Quantitative evaluation of bias in PCR amplification and next-generation sequencing derived from metabarcoding samples

mPUMA: a computational approach to microbiota analysis by de novo assembly of operational taxonomic units based on protein-coding barcode sequences

(2013) Matthew G Links et al.   Microbiome

Bioinformatic challenges for DNA metabarcoding of plants and animals

(2012) ERIC COISSAC et al.   MOLECULAR ECOLOGY

The Chaperonin-60 Universal Target Is a Barcode for Bacteria That Enables De Novo Assembly of Metagenomic Sequence Data

(2012) Matthew G. Links et al.   PLoS One

pcrEfficiency: a Web tool for PCR amplification efficiency prediction

(2011) Izaskun Mallona et al.   BMC BIOINFORMATICS

Factors influencing the accuracy of measurements with real-time PCR: The example of the determination of processed animal proteins

(2011) Christoph von Holst et al.   FOOD CONTROL

Two alleles of rpoB and rpoC1 distinguish an endemic European population from Cistus heterophyllus and its putative hybrid (C. × clausonis) with C. albidus

(2011) Marta Pawluczyk et al.   PLANT SYSTEMATICS AND EVOLUTION

Accurate and objective copy number profiling using real-time quantitative PCR

(2010) Barbara D’haene et al.   METHODS

Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

(2010) ANTHONY S. AMEND et al.   MOLECULAR ECOLOGY

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

DNA-based species level detection ofGlomeromycota: one PCR primer set for all arbuscular mycorrhizal fungi

(2009) Manuela Krüger et al.   NEW PHYTOLOGIST

A DNA barcode for land plants

(2009) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Real-time PCR quantification using a variable reaction efficiency model

(2008) Adrian E. Platts et al.   ANALYTICAL BIOCHEMISTRY

qpcR: an R package for sigmoidal model selection in quantitative real-time polymerase chain reaction analysis

(2008) C. Ritz et al.   BIOINFORMATICS

Highly accurate sigmoidal fitting of real-time PCR data by introducing a parameter for asymmetry

(2008) Andrej-Nikolai Spiess et al.   BMC BIOINFORMATICS

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols

The impact of next-generation sequencing technology on genetics

(2008) Elaine R. Mardis   TRENDS IN GENETICS