. PLoS Genetics
- Adaptive Introgression across Species Boundaries in Heliconius Butterflies
- (2012) Carolina Pardo-Diaz et al. PLoS Genetics
- Genome Patterns of Selection and Introgression of Haplotypes in Natural Populations of the House Mouse (Mus musculus)
- (2012) Fabian Staubach et al. PLoS Genetics
- Adaptive Introgression of Anticoagulant Rodent Poison Resistance by Hybridization between Old World Mice
- (2011) Ying Song et al. CURRENT BIOLOGY
- Testing for Ancient Admixture between Closely Related Populations
- (2011) Eric Y. Durand et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genetic structure and domestication history of the grape
- (2011) Sean Myles et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Shaping of Modern Human Immune Systems by Multiregional Admixture with Archaic Humans
- (2011) L. Abi-Rached et al. SCIENCE
- Climate Trends and Global Crop Production Since 1980
- (2011) D. B. Lobell et al. SCIENCE
- A walk on the wild side
- (2011) Luigi Guarino et al. Nature Climate Change
- Repeated Adaptive Introgression at a Gene under Multiallelic Balancing Selection
- (2011) Vincent Castric et al. PLoS Genetics
- Divergence with Gene Flow: Models and Data
- (2010) Catarina Pinho et al. Annual Review of Ecology Evolution and Systematics
- Robust negative impacts of climate change on African agriculture
- (2010) Wolfram Schlenker et al. Environmental Research Letters
- Field, Genetic, and Modeling Approaches Show Strong Positive Selection Acting upon an Insecticide Resistance Mutation in Anopheles gambiae s.s.
- (2010) A. Lynd et al. MOLECULAR BIOLOGY AND EVOLUTION
- Adaptive introgression of abiotic tolerance traits in the sunflower Helianthus annuus
- (2010) Kenneth D. Whitney et al. NEW PHYTOLOGIST
- Association Mapping of Insecticide Resistance in Wild Anopheles gambiae Populations: Major Variants Identified in a Low-Linkage Disequilbrium Genome
- (2010) David Weetman et al. PLoS One
- A Draft Sequence of the Neandertal Genome
- (2010) R. E. Green et al. SCIENCE
- Genetic perspectives on crop domestication
- (2010) Briana L. Gross et al. TRENDS IN PLANT SCIENCE
- A weed-crop complex in sorghum: The dynamics of genetic diversity in a traditional farming system
- (2009) Adeline Barnaud et al. AMERICAN JOURNAL OF BOTANY
- Genetic load and transgenic mitigating genes in transgenic Brassica rapa (field mustard) × Brassica napus (oilseed rape) hybrid populations
- (2009) Christy W Rose et al. BMC BIOTECHNOLOGY
- Rapid fixation of non-native alleles revealed by genome-wide SNP analysis of hybrid tiger salamanders
- (2009) Benjamin M Fitzpatrick et al. BMC EVOLUTIONARY BIOLOGY
- Fast model-based estimation of ancestry in unrelated individuals
- (2009) D. H. Alexander et al. GENOME RESEARCH
- Shifts in African crop climates by 2050, and the implications for crop improvement and genetic resources conservation
- (2009) Marshall B. Burke et al. GLOBAL ENVIRONMENTAL CHANGE-HUMAN AND POLICY DIMENSIONS
- Genetic markers in the playground of multivariate analysis
- (2009) T Jombart et al. HEREDITY
- Conservation Genetics and North American Bison (Bison bison)
- (2009) P. W. Hedrick JOURNAL OF HEREDITY
- Natural selection influences AFLP intraspecific genetic variability and introgression patterns in Atlantic eels
- (2009) P. A. GAGNAIRE et al. MOLECULAR ECOLOGY
- Reconstructing Indian population history
- (2009) David Reich et al. NATURE
- A comparative view of the evolution of grasses under domestication
- (2009) Sylvain Glémin et al. NEW PHYTOLOGIST
- Food security: contributions from science to a new and greener revolution
- (2009) J. Beddington PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The origin and evolution of fragrance in rice (Oryza sativa L.)
- (2009) M. J. Kovach et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetic Properties of the Maize Nested Association Mapping Population
- (2009) M. D. McMullen et al. SCIENCE
- Molecular and Evolutionary History of Melanism in North American Gray Wolves
- (2009) T. M. Anderson et al. SCIENCE
- The Genomics of Speciation in Drosophila: Diversity, Divergence, and Introgression Estimated Using Low-Coverage Genome Sequencing
- (2009) Rob J. Kulathinal et al. PLoS Genetics
- Molecular insights into the evolution of crop plants
- (2008) Jutta C. Burger et al. AMERICAN JOURNAL OF BOTANY
- From mutations to MAGIC: resources for gene discovery, validation and delivery in crop plants
- (2008) Colin Cavanagh et al. CURRENT OPINION IN PLANT BIOLOGY
- The genetic expectations of a protracted model for the origins of domesticated crops
- (2008) R. G. Allaby et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Regulatory Genes Control a Key Morphological and Ecological Trait Transferred Between Species
- (2008) M. Kim et al. SCIENCE
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