Diversified secondary metabolite biosynthesis gene repertoire revealed in symbiotic dinoflagellates
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Title
Diversified secondary metabolite biosynthesis gene repertoire revealed in symbiotic dinoflagellates
Authors
Keywords
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Journal
Scientific Reports
Volume 9, Issue 1, Pages -
Publisher
Springer Nature
Online
2019-02-04
DOI
10.1038/s41598-018-37792-0
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- (2017) Gurjeet S. Kohli et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Both modular and single-domain Type I polyketide synthases are expressed in the brevetoxin-producing dinoflagellate, Karenia brevis (Dinophyceae)
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- (2017) Kai Blin et al. NUCLEIC ACIDS RESEARCH
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- (2016) M. Aranda et al. Scientific Reports
- Multimodular type I polyketide synthases in algae evolve by module duplications and displacement of AT domains in trans
- (2015) Ekaterina Shelest et al. BMC GENOMICS
- Multifunctional polyketide synthase genes identified by genomic survey of the symbiotic dinoflagellate, Symbiodinium minutum
- (2015) Girish Beedessee et al. BMC GENOMICS
- Endosymbiosis undone by stepwise elimination of the plastid in a parasitic dinoflagellate
- (2015) Sebastian G. Gornik et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis
- (2015) S. Lin et al. SCIENCE
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- (2014) H. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
- (2014) Patrick J. Keeling et al. PLOS BIOLOGY
- Horizontal Gene Transfer is a Significant Driver of Gene Innovation in Dinoflagellates
- (2013) Jennifer H. Wisecaver et al. Genome Biology and Evolution
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- (2013) Barzan I. Khayatt et al. PLoS One
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- (2013) Jean Colcombet et al. RNA Biology
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- (2012) Tovah Salcedo et al. MOLECULAR BIOLOGY AND EVOLUTION
- Fiji: an open-source platform for biological-image analysis
- (2012) Johannes Schindelin et al. NATURE METHODS
- The Natural Product Domain Seeker NaPDoS: A Phylogeny Based Bioinformatic Tool to Classify Secondary Metabolite Gene Diversity
- (2012) Nadine Ziemert et al. PLoS One
- Putative Monofunctional Type I Polyketide Synthase Units: A Dinoflagellate-Specific Feature?
- (2012) Karsten Eichholz et al. PLoS One
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- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
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- SyMAP v3.4: a turnkey synteny system with application to plant genomes
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- The Pfam protein families database
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- (2010) Emily A. Monroe et al. JOURNAL OF PHYCOLOGY
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- (2010) Benjamin R. Gordon et al. Marine Drugs
- Biosynthesis and Molecular Genetics of Polyketides in Marine Dinoflagellates
- (2010) Ralf Kellmann et al. Marine Drugs
- Combined Transcript and Metabolite Profiling of Arabidopsis Grown under Widely Variant Growth Conditions Facilitates the Identification of Novel Metabolite-Mediated Regulation of Gene Expression
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- (2009) Christian Hertweck ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
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- (2008) TuAnh Nguyen et al. NATURE BIOTECHNOLOGY
- The evolution of gene collectives: How natural selection drives chemical innovation
- (2008) M. A. Fischbach et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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