Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing mouse spinal cord

Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types

(2018) Martin Häring et al.   NATURE NEUROSCIENCE

Graded Arrays of Spinal and Supraspinal V2a Interneuron Subtypes Underlie Forelimb and Hindlimb Motor Control

(2018) Marito Hayashi et al.   NEURON

Origin and Segmental Diversity of Spinal Inhibitory Interneurons

(2018) Lora B. Sweeney et al.   NEURON

Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

(2018) Alexander B. Rosenberg et al.   SCIENCE

Massively Parallel Single Nucleus Transcriptional Profiling Defines Spinal Cord Neurons and Their Activity during Behavior

(2018) Anupama Sathyamurthy et al.   Cell Reports

Olig2 and Hes regulatory dynamics during motor neuron differentiation revealed by single cell transcriptomics

(2018) Andreas Sagner et al.   PLOS BIOLOGY

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain

(2018) Arpiar Saunders et al.   CELL

Molecular Architecture of the Mouse Nervous System

(2018) Amit Zeisel et al.   CELL

Subtype Diversification and Synaptic Specificity of Stem Cell-Derived Spinal Interneurons

(2018) Phuong T. Hoang et al.   NEURON

Neuronal specification in space and time

(2018) Isabel Holguera et al.   SCIENCE

Glia-specific enhancers and chromatin structure regulate NFIA expression and glioma tumorigenesis

(2017) Stacey M Glasgow et al.   NATURE NEUROSCIENCE

Mouse embryonic stem cells can differentiate via multiple paths to the same state

(2017) James Alexander Briggs et al.   eLife

Bayesian Sparse Regression Analysis Documents the Diversity of Spinal Inhibitory Interneurons

(2016) Mariano I. Gabitto et al.   CELL

Spinal Inhibitory Interneuron Diversity Delineates Variant Motor Microcircuits

(2016) Jay B. Bikoff et al.   CELL

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics

(2016) Karthik Shekhar et al.   CELL

Making sense out of spinal cord somatosensory development

(2016) Helen C. Lai et al.   DEVELOPMENT

Neural Progenitors Adopt Specific Identities by Directly Repressing All Alternative Progenitor Transcriptional Programs

(2016) Eva Kutejova et al.   DEVELOPMENTAL CELL

Wishbone identifies bifurcating developmental trajectories from single-cell data

(2016) Manu Setty et al.   NATURE BIOTECHNOLOGY

Decoding the organization of spinal circuits that control locomotion

(2016) Ole Kiehn   NATURE REVIEWS NEUROSCIENCE

Parallel Pbx -Dependent Pathways Govern the Coalescence and Fate of Motor Columns

(2016) Olivia Hanley et al.   NEURON

Hox Proteins Coordinate Motor Neuron Differentiation and Connectivity Programs through Ret/Gfrα Genes

(2016) Catarina Catela et al.   Cell Reports

Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis

(2015) Jaehoon Shin et al.   Cell Stem Cell

Morphogen rules: design principles of gradient-mediated embryo patterning

(2015) J. Briscoe et al.   DEVELOPMENT

A direct fate exclusion mechanism by Sonic hedgehog-regulated transcriptional repressors

(2015) Yuichi Nishi et al.   DEVELOPMENT

Developmental Pattern Formation in Phases

(2015) Anna Kicheva et al.   TRENDS IN CELL BIOLOGY

Molecular and cellular development of spinal cord locomotor circuitry

(2015) Daniel C. Lu et al.   Frontiers in Molecular Neuroscience

Neurogenin3 Restricts Serotonergic Neuron Differentiation to the Hindbrain

(2014) A. L. Carcagno et al.   JOURNAL OF NEUROSCIENCE

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

(2014) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Tgfβ Signaling Regulates Temporal Neurogenesis and Potency of Neural Stem Cells in the CNS

(2014) José M. Dias et al.   NEURON

Coordination of progenitor specification and growth in mouse and chick spinal cord

(2014) A. Kicheva et al.   SCIENCE

Motor neurons and the generation of spinal motor neuron diversity

(2014) Nicolas Stifani   Frontiers in Cellular Neuroscience

Generating spinal motor neuron diversity: a long quest for neuronal identity

(2013) Cédric Francius et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Functional Subpopulations of V3 Interneurons in the Mature Mouse Spinal Cord

(2013) J. Borowska et al.   JOURNAL OF NEUROSCIENCE

Locomotor Rhythm Generation Linked to the Output of Spinal Shox2 Excitatory Interneurons

(2013) Kimberly J. Dougherty et al.   NEURON

Hox Genes: Choreographers in Neural Development, Architects of Circuit Organization

(2013) Polyxeni Philippidou et al.   NEURON

Identification of Multiple Subsets of Ventral Interneurons and Differential Distribution along the Rostrocaudal Axis of the Developing Spinal Cord

(2013) Cédric Francius et al.   PLoS One

Onecut transcription factors act upstream of Isl1 to regulate spinal motoneuron diversification

(2012) A. Roy et al.   DEVELOPMENT

Dorsal-ventral patterning of the neural tube: A tale of three signals

(2012) Gwenvael Le Dréau et al.   Developmental Neurobiology

Sox9 and NFIA Coordinate a Transcriptional Regulatory Cascade during the Initiation of Gliogenesis

(2012) Peng Kang et al.   NEURON

Motor Neuron Position and Topographic Order Imposed by β- and γ-Catenin Activities

(2011) Elena Y. Demireva et al.   CELL

SnapShot: Spinal Cord Development

(2011) William A. Alaynick et al.   CELL

Renshaw cell interneuron specialization is controlled by a temporally restricted transcription factor program

(2011) F. J. Stam et al.   DEVELOPMENT

Expression of delta-protocadherins in the spinal cord of the chicken embryo

(2011) Juntang Lin et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Motor antagonism exposed by spatial segregation and timing of neurogenesis

(2011) Marco Tripodi et al.   NATURE

Trans-Synaptic Interaction of GluRδ2 and Neurexin through Cbln1 Mediates Synapse Formation in the Cerebellum

(2010) Takeshi Uemura et al.   CELL

Neuronal Regulation of the Spatial Patterning of Neurogenesis

(2010) Rosa Gonzalez-Quevedo et al.   DEVELOPMENTAL CELL

Globally optimal stitching of tiled 3D microscopic image acquisitions

(2009) S. Preibisch et al.   BIOINFORMATICS

Circuits controlling vertebrate locomotion: moving in a new direction

(2009) Martyn Goulding   NATURE REVIEWS NEUROSCIENCE

Characterization of Foxp2-expressing cells in the developing spinal cord

(2009) Y. Morikawa et al.   NEUROSCIENCE

Hox Repertoires for Motor Neuron Diversity and Connectivity Gated by a Single Accessory Factor, FoxP1

(2008) Jeremy S. Dasen et al.   CELL

Coordinated Actions of the Forkhead Protein Foxp1 and Hox Proteins in the Columnar Organization of Spinal Motor Neurons

(2008) David L. Rousso et al.   NEURON