Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome
Authors
Keywords
-
Journal
eLife
Volume 7, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2018-08-06
DOI
10.7554/elife.35720
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The ATPase motor of the Chd1 chromatin remodeler stimulates DNA unwrapping from the nucleosome
- (2018) Joshua M Tokuda et al. NUCLEIC ACIDS RESEARCH
- Structural basis for ATP-dependent chromatin remodelling by the INO80 complex
- (2018) Sebastian Eustermann et al. NATURE
- Structure and regulation of the human INO80–nucleosome complex
- (2018) Rafael Ayala et al. NATURE
- Interdomain Communication of the Chd1 Chromatin Remodeler across the DNA Gyres of the Nucleosome
- (2017) Ilana M. Nodelman et al. MOLECULAR CELL
- The Chd1 Chromatin Remodeler Shifts Nucleosomal DNA Bidirectionally as a Monomer
- (2017) Yupeng Qiu et al. MOLECULAR CELL
- Mechanism of chromatin remodelling revealed by the Snf2-nucleosome structure
- (2017) Xiaoyu Liu et al. NATURE
- Nucleosome–Chd1 structure and implications for chromatin remodelling
- (2017) Lucas Farnung et al. NATURE
- MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy
- (2017) Shawn Q Zheng et al. NATURE METHODS
- Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes
- (2017) Cedric R. Clapier et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- PHF1 Tudor and N-terminal domains synergistically target partially unwrapped nucleosomes to increase DNA accessibility
- (2017) Matthew D. Gibson et al. NUCLEIC ACIDS RESEARCH
- The ATP-dependent chromatin remodeler Chd1 is recruited by transcription elongation factors and maintains H3K4me3/H3K36me3 domains at actively transcribed and spliced genes
- (2017) Yaelim Lee et al. NUCLEIC ACIDS RESEARCH
- Accessibility of the histone H3 tail in the nucleosome for binding of paired readers
- (2017) Jovylyn Gatchalian et al. Nature Communications
- Crosstalk within a functional INO80 complex dimer regulates nucleosome sliding
- (2017) Oliver Willhoft et al. eLife
- Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes
- (2017) Ramasubramanian Sundaramoorthy et al. eLife
- Genomic Nucleosome Organization Reconstituted with Pure Proteins
- (2016) Nils Krietenstein et al. CELL
- Recognition of the nucleosome by chromatin factors and enzymes
- (2016) Robert K McGinty et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Gctf: Real-time CTF determination and correction
- (2016) Kai Zhang JOURNAL OF STRUCTURAL BIOLOGY
- Structure and regulation of the chromatin remodeller ISWI
- (2016) Lijuan Yan et al. NATURE
- Genome-wide nucleosome specificity and function of chromatin remodellers in ES cells
- (2016) Maud de Dieuleveult et al. NATURE
- The structural basis of modified nucleosome recognition by 53BP1
- (2016) Marcus D. Wilson et al. NATURE
- Ubiquitin utilizes an acidic surface patch to alter chromatin structure
- (2016) Galia T Debelouchina et al. Nature Chemical Biology
- The histone chaperone Vps75 forms multiple oligomeric assemblies capable of mediating exchange between histone H3–H4 tetramers and Asf1–H3–H4 complexes
- (2016) Colin M. Hammond et al. NUCLEIC ACIDS RESEARCH
- The ISW1 and CHD1 ATP-dependent chromatin remodelers compete to set nucleosome spacingin vivo
- (2016) Josefina Ocampo et al. NUCLEIC ACIDS RESEARCH
- Structural basis for histone H2B deubiquitination by the SAGA DUB module
- (2016) M. T. Morgan et al. SCIENCE
- Structural and biochemical analyses of monoubiquitinated human histones H2B and H4
- (2016) Shinichi Machida et al. Open Biology
- The Chd1 chromatin remodeler shifts hexasomes unidirectionally
- (2016) Robert F Levendosky et al. eLife
- Asymmetric Unwrapping of Nucleosomes under Tension Directed by DNA Local Flexibility
- (2015) Thuy T.M. Ngo et al. CELL
- A Nucleotide-Driven Switch Regulates Flanking DNA Length Sensing by a Dimeric Chromatin Remodeler
- (2015) John D. Leonard et al. MOLECULAR CELL
- Quantitative analysis of single-molecule force spectroscopy on folded chromatin fibers
- (2015) He Meng et al. NUCLEIC ACIDS RESEARCH
- The chromatin remodelers RSC and ISW1 display functional and chromatin-based promoter antagonism
- (2015) Timothy J Parnell et al. eLife
- Flexibility in crosstalk between H2B ubiquitination and H3 methylation in vivo
- (2014) H. Vlaming et al. EMBO REPORTS
- The SAGA coactivator complex acts on the whole transcribed genome and is required for RNA polymerase II transcription
- (2014) Jacques Bonnet et al. GENES & DEVELOPMENT
- Generation of nonhydrolyzable ubiquitin–histone mimics
- (2014) Lindsey Long et al. METHODS
- Crystal structure of the PRC1 ubiquitylation module bound to the nucleosome
- (2014) Robert K. McGinty et al. NATURE
- H2B Mono-ubiquitylation Facilitates Fork Stalling and Recovery during Replication Stress by Coordinating Rad53 Activation and Chromatin Assembly
- (2014) Chia-Yeh Lin et al. PLoS Genetics
- Mechanisms and Functions of ATP-Dependent Chromatin-Remodeling Enzymes
- (2013) Geeta J. Narlikar et al. CELL
- ISWI Remodelers Slide Nucleosomes with Coordinated Multi-Base-Pair Entry Steps and Single-Base-Pair Exit Steps
- (2013) Sebastian Deindl et al. CELL
- Systematic Identification of Proteins Binding to Chromatin-Embedded Ubiquitylated H2B Reveals Recruitment of SWI/SNF to Regulate Transcription
- (2013) Efrat Shema-Yaacoby et al. Cell Reports
- ATP-dependent chromatin assembly is functionally distinct from chromatin remodeling
- (2013) Sharon E Torigoe et al. eLife
- Low-resolution refinement tools inREFMAC5
- (2012) Robert A. Nicholls et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- CHD1 remodelers regulate nucleosome spacingin vitroand align nucleosomal arrays over gene coding regions inS. pombe
- (2012) Julia Pointner et al. EMBO JOURNAL
- Chd1 chromatin remodelers maintain nucleosome organization and repress cryptic transcription
- (2012) Bianca P Hennig et al. EMBO REPORTS
- Codependency of H2B monoubiquitination and nucleosome reassembly on Chd1
- (2012) J.-S. Lee et al. GENES & DEVELOPMENT
- DAXX envelops a histone H3.3–H4 dimer for H3.3-specific recognition
- (2012) Simon J. Elsässer et al. NATURE
- Structure of the variant histone H3.3–H4 heterodimer in complex with its chaperone DAXX
- (2012) Chao-Pei Liu et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange
- (2012) Michaela Smolle et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The mechanics behind DNA sequence-dependent properties of the nucleosome
- (2012) Eugene Y. D. Chua et al. NUCLEIC ACIDS RESEARCH
- A Key Role for Chd1 in Histone H3 Dynamics at the 3′ Ends of Long Genes in Yeast
- (2012) Marta Radman-Livaja et al. PLoS Genetics
- The RSC chromatin remodelling ATPase translocates DNA with high force and small step size
- (2011) George Sirinakis et al. EMBO JOURNAL
- The DNA-binding domain of the Chd1 chromatin-remodelling enzyme contains SANT and SLIDE domains
- (2011) Daniel P Ryan et al. EMBO JOURNAL
- Splitting the task: Ubp8 and Ubp10 deubiquitinate different cellular pools of H2BK123
- (2011) J. M. Schulze et al. GENES & DEVELOPMENT
- Genome-wide function of H2B ubiquitylation in promoter and genic regions
- (2011) K. Batta et al. GENES & DEVELOPMENT
- Crystal Structure of the Chromodomain Helicase DNA-binding Protein 1 (Chd1) DNA-binding Domain in Complex with DNA
- (2011) Amit Sharma et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A Bayesian View on Cryo-EM Structure Determination
- (2011) Sjors H.W. Scheres JOURNAL OF MOLECULAR BIOLOGY
- Extranucleosomal DNA Binding Directs Nucleosome Sliding by Chd1
- (2011) J. N. McKnight et al. MOLECULAR AND CELLULAR BIOLOGY
- Regulation of Homologous Recombination by RNF20-Dependent H2B Ubiquitination
- (2011) Kyosuke Nakamura et al. MOLECULAR CELL
- Requirement of ATM-Dependent Monoubiquitylation of Histone H2B for Timely Repair of DNA Double-Strand Breaks
- (2011) Lilach Moyal et al. MOLECULAR CELL
- Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP
- (2011) Petra Wollmann et al. NATURE
- Histone H2B ubiquitylation disrupts local and higher-order chromatin compaction
- (2011) Beat Fierz et al. Nature Chemical Biology
- Structural Basis of Silencing: Sir3 BAH Domain in Complex with a Nucleosome at 3.0 A Resolution
- (2011) K.-J. Armache et al. SCIENCE
- A Role for Snf2-Related Nucleosome-Spacing Enzymes in Genome-Wide Nucleosome Organization
- (2011) T. Gkikopoulos et al. SCIENCE
- The Chromodomains of the Chd1 Chromatin Remodeler Regulate DNA Access to the ATPase Motor
- (2010) Glenn Hauk et al. MOLECULAR CELL
- Structure of RCC1 chromatin factor bound to the nucleosome core particle
- (2010) Ravindra D. Makde et al. NATURE
- Uniform transitions of the general RNA polymerase II transcription complex
- (2010) Andreas Mayer et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanism
- (2010) M. Gu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Role of Nucleosome Positioning in the Evolution of Gene Regulation
- (2010) Alexander M. Tsankov et al. PLOS BIOLOGY
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes
- (2009) Lisa R. Racki et al. NATURE
- Dynamics of nucleosome remodelling by individual ACF complexes
- (2009) Timothy R. Blosser et al. NATURE
- High-resolution dynamic mapping of histone-DNA interactions in a nucleosome
- (2009) Michael A Hall et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- H2B Ubiquitylation Plays a Role in Nucleosome Dynamics during Transcription Elongation
- (2008) Alastair B. Fleming et al. MOLECULAR CELL
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started