Proteomic profiling and integrated analysis with transcriptomic data bring new insights in the stress responses of Kluyveromyces marxianus after an arrest during high-temperature ethanol fermentation

Ethanol stress responses of Kluyveromyces marxianus CCT 7735 revealed by proteomic and metabolomic analyses

(2019) Mariana Caroline Tocantins Alvim et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

RNA-Seq-based transcriptomic analysis of Saccharomyces cerevisiae during solid-state fermentation of crushed sweet sorghum stalks

(2018) Xiaofen Fu et al.   PROCESS BIOCHEMISTRY

Transcriptomic analysis of thermotolerant yeast Kluyveromyces marxianus in multiple inhibitors tolerance

(2018) Dongmei Wang et al.   RSC Advances

Engineering TATA-binding protein Spt15 to improve ethanol tolerance and production in Kluyveromyces marxianus

(2018) Pengsong Li et al.   Biotechnology for Biofuels

The Gene Ontology Resource: 20 years and still GOing strong

(2018)   NUCLEIC ACIDS RESEARCH

CRISPR/Cas-based screening of a gene activation library in Saccharomyces cerevisiae identifies a crucial role of OLE1 in thermotolerance

(2018) Pengsong Li et al.   Microbial Biotechnology

Reduced ultrafine particle levels in São Paulo’s atmosphere during shifts from gasoline to ethanol use

(2017) Alberto Salvo et al.   Nature Communications

Biodegradation Mechanisms of Patulin in Candida guilliermondii: An iTRAQ-Based Proteomic Analysis

(2017) Yong Chen et al.   Toxins

RNA-Seq-based transcriptomic and metabolomic analysis reveal stress responses and programmed cell death induced by acetic acid in Saccharomyces cerevisiae

(2017) Yachen Dong et al.   Scientific Reports

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Transcriptional analysis of Kluyveromyces marxianus for ethanol production from inulin using consolidated bioprocessing technology

(2015) Jiaoqi Gao et al.   Biotechnology for Biofuels

Correlation between ethanol stress and cellular fatty acid composition of alcohol producing non-Saccharomyces in comparison with Saccharomyces cerevisiae by multivariate techniques

(2015) K. M. Archana et al.   JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE

Understanding the Mechanism of Thermotolerance Distinct From Heat Shock Response Through Proteomic Analysis of Industrial Strains ofSaccharomyces cerevisiae

(2015) Wenqing Shui et al.   MOLECULAR & CELLULAR PROTEOMICS

Proteomic analysis reveals complex metabolic regulation in Saccharomyces cerevisiae cells against multiple inhibitors stress

(2014) Ya-Jin Lv et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High temperature stimulates acetic acid accumulation and enhances the growth inhibition and ethanol production by Saccharomyces cerevisiae under fermenting conditions

(2014) Ji-Min Woo et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Physiological characterization of thermotolerant yeast for cellulosic ethanol production

(2014) Daniela A. Costa et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Regulation of protein turnover by heat shock proteins

(2014) Perinur Bozaykut et al.   FREE RADICAL BIOLOGY AND MEDICINE

IQuant: An automated pipeline for quantitative proteomics based upon isobaric tags

(2014) Bo Wen et al.   PROTEOMICS

Leveraging the complementary nature of RNA-Seq and shotgun proteomics data

(2014) Xiaojing Wang et al.   PROTEOMICS

Enzymatic hydrolysis at high-solids loadings for the conversion of agave bagasse to fuel ethanol

(2013) Luis Caspeta et al.   APPLIED ENERGY

A novel cost-effective technology to convert sucrose and homocelluloses in sweet sorghum stalks into ethanol

(2013) Jihong Li et al.   Biotechnology for Biofuels

Protein rescue from aggregates by powerful molecular chaperone machines

(2013) Shannon M. Doyle et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Stress Responsive Proteins Are Actively Regulated during Rice (Oryza sativa) Embryogenesis as Indicated by Quantitative Proteomics Analysis

(2013) Jin Zi et al.   PLoS One

Comparative Proteomics Analysis of Engineered Saccharomyces cerevisiae with Enhanced Biofuel Precursor Production

(2013) Xiaoling Tang et al.   PLoS One

Effect of ethanol–gasoline blend on NOx emission in SI engine

(2013) B.M. Masum et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

A cross-platform toolkit for mass spectrometry and proteomics

(2012) Matthew C Chambers et al.   NATURE BIOTECHNOLOGY

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

(2012) Christine Vogel et al.   NATURE REVIEWS GENETICS

Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast

(2012) Daniel H Lackner et al.   GENOME BIOLOGY

The Response to Heat Shock and Oxidative Stress in Saccharomyces cerevisiae

(2011) K. A. Morano et al.   GENETICS

Transcriptome to proteome and back to genome

(2011) Mary Muers   NATURE REVIEWS GENETICS

Transcriptional Responses of Saccharomyces cerevisiae to Shift from Respiratory and Respirofermentative to Fully Fermentative Metabolism

(2011) Eija Rintala et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Total fatty acid content of the plasma membrane of Saccharomyces cerevisiae is more responsible for ethanol tolerance than the degree of unsaturation

(2010) Hyun-Soo Kim et al.   BIOTECHNOLOGY LETTERS

The role of protein quality control in mitochondrial protein homeostasis under oxidative stress

(2010) Tom Bender et al.   PROTEOMICS

High-temperature fermentation: how can processes for ethanol production at high temperatures become superior to the traditional process using mesophilic yeast?

(2009) Babiker M. A. Abdel-Banat et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The fungal glutathione S-transferase system. Evidence of new classes in the wood-degrading basidiomycete Phanerochaete chrysosporium

(2009) Mélanie Morel et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Accurate and Sensitive Peptide Identification with Mascot Percolator

(2009) Markus Brosch et al.   JOURNAL OF PROTEOME RESEARCH

Temporal quantitative proteomics of Saccharomyces cerevisiae in response to a nonlethal concentration of furfural

(2009) Feng-Ming Lin et al.   PROTEOMICS

A proteomic and transcriptomic view of amino acids catabolism in the yeastYarrowia lipolytica

(2009) Soulaf Mansour et al.   PROTEOMICS

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

(2008) Lyris M. F. de Godoy et al.   NATURE

Reactive oxygen species regulate DNA copy number in isolated yeast mitochondria by triggering recombination-mediated replication

(2008) Akiko Hori et al.   NUCLEIC ACIDS RESEARCH