OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume 43, Issue D1, Pages D250-D256
Publisher
Oxford University Press (OUP)
Online
2014-11-27
DOI
10.1093/nar/gku1220
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Big data and other challenges in the quest for orthologs
- (2014) E. L. L. Sonnhammer et al. BIOINFORMATICS
- Comprehensive Human Virus Screening Using High-Throughput Sequencing with a User-Friendly Representation of Bioinformatics Analysis: a Pilot Study
- (2014) Tom J. Petty et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Activities at the Universal Protein Resource (UniProt)
- (2014) NUCLEIC ACIDS RESEARCH
- Quickly Finding Orthologs as Reciprocal Best Hits with BLAT, LAST, and UBLAST: How Much Do We Miss?
- (2014) Natalie Ward et al. PLoS One
- DBM-DB: the diamondback moth genome database
- (2014) W. Tang et al. Database-The Journal of Biological Databases and Curation
- The i5K Initiative: Advancing Arthropod Genomics for Knowledge, Human Health, Agriculture, and the Environment
- (2013) JOURNAL OF HEREDITY
- Functional and evolutionary implications of gene orthology
- (2013) Toni Gabaldón et al. NATURE REVIEWS GENETICS
- WormBase 2014: new views of curated biology
- (2013) Todd W. Harris et al. NUCLEIC ACIDS RESEARCH
- The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse
- (2013) Judith A. Blake et al. NUCLEIC ACIDS RESEARCH
- Database resources of the National Center for Biotechnology Information
- (2013) NUCLEIC ACIDS RESEARCH
- Saccharomycesgenome database provides new regulation data
- (2013) Maria C. Costanzo et al. NUCLEIC ACIDS RESEARCH
- eggNOG v4.0: nested orthology inference across 3686 organisms
- (2013) Sean Powell et al. NUCLEIC ACIDS RESEARCH
- Ensembl Genomes 2013: scaling up access to genome-wide data
- (2013) Paul Julian Kersey et al. NUCLEIC ACIDS RESEARCH
- FlyBase 102—advanced approaches to interrogating FlyBase
- (2013) Susan E. St. Pierre et al. NUCLEIC ACIDS RESEARCH
- The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
- (2013) Henrik Nordberg et al. NUCLEIC ACIDS RESEARCH
- DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.
- (2013) Hao Luo et al. NUCLEIC ACIDS RESEARCH
- Ensembl 2014
- (2013) Paul Flicek et al. NUCLEIC ACIDS RESEARCH
- EcoGene 3.0
- (2012) Jindan Zhou et al. NUCLEIC ACIDS RESEARCH
- ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics
- (2012) Douglas G. Howe et al. NUCLEIC ACIDS RESEARCH
- KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters
- (2012) Akihiro Nakaya et al. NUCLEIC ACIDS RESEARCH
- Orthology prediction methods: A quality assessment using curated protein families
- (2011) Kalliopi Trachana et al. BIOESSAYS
- Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
- (2011) Torbjørn Rognes BMC BIOINFORMATICS
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics
- (2011) K. Megy et al. NUCLEIC ACIDS RESEARCH
- InterPro in 2011: new developments in the family and domain prediction database
- (2011) S. Hunter et al. NUCLEIC ACIDS RESEARCH
- A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches
- (2010) David M. Kristensen et al. BIOINFORMATICS
- Correlating Traits of Gene Retention, Sequence Divergence, Duplicability and Essentiality in Vertebrates, Arthropods, and Fungi
- (2010) Robert M. Waterhouse et al. Genome Biology and Evolution
- AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome
- (2010) F. Legeai et al. INSECT MOLECULAR BIOLOGY
- Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
- (2010) M. C. Munoz-Torres et al. NUCLEIC ACIDS RESEARCH
- BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
- (2009) Hee Shin Kim et al. NUCLEIC ACIDS RESEARCH
- SilkDB v2.0: a platform for silkworm (Bombyx mori) genome biology
- (2009) Jun Duan et al. NUCLEIC ACIDS RESEARCH
- Algorithm of OMA for large-scale orthology inference
- (2008) Alexander CJ Roth et al. BMC BIOINFORMATICS
- McKusick's Online Mendelian Inheritance in Man (OMIM(R))
- (2008) J. Amberger et al. NUCLEIC ACIDS RESEARCH
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started