Evolution of crop species: genetics of domestication and diversification

Genetic structure and domestication of carrot (Daucus carota subsp. sativus) (Apiaceae)

(2013) M. Iorizzo et al.   AMERICAN JOURNAL OF BOTANY

A Bountiful Harvest: Genomic Insights into Crop Domestication Phenotypes

(2013) Kenneth M. Olsen et al.   Annual Review of Plant Biology

Assessment of Genetic Diversity in Peruvian Amaranth ( and ) Germplasm using Single Nucleotide Polymorphism Markers

(2013) Felix R. Jimenez et al.   CROP SCIENCE

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica)

(2013) Guanqing Jia et al.   NATURE GENETICS

OsLG1 regulates a closed panicle trait in domesticated rice

(2013) Takashige Ishii et al.   NATURE GENETICS

Genetic Control and Comparative Genomic Analysis of Flowering Time in Setaria (Poaceae)

(2013) Margarita Mauro-Herrera et al.   G3-Genes Genomes Genetics

Population-based resequencing analysis of wild and cultivated barley revealed weak domestication signal of selection and bottleneck in the Rrs2 scald resistance gene region

(2012) Yong-Bi Fu   GENOME

Genic and nongenic contributions to natural variation of quantitative traits in maize

(2012) X. Li et al.   GENOME RESEARCH

The Genetic Architecture of Flowering Time and Photoperiod Sensitivity in Maize as Revealed by QTL Review and Meta Analysis

(2012) Jie Xu et al.   Journal of Integrative Plant Biology

Deletion commonly found in Waxy gene of Japanese and Korean cultivars of Job’s tears (Coix lacryma-jobi L.)

(2012) Takehiro Hachiken et al.   MOLECULAR BREEDING

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

Comparative population genomics of maize domestication and improvement

(2012) Matthew B Hufford et al.   NATURE GENETICS

Parallel domestication of the Shattering1 genes in cereals

(2012) Zhongwei Lin et al.   NATURE GENETICS

Patterns and processes in crop domestication: an historical review and quantitative analysis of 203 global food crops

(2012) Rachel S. Meyer et al.   NEW PHYTOLOGIST

SHAT1, A New Player in Seed Shattering of Rice

(2012) N. R. Hofmann   PLANT CELL

Reproductive Isolation during Domestication

(2012) H. Dempewolf et al.   PLANT CELL

Genetic Control of Seed Shattering in Rice by the APETALA2 Transcription Factor SHATTERING ABORTION1

(2012) Y. Zhou et al.   PLANT CELL

Construction of a Genetic Linkage Map and Genetic Analysis of Domestication Related Traits in Mungbean (Vigna radiata)

(2012) Takehisa Isemura et al.   PLoS One

Variation Revealed by SNP Genotyping and Morphology Provides Insight into the Origin of the Tomato

(2012) Jose Blanca et al.   PLoS One

Molecular genetic basis of pod corn (Tunicate maize)

(2012) L. U. Wingen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Preceramic maize from Paredones and Huaca Prieta, Peru

(2012) A. Grobman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The common bean growth habit gene PvTFL1y is a functional homolog of Arabidopsis TFL1

(2012) S. L. Repinski et al.   THEORETICAL AND APPLIED GENETICS

New Insight into the History of Domesticated Apple: Secondary Contribution of the European Wild Apple to the Genome of Cultivated Varieties

(2012) Amandine Cornille et al.   PLoS Genetics

From forest to field: Perennial fruit crop domestication

(2011) Allison J. Miller et al.   AMERICAN JOURNAL OF BOTANY

Angiosperm phylogeny: 17 genes, 640 taxa

(2011) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Origin of waxy common millet, Panicum miliaceum L. in Japan

(2011) Mie Araki et al.   GENETIC RESOURCES AND CROP EVOLUTION

Early agricultural pathways: moving outside the ‘core area’ hypothesis in Southwest Asia

(2011) Dorian Q. Fuller et al.   JOURNAL OF EXPERIMENTAL BOTANY

The molecular basis of mutations at the Waxy locus from Amaranthus caudatus L.: evolution of the waxy phenotype in three species of grain amaranth

(2011) Young-Jun Park et al.   MOLECULAR BREEDING

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

(2011) Xun Xu et al.   NATURE BIOTECHNOLOGY

INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1

(2011) Luke Ramsay et al.   NATURE GENETICS

Identification of a functional transposon insertion in the maize domestication gene tb1

(2011) Anthony Studer et al.   NATURE GENETICS

Distribution of SUN, OVATE, LC, and FAS in the Tomato Germplasm and the Relationship to Fruit Shape Diversity

(2011) G. R. Rodriguez et al.   PLANT PHYSIOLOGY

Cereal Domestication and Evolution of Branching: Evidence for Soft Selection in the Tb1 Orthologue of Pearl Millet (Pennisetum glaucum [L.] R. Br.)

(2011) Marie-Stanislas Remigereau et al.   PLoS One

Molecular evidence for a single evolutionary origin of domesticated rice

(2011) J. Molina et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Artificial selection for a green revolution gene during japonica rice domestication

(2011) K. Asano et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

ARCHAEOLOGICAL DATA REVEAL SLOW RATES OF EVOLUTION DURING PLANT DOMESTICATION

(2010) Michael D. Purugganan et al.   EVOLUTION

Parallel Adaptation: One or Many Waves of Advance of an Advantageous Allele?

(2010) P. Ralph et al.   GENETICS

The molecular basis of white pericarps in African domesticated rice: novel mutations at the Rc gene

(2010) B. L. GROSS et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Molecular Basis of the Waxy Endosperm Starch Phenotype in Broomcorn Millet (Panicum miliaceum L.)

(2010) H. V. Hunt et al.   MOLECULAR BIOLOGY AND EVOLUTION

Seeing red: the origin of grain pigmentation in US weedy rice

(2010) BRIANA L. GROSS et al.   MOLECULAR ECOLOGY

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

The nature of selection during plant domestication

(2009) Michael D. Purugganan et al.   NATURE

The origin and evolution of fragrance in rice (Oryza sativa L.)

(2009) M. J. Kovach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Starch grain and phytolith evidence for early ninth millennium B.P. maize from the Central Balsas River Valley, Mexico

(2009) D. R. Piperno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogeographic Evidence of Crop Neodiversity in Sorghum

(2008) L. F. de Alencar Figueiredo et al.   GENETICS

Detecting Local Adaptation Using the Joint Sampling of Polymorphism Data in the Parental and Derived Populations

(2008) H. Innan et al.   GENETICS

The Genetic Architecture of Complex Traits in Teosinte (Zea mays ssp. parviglumis): New Evidence From Association Mapping

(2008) A. L. Weber et al.   GENETICS

Population-Based Resequencing Reveals That the Flowering Time Adaptation of Cultivated Barley Originated East of the Fertile Crescent

(2008) H. Jones et al.   MOLECULAR BIOLOGY AND EVOLUTION

Control of a key transition from prostrate to erect growth in rice domestication

(2008) Lubin Tan et al.   NATURE GENETICS

Genetic control of rice plant architecture under domestication

(2008) Jian Jin et al.   NATURE GENETICS

Genetic approaches to crop improvement: responding to environmental and population changes

(2008) Shin Takeda et al.   NATURE REVIEWS GENETICS

Inference of the japonica Rice Domestication Process from the Distribution of Six Functional Nucleotide Polymorphisms of Domestication-Related Genes in Various Landraces and Modern Cultivars

(2008) Saeko Konishi et al.   PLANT AND CELL PHYSIOLOGY

A natural mutation in rc reverts white-rice-pericarp to red and results in a new, dominant, wild-type allele: Rc-g

(2008) Steven A. Brooks et al.   THEORETICAL AND APPLIED GENETICS