Quantitative and qualitative assessment of pollen DNA metabarcoding using constructed species mixtures
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Title
Quantitative and qualitative assessment of pollen DNA metabarcoding using constructed species mixtures
Authors
Keywords
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Journal
MOLECULAR ECOLOGY
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2018-08-17
DOI
10.1111/mec.14840
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Note: Only part of the references are listed.- Scaling up: A guide to high-throughput genomic approaches for biodiversity analysis
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- (2016) Karen L. Bell et al. GENOME
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- (2014) Ken Kraaijeveld et al. Molecular Ecology Resources
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